Basic Information

Insect: Agonopterix heracliana
Gene Symbol: -
Assembly: GCA_963693445.1
Location: OY856334.1:548709-550283[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0064 0.44 11.8 0.4 2 23 164 186 163 186 0.92

2 10 2 1.3e+02 4.0 0.7 1 23 192 214 192 214 0.75

3 10 0.096 6.6 8.1 0.5 2 23 221 242 220 242 0.94

4 10 0.00022 0.015 16.4 0.2 1 20 247 266 247 268 0.92

5 10 4.2e-06 0.00029 21.8 1.2 2 23 289 310 288 310 0.96

6 10 0.00042 0.029 15.5 3.1 1 23 317 339 317 339 0.97

7 10 1.1e-05 0.00077 20.5 1.3 1 23 345 367 345 367 0.96

8 10 0.00015 0.01 16.9 2.0 1 23 373 395 373 395 0.95

9 10 0.001 0.07 14.3 2.8 1 23 401 423 401 423 0.98

10 10 2.3e-06 0.00016 22.6 0.9 1 23 429 452 429 452 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0064	0.44	11.8	0.4	2	23	164	186	163	186	0.92
2	10	2	1.3e+02	4.0	0.7	1	23	192	214	192	214	0.75
3	10	0.096	6.6	8.1	0.5	2	23	221	242	220	242	0.94
4	10	0.00022	0.015	16.4	0.2	1	20	247	266	247	268	0.92
5	10	4.2e-06	0.00029	21.8	1.2	2	23	289	310	288	310	0.96
6	10	0.00042	0.029	15.5	3.1	1	23	317	339	317	339	0.97
7	10	1.1e-05	0.00077	20.5	1.3	1	23	345	367	345	367	0.96
8	10	0.00015	0.01	16.9	2.0	1	23	373	395	373	395	0.95
9	10	0.001	0.07	14.3	2.8	1	23	401	423	401	423	0.98
10	10	2.3e-06	0.00016	22.6	0.9	1	23	429	452	429	452	0.97

Sequence Information

Coding Sequence: ATGAGTGCCGTCAATTCTTACTGCCGATTGTGCGCCGCACTAAAAACTCTCGACAAACTTATTGATTTAAAACAGGACGAGAACAAACGTCGAGAAATCGTTGAAAAACTGACTCGTATATACCCTGGTATTGACTTTACGGACGATGCATTGCCAAAAACTGTGTGTCTAGTTTGTGTAAGCTTTCTAGATAAAGCCTTTGACTTCGTCCTCGGTATAGAACAAGCGCAGGGAGCTTTAACCGACCTACTTTTAGttcaagaaataaaaaaagaggCTCAAGAATCAGAATTTTCCGATGACGATTTCCCGTCCGATCCACCAGAAATCAAAGACGAAAATGTCGACGTTAAAAGCGAAGCAGAAGACGTCGAACCCCAGAAAGTTAGAGAGAGATGCAAAACGAAACATAAAAGAAAACGTACTGATTTCAGCTTAGACGCAATCCCTCTATCGCAATTGAAGTTATCGTGGAAGGAATATTTTTGGACGTGTTCGTATTGCGAAACTCAGTTCCCCAACATAGACGAACTGCGATCACATTCGATGCAGTTCCACGATTGCTGCAACTCGTATCGATGCACAGATTGTAATATTAGAAAACTCCGCCTGGATAGCTTTCTCATCCACGTGCAACGACATAGAAAATATCTTAAATCATCCTGTTATAAGTGTGACGAACATTTTATATCGTTAACGGAAGCTAACGCGCACAAAGCGGTtcacaaaaacacaaaacacaTATGCCCTGGTTGCAACACAACTTTTCCGAGCTCTGAGGAGCTACAGCAACATTCTTCTACGTATTACCAGGCTCAAAAATCAAGAACGATAAAGCTACAAACAAGTATAACAGACAATCTCACTTGTGTCATATGTAAGAAGACGTTCAAACACAAAGGGACTTTAAATGCACACATTTTAATACATACGGAGAGAAAACGAGATCACACGTGCGATAAATGCGGCAAATGCTTCCTAAACAAGCAAAACTTAGCTGGCCATATGATTCTGCACGATAATGTACGGCCTTTCCAGTGCGAAATCTGCAAGGCGTGCTTCAAAACACAGGGCCAACTGCGAAATCATGTCGGAGTGCACGATAATAAAAAGCCGTTCGCTTGCGAGCAATGTGGACGATGTTTCCGACTGCAGAAACAACTGACTTCGCATAGTATAATTCATACAGACTCTATGCCATACACATGCTCGTTTTGTAACAAAGGTTTTCGCTTCAAAACTATTTTAAATCAACACATACGACAACACACTGGAGTAAAACCGTATGCTTGCGAAATATGTCAGCGAGATTTCACGAATTGGCCGAATTATAACAAGCATATGAAACGTAGGCACGGTATGGATATGGCGAAGAAGAAGCACACGCCAGACGGAGTGTACCCGATTAACCCGGCAACGGGTGAAGTTATTATTTACCCACAAACGAATAAAACTGTAGAGTGGAAGAAGCAGTTGCTGCGTCAAAGAAGGCCGGGGCGGCCAAAGGTGGCGCTCAAAACTGAGGAGCCGGTAGAAAATAAGAGTACAGAAAATCAGAGTGAAataagtcaatga
Protein Sequence: MSAVNSYCRLCAALKTLDKLIDLKQDENKRREIVEKLTRIYPGIDFTDDALPKTVCLVCVSFLDKAFDFVLGIEQAQGALTDLLLVQEIKKEAQESEFSDDDFPSDPPEIKDENVDVKSEAEDVEPQKVRERCKTKHKRKRTDFSLDAIPLSQLKLSWKEYFWTCSYCETQFPNIDELRSHSMQFHDCCNSYRCTDCNIRKLRLDSFLIHVQRHRKYLKSSCYKCDEHFISLTEANAHKAVHKNTKHICPGCNTTFPSSEELQQHSSTYYQAQKSRTIKLQTSITDNLTCVICKKTFKHKGTLNAHILIHTERKRDHTCDKCGKCFLNKQNLAGHMILHDNVRPFQCEICKACFKTQGQLRNHVGVHDNKKPFACEQCGRCFRLQKQLTSHSIIHTDSMPYTCSFCNKGFRFKTILNQHIRQHTGVKPYACEICQRDFTNWPNYNKHMKRRHGMDMAKKKHTPDGVYPINPATGEVIIYPQTNKTVEWKKQLLRQRRPGRPKVALKTEEPVENKSTENQSEISQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00027139;
90% Identity: iTF_00027139;
80% Identity: -