Basic Information

Insect: Agonum fuliginosum
Gene Symbol: Rreb1
Assembly: GCA_947534325.1
Location: OX384032.1:4485833-4494748[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00024 0.034 16.0 0.6 1 23 102 124 102 124 0.98

2 16 0.00027 0.039 15.9 0.3 1 23 136 158 136 158 0.98

3 16 5.1e-06 0.00072 21.3 4.0 1 23 164 186 164 186 0.99

4 16 1.8 2.6e+02 3.8 0.1 1 23 266 290 266 290 0.88

5 16 0.086 12 8.0 2.9 2 23 296 318 295 319 0.94

6 16 0.12 16 7.6 0.4 1 21 373 393 373 394 0.94

7 16 0.1 14 7.8 0.1 1 23 532 554 532 554 0.96

8 16 9.2e-06 0.0013 20.5 0.7 1 23 564 586 564 586 0.99

9 16 0.0012 0.16 13.9 3.1 1 23 592 615 592 615 0.97

10 16 0.00099 0.14 14.1 2.8 1 23 1008 1031 1008 1031 0.96

11 16 0.0015 0.21 13.6 1.4 2 23 1305 1326 1304 1326 0.97

12 16 0.12 17 7.5 4.2 1 23 1332 1355 1332 1355 0.96

13 16 0.15 21 7.3 4.0 1 20 1386 1406 1386 1410 0.94

14 16 1.1 1.6e+02 4.5 0.4 1 23 1481 1504 1481 1504 0.94

15 16 0.023 3.2 9.8 0.5 3 23 1554 1574 1552 1574 0.93

16 16 0.004 0.57 12.2 5.5 1 23 1580 1602 1580 1602 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00024	0.034	16.0	0.6	1	23	102	124	102	124	0.98
2	16	0.00027	0.039	15.9	0.3	1	23	136	158	136	158	0.98
3	16	5.1e-06	0.00072	21.3	4.0	1	23	164	186	164	186	0.99
4	16	1.8	2.6e+02	3.8	0.1	1	23	266	290	266	290	0.88
5	16	0.086	12	8.0	2.9	2	23	296	318	295	319	0.94
6	16	0.12	16	7.6	0.4	1	21	373	393	373	394	0.94
7	16	0.1	14	7.8	0.1	1	23	532	554	532	554	0.96
8	16	9.2e-06	0.0013	20.5	0.7	1	23	564	586	564	586	0.99
9	16	0.0012	0.16	13.9	3.1	1	23	592	615	592	615	0.97
10	16	0.00099	0.14	14.1	2.8	1	23	1008	1031	1008	1031	0.96
11	16	0.0015	0.21	13.6	1.4	2	23	1305	1326	1304	1326	0.97
12	16	0.12	17	7.5	4.2	1	23	1332	1355	1332	1355	0.96
13	16	0.15	21	7.3	4.0	1	20	1386	1406	1386	1410	0.94
14	16	1.1	1.6e+02	4.5	0.4	1	23	1481	1504	1481	1504	0.94
15	16	0.023	3.2	9.8	0.5	3	23	1554	1574	1552	1574	0.93
16	16	0.004	0.57	12.2	5.5	1	23	1580	1602	1580	1602	0.98

Sequence Information

Coding Sequence: ATGCGCGACATCGCGTCCCCCAGCTCCAGTCCGCCCGGCCCATGCGCCAGCCGCTCTCCGCAACCCGCCGAGCCCGCCGTAATCACCATGGATGATTCGCTCAACAATACCAAAGATAGCCAAAGAAAAAATGACACAGAAGAAAGTATGCTTGAAAGCAGTTCTGCTTTGTCCGACAATCTTCAGGATACAATATCTACTCATGATTCGGATGTAGAGCCCATGGACATCAGCAATAAAACAACAACCACACTTGACAGCGATAATAATAGCGACTGTAGCTCTCCTAGCAATCCCACTAAATATTTTTGCCCGATTTGCGACATCACCCTCATCTCTCAACATGATTTCACAGTGCACATTCGCAACCACAATAACGATAATGAAATCATTTCCGAGAAAGGCTTTACTTGCCGTATTTGCTCAAAAGTGCTAAGTTCCAGTTCAAGTCTGGACAGGCATGTCCTTGTTCACAGTGGCGAACGACCTTTTCGCTGTAAAATATGTTCAGTGACTTTTACAACAAATGGAAATATGCATCGACATATGAGGACTCATTCACAAAAGACTGGAGAAAATTATGAATCTGATGCAAGTACCGATAGTAATACTAGTGTTAGTTCAAATGGAAAAACAAGAAAACGTAGATTAGAATTTAATAATAACAAGTTAGTAGATAACAGCAATAAAAGAAAATCCGATTGTTTTATCAACGAAGACGATGATAACTATATGCATCGTAGAAAATCAAAGAACTTTAATAATAATAACAATAATGAATTGAATACACAAAAATATCATTGTCCTGTTTGTGACCGGGAAGATTTCGCTTCATTAAACGTATTAGAAACCCACCTTGAAGTCAATCATCCTGATTTTGAAGTTAAATGTGTTTCTTGTAATTTGAGCTTCAAAAATCACCGTGCCTTAAATCTGCACCGAGATATGGTTCATCATTCTGAACAGCTGCATAATACTAGTAACAACAAAAATATTAAAAATGCTCACATTGGATTTAAAGATTTGACCTTTGTTGATTTTTCTAGTAATAAATTTCCACACATTGCTCGTTATGAATGTGAGAAAAATTTGCACAAACCAGTAACAGGACAAAAATTTATTTGCGACAAATGTTCTAGAGCATTTCCTTGTTCGAGTGCTTTAGAAATGCATCAGAATGAGTGCTTGAAGAATAAATTATCAAAAACTGAATTGGAATTTCCGACAGATTTGTCCCGAAAAATTATACATGAAGAAGATATGCAACGAGAAAACTTTTTTGCACGATTAGATTTACAAAACAAATCAGGTACCACCTCGCCAGTTTCTCCAGCTACTGTAAATGGAGAACCTAAACTTCAAGACAATAGACTTTCAGTTAAATCTTCAATAGATTCTAAAGATTTAGCTGATATTCAGTCTATATTGTCCATGACTTCAAATGGAAGTTTATTGCAACATTTAAGAACTAAGCCAGCTTCTGAATTAATACCTCTGTCAACAGAAAATTTGAGAACTTCAGAACAGCATCATGAGGAAGAAACGCAAGATGCATTTGCTGCGGAATTTAGGAAAATGAAATTACGAGGAGAATTTCCCTGTCGACTTTGCACAGCTGTGTTTCCTAATCTTCGAGCATTAAAAGGTCACAATCGTGCACATTTGTCTGGAAATGGCAATTCTGGACCATATCGTTGCAATATGTGCCCTCATAGTTCCGTGGATAAAGCTGCTCTAATTCGACATATGAGAACACACAATGGCGATAGACCGTATGAATGTTCACTTTGTAACTATGCTTTTACAACGAAAGCTAACTGTGAAAGGCATTTAAGGAACAGACATTCTAAAGTTACTAGAGAAGAAGTTAAAAAATCAATTATTTATCATCCTTCAGAGGACCCCACAAATGATGAAATTAATAAGATTAATCCGTCTCGTAATGAAATAAAAAATAACTTATTAAATGTTTCGAATGATGATGATTTACATGTCACTGATAGAGTACTAAGTACTACATCTACTCCAGATCATAAAAATATTATTGTTCCTGGCATTACAATTCCTCCAACTATAATGAATAAAGGTTTATCAATAAATCGGTCAATAATTGCTGAACATTTTAATAAAGACAATATACTTAGTGCAAAAGATCAGAAAATTACTTCAAAAGATCTTAAAAATGATTATGTACATCCTGATCATGGGAGATTTAATTATTCACCTGATTTATCTGATAAAATCAAGGAAGACTTGATTCATTCTAAAATAAAAGTAAAAAATTTAGATGGTTTAAAACAAATTCCTGATTATGACATTCATTCAGAAGGAGAGGAAACAAATAATAACACGTCATCTAGTTTTGAACATTATTCAAAATCAACAAGAGAACATCCTATAGATTTAAGCATGGATGTTCTAGATTTGAGTAAAAAGAAAGAATCTCCATCTAAAACTGATAACGAACCTCAAGATTTCACCAAGAAAACTTTAGAATCAACTGCAACTATTCCGCCACCTCCGACACCCGCTCAGATATTACTGGCACAACAATTATTAAAAAATCCATACATGAATCATTTATCTCAATTTTATCAAAATCCTGCTCTTTTTCCTAATTTACCAAATATAAATCTACAACCTAACATTTTTCCATTTTTATTTCCACCACCTTTCTTAAACACACAAGAAATGAGAGAGAAAATGCTTCGCTTACAATTGAGTGGAGGAACTATGATAAGTGAACAATTCTCACCTGGTCCACCAAATGGTATGCAATCATTTCACCAAGATTTGTCGAATATTTCTGAAATGAAGTACCCTATAACAAAACCAGAAGAACAAAAATCTCCTCTTCATATAAACACCCAACTTTCCGATAATATCACAAAATTACAGTCTCCAAAACCACAACAGAAAACACCTGATATGATGCATAGTCCAAATTCTGTAAAAATGGTTATTAAGAATGGTGTTTTAATGCCAAAGCAAAAGCAGCGACGTTATCGTACTGAAAGACCTTTCTCATGTGAACATTGTTCAGCAAGATTTACTTTGAGATCCAATATGGAAAGACATATCAAACAGCAGCATCCACAGTTCTGGTCTCAAAGGCAACGAGCTGGTATGAGTGGTGCAGGACGAAAACCAATCAACGCACCTGCAACCAACATACAAAATAGTACCAAGCCCCCGTTTTACGACTTAAACATTCCTAATTATGACATGCATATACCAAAGATGCAAGATCCCGTAGTCTCCGAAACCAAAGATAAAGAATTAAGCATAGCTCACCAACATACGCTCATTTCTCAACATGTAAAGTATGCATTATTAGCTCAGCAATTAAAAGCTCGCAGTAATGAAAACAATAATTCATCAGTCACGAAAGAGCGCACTCCGCAAGATGATGATGAAGATGCGTTAATTATTGATGAAGAAAATGATGATGAGAAACCTCCAAAATATGAAACCAAAGAAACTACAACAGAAATTAATAGTAAAGATAATGAAAATAAATCTAAATCACTAGATGAAAAAATGCTTGAATTACGCCAAATGCGTGAAAAAGAAATAAAAAGTAACGAAAAATTACAACTAAATGTGGCTGAAACTGGTTTATTAAAATTAACAAAATCTGAAGAAACAGGTCAAGATCTGGTATCAGTTTCAAGACTGCTCGACAATGCAGTAAGCACACAGTTACCATTCCGTGAATATTTTCGTCGTGATGGAGAAGATAACGAGATAGAAGGTGTGAGCGAAGAAGATGAAGAAGGATTAGTTGCAAGTGGAAGTACTAGTGAAGGCAATGGATCTGGCAGTGACGAAAATAAATCAGAAAATGAAACTGCACCAACTACTGAATCCGGAAAGAAAAGATCTGCCTACTCGTTAGCTCCGAACCGTGTGAGCTGCCCTTACTGTCATCGTAAATTTCCATGGACCTCATCTCTTCGGCGTCATGTGCTAACACATACCGGTCAAAAACCGTTCAAGTGTTCTCAGTGTCCACTTTTATTTACTACGAAGTCAAATTGTGATCGACATTTACTTCGGAAACATGGAAATGCTGTAAATTCTAATTCTGAATCGTCAAACAATAATAATAACAACAGCCAAAACTACATGATGAGAAATGTCCCAGAGAGACCATATAAATGTTCAAGCTGCCCTAGTTCAACATTTTCCACTCTTAGCAATCTCAAAAAACATATGTCTTGTAAACACACAATTGTTTCCTCAAATGTAGACAGTTTTAAATGCGACGACGCTAGGCCACCAAGTAGAGAATACGAGAGTGTAGCAAGTTCCGAAGATGAACGGGTTAATAAACCATCCAGCGATAACAAAAGCGACTGGGAAAATCAAATTTCACATTCCAAAATACCAATACCTAATTCTGATCAGAATAGTGCTGTACAAAATGCTGATTTACCATTTAAGTGTCATTTGTGTGAAGGTTCTTACGCAGAGCGCCAGGATGCATTGGATCATATTCGAGACACGCATGTAGCTGAATATGAACTTTTGATGGCAAAAGGAGCATTGGATGCAAATACTTCTGGCCACGATGAAGCACACGTAGCTAACCACGATCCCGATGACGATGAACAACTTCGAGGAAAATTCCCGGATTATGCAAACCGTAAAGTGATGTGTGCGTTTTGTATGCGTAGATTTTGGTCTGCTGAAGATCTTCGACGTCATATGAGAACACATACCGGTGAACGCCCATTCTCCTGTGATGTCTGCAATCGTAGATTCACTTTGAAGCACAGTATGTTGCGACATCGAAAAAAACACAACCTGACAACAAACTCATTAGAAGATGGCGTTTTAGCCAGCGGAGATGAAGAAGTAAATTCTTCGCAAACAACATATGAGAAATTTACTAAAATAAATAACAATAATAATCTTGTACCCGGAAATATCGTGAGAGATAAAACAGCAGAAAAGTCTAGTGGCGAAGATTCTGAAGGCACTGAAGGAAATGATTTAATTGGAAATTTACTTGGAATTAGAGATAAGTCAATTATCGACCAAGTATTGGTTTCATCTGCTGATGATGCAGCAAAATTATTGGGTGTTAATAATGGCCAAGAATAG
Protein Sequence: MRDIASPSSSPPGPCASRSPQPAEPAVITMDDSLNNTKDSQRKNDTEESMLESSSALSDNLQDTISTHDSDVEPMDISNKTTTTLDSDNNSDCSSPSNPTKYFCPICDITLISQHDFTVHIRNHNNDNEIISEKGFTCRICSKVLSSSSSLDRHVLVHSGERPFRCKICSVTFTTNGNMHRHMRTHSQKTGENYESDASTDSNTSVSSNGKTRKRRLEFNNNKLVDNSNKRKSDCFINEDDDNYMHRRKSKNFNNNNNNELNTQKYHCPVCDREDFASLNVLETHLEVNHPDFEVKCVSCNLSFKNHRALNLHRDMVHHSEQLHNTSNNKNIKNAHIGFKDLTFVDFSSNKFPHIARYECEKNLHKPVTGQKFICDKCSRAFPCSSALEMHQNECLKNKLSKTELEFPTDLSRKIIHEEDMQRENFFARLDLQNKSGTTSPVSPATVNGEPKLQDNRLSVKSSIDSKDLADIQSILSMTSNGSLLQHLRTKPASELIPLSTENLRTSEQHHEEETQDAFAAEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLSGNGNSGPYRCNMCPHSSVDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHSKVTREEVKKSIIYHPSEDPTNDEINKINPSRNEIKNNLLNVSNDDDLHVTDRVLSTTSTPDHKNIIVPGITIPPTIMNKGLSINRSIIAEHFNKDNILSAKDQKITSKDLKNDYVHPDHGRFNYSPDLSDKIKEDLIHSKIKVKNLDGLKQIPDYDIHSEGEETNNNTSSSFEHYSKSTREHPIDLSMDVLDLSKKKESPSKTDNEPQDFTKKTLESTATIPPPPTPAQILLAQQLLKNPYMNHLSQFYQNPALFPNLPNINLQPNIFPFLFPPPFLNTQEMREKMLRLQLSGGTMISEQFSPGPPNGMQSFHQDLSNISEMKYPITKPEEQKSPLHINTQLSDNITKLQSPKPQQKTPDMMHSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQFWSQRQRAGMSGAGRKPINAPATNIQNSTKPPFYDLNIPNYDMHIPKMQDPVVSETKDKELSIAHQHTLISQHVKYALLAQQLKARSNENNNSSVTKERTPQDDDEDALIIDEENDDEKPPKYETKETTTEINSKDNENKSKSLDEKMLELRQMREKEIKSNEKLQLNVAETGLLKLTKSEETGQDLVSVSRLLDNAVSTQLPFREYFRRDGEDNEIEGVSEEDEEGLVASGSTSEGNGSGSDENKSENETAPTTESGKKRSAYSLAPNRVSCPYCHRKFPWTSSLRRHVLTHTGQKPFKCSQCPLLFTTKSNCDRHLLRKHGNAVNSNSESSNNNNNNSQNYMMRNVPERPYKCSSCPSSTFSTLSNLKKHMSCKHTIVSSNVDSFKCDDARPPSREYESVASSEDERVNKPSSDNKSDWENQISHSKIPIPNSDQNSAVQNADLPFKCHLCEGSYAERQDALDHIRDTHVAEYELLMAKGALDANTSGHDEAHVANHDPDDDEQLRGKFPDYANRKVMCAFCMRRFWSAEDLRRHMRTHTGERPFSCDVCNRRFTLKHSMLRHRKKHNLTTNSLEDGVLASGDEEVNSSQTTYEKFTKINNNNNLVPGNIVRDKTAEKSSGEDSEGTEGNDLIGNLLGIRDKSIIDQVLVSSADDAAKLLGVNNGQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01275656;
90% Identity: -
80% Identity: -