Basic Information

Gene Symbol
ZFX
Assembly
GCA_963693445.1
Location
OY856326.1:690100-696493[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 1.5 1.1e+02 4.3 2.2 1 23 248 270 248 270 0.91
2 21 4 2.8e+02 3.0 0.1 6 23 282 300 282 300 0.93
3 21 2 1.4e+02 3.9 0.5 2 23 309 331 309 331 0.95
4 21 0.00078 0.054 14.7 2.1 3 23 353 373 351 373 0.95
5 21 0.00082 0.057 14.6 3.6 1 23 379 402 379 402 0.94
6 21 0.14 9.6 7.6 0.1 1 19 408 426 408 430 0.78
7 21 0.00017 0.012 16.8 4.8 1 23 436 458 436 458 0.98
8 21 0.00032 0.022 15.9 1.9 3 21 466 484 464 485 0.95
9 21 0.1 7.2 8.0 3.2 1 23 590 612 590 612 0.96
10 21 6.8e-05 0.0046 18.0 2.0 2 23 619 641 618 641 0.92
11 21 1.5e-06 0.00011 23.2 3.1 1 23 647 669 647 669 0.98
12 21 3e-07 2.1e-05 25.4 1.6 1 23 675 697 675 697 0.98
13 21 0.0005 0.034 15.3 1.1 1 23 703 725 703 725 0.98
14 21 8.1e-05 0.0056 17.8 5.0 1 23 731 753 731 753 0.96
15 21 0.0002 0.014 16.5 1.4 1 23 759 782 759 782 0.97
16 21 0.89 61 5.0 0.9 2 23 849 869 848 869 0.95
17 21 7.5e-06 0.00051 21.0 0.3 1 23 875 898 875 898 0.96
18 21 1.2e-05 0.00086 20.3 8.0 1 23 904 926 904 926 0.98
19 21 1.7e-05 0.0011 19.9 0.2 1 23 932 954 932 954 0.98
20 21 7.1e-05 0.0048 17.9 0.4 1 23 960 982 960 982 0.97
21 21 0.00064 0.044 14.9 1.0 5 23 991 1009 989 1009 0.96

