Abig008107.1
Basic Information
- Insect
- Agrilus biguttatus
- Gene Symbol
- dmd-4
- Assembly
- GCA_963921985.1
- Location
- OY998120.1:34569763-34573461[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-25 2.1e-21 75.8 11.6 1 47 9 55 9 55 0.98 2 2 0.035 2.5e+02 1.9 1.1 29 35 244 250 242 253 0.88
Sequence Information
- Coding Sequence
- ATGTTGTCAAATGGTCGATCGTCAAGGGTTCCAAAGTGTGCCCGATGTAGAAATCACGGAATGATTTCCACCCTGAGGGGTCACAAGaaacagtgtatatataaaaattgtaattgcgCTAAATGCAGTTTAATCAAGGAGCGACAAAGGATAATGGCAGCACAgGTTGCCTTGAAGAGGCAGCAGGCAGCTGAAGACGCCATAGCTCTCCACCTGGCCTCTGCAGAAAGCGGTACCACATATGACTATTTACCCCCCGGTAGGATTTACGGAATGCAAGTAACTTCACCTGAAACATCAGAAACTTCGGAAACGACCACCACATTAGAAGGAAACAAGGACGACCCAGCATCACCCCCACAAAACGAAGAAATCACAGTAAGCCCTGCATCGATAGATATGCTCAGCAAATTGTTTCCTAATAAAAAGAGGGCGGTTTTGGAACTGGTACTGAAACGTTGCAATCATGATCTCCTCAAAGCCATTGAACACTTTAACGAAAATCAAACGTCGCACAACTTCATCGATGAGATTCACAGTCAAAAGGAGGACTTCAGTTCCGCTTTTAAACCGGTGTTTACAAAAAATAGTCCCATAGGAGGTCTTCATCAAGGTCCAGTACCTTTCATATCTGGTAGCAAAGTATTCATGCACGGATTGTATCCGTTTCTACCTTTTTTTAATCCTCAACCTGTACTACCAAGTCCTGTGGCTTATGTACCTGGTATTTGTGAATGTGACCAATGCAAACATGGGTTTTATCCACGAAATGATTCCAGACCATGA
- Protein Sequence
- MLSNGRSSRVPKCARCRNHGMISTLRGHKKQCIYKNCNCAKCSLIKERQRIMAAQVALKRQQAAEDAIALHLASAESGTTYDYLPPGRIYGMQVTSPETSETSETTTTLEGNKDDPASPPQNEEITVSPASIDMLSKLFPNKKRAVLELVLKRCNHDLLKAIEHFNENQTSHNFIDEIHSQKEDFSSAFKPVFTKNSPIGGLHQGPVPFISGSKVFMHGLYPFLPFFNPQPVLPSPVAYVPGICECDQCKHGFYPRNDSRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00031972;
- 90% Identity
- iTF_00031972; iTF_00031074;
- 80% Identity
- -