Abig017278.1
Basic Information
- Insect
- Agrilus biguttatus
- Gene Symbol
- LAC
- Assembly
- GCA_963921985.1
- Location
- OY998126.1:6972172-7015195[+]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.025 2.7e+02 1.9 0.0 41 96 49 104 30 110 0.79 2 2 1.4e-08 0.00015 22.1 0.0 30 90 142 202 137 217 0.83
Sequence Information
- Coding Sequence
- ATGGAAACGCAGGGGGTGGAGGAGAAAACTAGAAGTGGTAACTCTATGAGGTTGATGGGCCCAAATGTTGGAAGAGGGGAAAGAGTACAAGACAGAAATCCAGTTTTTAATGCTCCCATATCCAACGTGACAGTTTCTGTTGGAAGGGAAGCGATCTTAGAATGCGCCGTCAATAATTTGTCATCATTTAAGgtGGCTTGGCTGAGGGTGGATACTCAAACCATTCTCACTATTCACGGTCATGTAATTACCAAGAACCATAGGGTGGCTGTATCGCACAGTGATCACAGGATATGGTATTTGCACATAAGGGATGTCAGGGAATCGGATCGAGGTTGGTACATGTGTCAAATCAATACTGAACCTATGATCAGCCAGGTTGGATTTGTCAACGTTGTTGTACCGCCTGACATCTTGGACCACCCTACAAGTAGCGACATGGTCGTCAGAGAAGGATCAAgtgtaatattaaaatgtgCTGCTACCGGATATCCTAAACCAAACATAGTATGGAAACGAGAGGAAGCTAAGCCAATACTCTTAGACGCTGGAGATGAAGTTTCATTGGTGGAGGGCGGCGAGTTCCATTTGAACCGGGTCACTAGACTGCATATGGGACCCTACCTCTGTATTGCCTCCAACGGTGTACCGCCCACGGTCAGCAAAAGAATCATGCTAATAGTCCAGTTTCCGCCGATGATTTGGATTCAAAATCAACTAGTTGGTGCCAGCGAAAGGCAAGAAGTCACCCTAGAATGTTACTCCGAGGCCTACCCTAAATCCATAAACTACTGGACAAAAGACGATGGTCGTATCATTACCCAAGGAGCAAAATACGAGCCGCACATGGACGACAATGCATACAAAGTGCACATGAAATTGACAATTCGAGCGGTGAGCGCAACCGATTTCGGATCTTACAAGTGCATCTCGAAGAATTCCTTGGGCGAAACAGATGGCACCATAAAACTTTATCATCAGGGCCGAGCAGCTCGGCTCCTAAGAGCCAGCGGCTCCTGCGAGCCGAGCCGAGAGCTCCCGAAAGTCGAAGAGGAAACAATTGAAAGGCGAAGGAGAAGTTGTAACTCTGCCCCACTCCtcgaccaaacagaattaataGAATGA
- Protein Sequence
- METQGVEEKTRSGNSMRLMGPNVGRGERVQDRNPVFNAPISNVTVSVGREAILECAVNNLSSFKVAWLRVDTQTILTIHGHVITKNHRVAVSHSDHRIWYLHIRDVRESDRGWYMCQINTEPMISQVGFVNVVVPPDILDHPTSSDMVVREGSSVILKCAATGYPKPNIVWKREEAKPILLDAGDEVSLVEGGEFHLNRVTRLHMGPYLCIASNGVPPTVSKRIMLIVQFPPMIWIQNQLVGASERQEVTLECYSEAYPKSINYWTKDDGRIITQGAKYEPHMDDNAYKVHMKLTIRAVSATDFGSYKCISKNSLGETDGTIKLYHQGRAARLLRASGSCEPSRELPKVEEETIERRRRSCNSAPLLDQTELIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -