Aful011929.1
Basic Information
- Insect
- Agonum fuliginosum
- Gene Symbol
- bab1
- Assembly
- GCA_947534325.1
- Location
- OX384035.1:21932354-21938722[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-17 3e-14 53.9 0.0 1 43 28 71 28 73 0.95 2 2 4.4 3.7e+03 -0.8 0.8 6 15 154 163 152 169 0.87
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACACCAACCAATCCCTCGTGCACAACCTGAGGTTTCGCGAACGAGGCCCTCTCAAGTCCTGGCGGCCTGAGACGATGGCCGAGGCCATCTTCTCAGTGCTCAAGGAGGGTCTGTCCCTGAGCCAGGCGGCTAGAAAATACGACATTCCCTACCCGACGTTTGTGCTCTACGCGAACAGAGTCCACAACATGCTGGGCCCCAGCGCCGATGGAGGCGCGGACCTGAGACCGAAGGGCCGAGGCAGGCCACAGAGGATTTTGCTCGGCGTTTGGCCCGATGAACATATAAGAGGGGTTATCAGAGCGGTTGTGTTCAGAGATACGCATCATATTAAAGAGGAGCCACAACATCTTGCCTACCAGCGAATGCATGAAGGCTACGTGTCCACCACCCCAGGCAGCAACGGCCCAGAACCCACAGTATCCCCTGGAGCAGCAGCCGCCGCAGCCGTGGCCGCGGTAGCCCAAGGCCTGCGCCAGCAGATGTGCTCCATGGTGGCGGCAGCGCAGCACCAGTCCTCTAGCGACACCAACCCCGTGGCTTCCCTCGTCAACTCGCTAGCGTACATGGGCCCCAGCAACGGGGCGCTGCTGCGCGGGCTGGCCGCCTCGCCCGCCGAGGACCTGCGCATGACCAGCCCCGCCGGCTCTGCCCTCGACAGCCCCCTGGCCTCGCCGCTGGGCATGCTGGACCGCAGCGGCAGCGAGCACTCCGCGGCTAACATGAGTCTGCTGCCCCCTCAAGTCGAGGTCGGCATCGGCATGGCGTATAAACCTGCCAGGGCGTATAGCTCGCCGAGGCCTGAGAATCTCTTCCAGGAGGACATCGACGAAATCGTGAAACCCATGCAGCTCACCGCCACAGCCACCGCGACAGCAGCGGGCAAGGAGCCCCCCGGCCATCCGCACGCGCACGCGCACTCGCACCCAGTGCTGCCCCCCATCAAGGTGGAGCCCCTCACGACGGAGTGTCGAGGTGACTAA
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHHIKEEPQHLAYQRMHEGYVSTTPGSNGPEPTVSPGAAAAAAVAAVAQGLRQQMCSMVAAAQHQSSSDTNPVASLVNSLAYMGPSNGALLRGLAASPAEDLRMTSPAGSALDSPLASPLGMLDRSGSEHSAANMSLLPPQVEVGIGMAYKPARAYSSPRPENLFQEDIDEIVKPMQLTATATATAAGKEPPGHPHAHAHSHPVLPPIKVEPLTTECRGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01275169;
- 90% Identity
- iTF_00469547;
- 80% Identity
- -