Sequence Information

Coding Sequence
atgaacAACGAAACTGAGCAAATATTCCTCCTGAATCCAGAAAACCAATCTCCAAGTGTATCACAGAAAATCATCGAAATTCCCACTACAGTTCCAGTTAACCTCGAgaATGTGGAAGACTTCTCAAATGTATGCCGGATATGTGCCACCGTCACAGAGTTTGTCATCCCCATATTTGAGGGGGAGGGCGCTCAGAACAACCTCGCTGATAAAATACACAAACACTTGCCCATTCAGGTGACCCCCTCGGACCAGCTGCCGCGCGCGGTGTGCTGCCAGTGCCTGCACACGCTGCTCGCGTGGCACGAGCTGGCGGCGTGCGCGGCGCAGGCGGACCGAGCGCTGCGCACGCGCCTGCACGTGCACAGGGCTGAACATGAACAGGAATCAAAATCAATAAGGAAAGAAGAATGCCAAAGTCTAGAAAATAAGGAACAGACAGAGTTGATTCCATTTGAGACCATAGTCAAAGATATATTGAAGGAATACTTGCATTCACTGAATATGAGAGAAGACCAAGACATCGAATTTGTATGTCAAAAGTGCAATGATCACCCCGGATCGTCATCTATGGAGGTTCTTACCCAACATCTACAGTTTTACCACCTTGTTGACATAAATGAATCTAACACGGAACAGTTTATAAAAAACTACGTCACTTTCGAGGAGCCGTTGACCCTAGATCTTGCACAAGATGACGATTCTGAAGAATCAGTAGCagacaaagtaacattaccAAACTTCTCTTGTCCTTTCTGCCAAAACGTATTTACGTCGACAAAGCGCCTCTTATTCCATCTCAGTAAACACGCGGAATTTAATATCGACCACGGAGTTATTTGTTGCGAAAACGTTTATAGCGACAAGATGTCCTTCGTAAAACACTTGCAGAATGACCATGAGGGTGGTGGTAACACAGCAAATACGTGTAGAAGCTGTGGCTTTGTCGGTGAGTCCATGAAAGAACTCAAATCCCACGTTACTACTACTCATGTCAGCAAGAAACGTGTCAAGAAGAAACACAGTCCAAATGACCAAAAATATATTCCCGTCAACTGTCCAGAGTGCAACAAAGTATTCTCCAACAAATATCACATGCTTTTCCACTTGAAGAGCCATTCGGAAACTACGAGATTCTTCTGCGATCAATGTGAAAAATCCTACAGTAACCAGGGGAACTTGTGTTATCATAAAAAGTTGGTTCATCAAGGTGTACTAAAGTTCACTTGTACGACATGTGGCGAAGCTTTCCCGAACCGGCTAGCGCGCGATTCTCACGCCCTACTCCATACTGGACTTAAACCCTTCACCTGCCGATATTGCCACAAATCATACCGATCGAAACAGACCCTAGATCGGCACATAGAAATGCACCTAGATATAAGAAAGTATGGATGTCATATTTGCCCAAAAAGATTCAGGAAGAGCACGCATCTGAAATATCACCTAAATGCCGTAAGCGTGGCAGAGTCTGACGACGAGCCTCTCTCTTCCATAGCTAATAAAAAAACTAACGATTTGTACAACAACTTCTATTCTGCACTTCTAAATTTTCGAAATCATTTTGTCTCTGGCCACGAAACAAATAACAGCCATCGAATTACCTCTGAAAGTGACTCTGAAGAAGTAGAGAATGAAGATGATGGTGAGACCAACCCTGACAATTTCGATGATTTAACTCAAAGTAACATGAGGaaagacagaatggacgaagaGACTCGAACGGAACTGAGTGAAGTACGAATCAAGATGAACGGCAAATTTTTCTACACTTGCAAAACATGCGGGAAGAATCTAAGTTCGCCGCACACGTACGTTTTTCACAAACGTATTCACACGGGCGAGCGTCCGTGCGTTTGTCACATCTGCGGCAAACAGTTCCGAGCGCCGAGCGGGCTGCAGCGGCACCTGACGGAAACGCACGAGAAACTGCGCCGGCACACCTGCCGCTACTGCCCGAAGAACTTCGCTAACTCACAGAACCTGAAACAACACATGAGGATTCACACCGGAGAGCGACCGTTCGTCTGCCCCCAGTGCGGGAAGAGGTTCACACAGAGCGGATCTCTGCACGTACATCTGAAGACGCACAGCGAACAGTTCCCGTATCATTGCGCAGAGTGCGGCGCCAAGTTTAGACTAAGATCAGGCCTAGCGAGGCACAGACTGAAACACACCGGAGAAAGACCCCACGTCTGCTCACACTGCGGGAAAGGGTTCCGGCAGAGACATGAACTGACGAGCCACGCTCTGTCCCACACGGACTCTAAACCTTTCACGTGTGTCATATGTGGGGCCGCGTTCAGACAACGAAGAGCGTTGAGACACCACAGTAAAAGACTACACGATAACGATCATAGAGGCGTCTCTACAGCGGTGACACGGGGATCCAATATGATGATCTACACTCACATCAATACCAATCAATATCAACAATTTAATTATATACGAAAGGAAAGATTCGAATTCGAACAACAAAACTCGGAAAGATCAGAAATAGCAAAACCCGACATAACTCTTCGAGAGGACGGCAAGAAATACGTATCATGTCAACAGTGCAAGAAGAGTGTGTTGATAAGTTCGTGGCGGCGGCACACGAGGTCGCACCGCGGAGAGAAGCGCTACAGCTGCCACACGTGCGGCCTCGGCTTCAGCGACAGCGGCAACCTGGCGCGCCACGCGAGGGCCCTACACTCCAACCAACGCCCCCACACCTGCCACATATGCACCAAAACGTTCTCCAGAAACAGCCACCTCCAAGATCACGTCAAATCTCATTCCGAAAGCAGAGAATTCGTCTGCGATCTGTGCGGAAAAGCTTCTAAATCTAGTGCCGCGTTGCGAATGCATCGGAGAACGCACGATAGCGAGTGTAGATTCCAGTGTATGGAGTGCGGGTCTAAGTTCAAGAGGCGCGGGGAGCTGCGGGCCCACGTCACCGTACATACCGGGGAAAAGGCCTTCCGCTGCGGCTGCGGGAAAACTTTTAGACTACGCAGTCAGCTTACCGCTCACTCTAGGGTGCATGATAAACCACTACCGTGA
Protein Sequence
MNNETEQIFLLNPENQSPSVSQKIIEIPTTVPVNLENVEDFSNVCRICATVTEFVIPIFEGEGAQNNLADKIHKHLPIQVTPSDQLPRAVCCQCLHTLLAWHELAACAAQADRALRTRLHVHRAEHEQESKSIRKEECQSLENKEQTELIPFETIVKDILKEYLHSLNMREDQDIEFVCQKCNDHPGSSSMEVLTQHLQFYHLVDINESNTEQFIKNYVTFEEPLTLDLAQDDDSEESVADKVTLPNFSCPFCQNVFTSTKRLLFHLSKHAEFNIDHGVICCENVYSDKMSFVKHLQNDHEGGGNTANTCRSCGFVGESMKELKSHVTTTHVSKKRVKKKHSPNDQKYIPVNCPECNKVFSNKYHMLFHLKSHSETTRFFCDQCEKSYSNQGNLCYHKKLVHQGVLKFTCTTCGEAFPNRLARDSHALLHTGLKPFTCRYCHKSYRSKQTLDRHIEMHLDIRKYGCHICPKRFRKSTHLKYHLNAVSVAESDDEPLSSIANKKTNDLYNNFYSALLNFRNHFVSGHETNNSHRITSESDSEEVENEDDGETNPDNFDDLTQSNMRKDRMDEETRTELSEVRIKMNGKFFYTCKTCGKNLSSPHTYVFHKRIHTGERPCVCHICGKQFRAPSGLQRHLTETHEKLRRHTCRYCPKNFANSQNLKQHMRIHTGERPFVCPQCGKRFTQSGSLHVHLKTHSEQFPYHCAECGAKFRLRSGLARHRLKHTGERPHVCSHCGKGFRQRHELTSHALSHTDSKPFTCVICGAAFRQRRALRHHSKRLHDNDHRGVSTAVTRGSNMMIYTHINTNQYQQFNYIRKERFEFEQQNSERSEIAKPDITLREDGKKYVSCQQCKKSVLISSWRRHTRSHRGEKRYSCHTCGLGFSDSGNLARHARALHSNQRPHTCHICTKTFSRNSHLQDHVKSHSESREFVCDLCGKASKSSAALRMHRRTHDSECRFQCMECGSKFKRRGELRAHVTVHTGEKAFRCGCGKTFRLRSQLTAHSRVHDKPLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00027072;
90% Identity
-
80% Identity
-