Aals016674.1
Basic Information
- Insect
- Agonopterix alstromeriana
- Gene Symbol
- Zfy1
- Assembly
- GCA_963924505.1
- Location
- OZ004679.1:15537755-15543161[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 2.1 1.4e+02 3.7 0.1 2 23 308 330 308 330 0.90 2 16 0.00068 0.044 14.7 2.1 3 23 353 373 351 373 0.95 3 16 0.00027 0.017 16.0 1.0 1 21 379 399 379 400 0.93 4 16 0.021 1.3 10.0 2.4 1 23 551 573 551 573 0.96 5 16 5.9e-05 0.0038 18.1 2.0 2 23 580 602 579 602 0.92 6 16 1.3e-06 8.6e-05 23.2 3.1 1 23 608 630 608 630 0.98 7 16 2.6e-07 1.7e-05 25.5 1.6 1 23 636 658 636 658 0.98 8 16 0.00043 0.028 15.3 1.1 1 23 664 686 664 686 0.98 9 16 4.7e-05 0.003 18.4 5.1 1 23 692 714 692 714 0.96 10 16 0.00018 0.011 16.6 1.4 1 23 720 743 720 743 0.97 11 16 0.78 50 5.1 0.9 2 23 809 829 808 829 0.95 12 16 6.5e-06 0.00042 21.1 0.3 1 23 835 858 835 858 0.96 13 16 3.4e-06 0.00022 22.0 8.1 1 23 864 886 864 886 0.98 14 16 1.4e-05 0.00093 20.0 0.2 1 23 892 914 892 914 0.98 15 16 6.1e-05 0.004 18.0 0.4 1 23 920 942 920 942 0.97 16 16 0.00055 0.036 15.0 1.0 5 23 951 969 949 969 0.96
Sequence Information
- Coding Sequence
- atgaacaACGAAACTGAGCAAATATTTCTCCTGAATCCAGAAAACCAGTCTCCAAGTGTATCACAGAAAATTGTTGAAATTCCCACTACAACTCCAGTTAACCTCGAGAATGTGGAAGActtctcaaatgtatgcaggaTATGTGCCACCGTCACAGAGTTTGTCATCCCCATATTTGAGGGGGAGGGCGCTCAGAACAACCTCGCTGATAAGATACACAAACATTTGCCCATACAGGTAACCCCCGCGGACGCGCTGCCGCGTGCGGTGTGCTGCCAGTGCCTGCACACGCTGCTCGCGTGGCACGAGCTGGCGGCGTGCGCGGCGCAGGCCGACCGAGCGCTGCGCACGCGCCTCCACGTGCTGCGAGCTGAACAGGAATCGAAATCAATTAGGAAAGAAGAATGCCAAAGTCTAGAAAATAAGGAACAGAAAGAGTTGATTCCATTTGAAacaatagtcaaagatatattGAACGAATACTTGCATTCACTGAACATGAGAGAAGACCAAGACATAGAATTTGTATGTCAAAAGTGCACTGATCACCCTGCCTCGTCATCTATGGAGATTCTTATCCAACATCTACAGGTTTACCACCTTGTTGACATCAATGAATCTAACACGGAACAGTTTATCAAAAACTACATCACTTTCGAAGAACCTTTGACACTAGATCTTGTACAAGATGACGATTCTGAAGAAGAATCAGTAGCAGACAAAGTAACTCTGCCAAACTTCTGTTGTCCTTTCTGCCAAAACGTATTTTCGTCGACGAAGCGTCTCTTATTCCATCTCAGTAAACACGCGGAATTGAATATCGACCACGGAGTTATCTGTTGCGAAAACCTTTATAGCGACAAGATGTCCTTCGTAAAACACTTGCAAAATGACCATGAGGGTGGTCATAGCACGGCAAATACGTGTAAAAGTTGTGGCTTCGTCGGTGAGTCCATGGAAGAACTCCAATCCCACGTTACTGCTACCCATAATGTTGGCAAAAAACGTGTCAAGAAGAAACACAGTCCAAATGACCAAAAATATATTCCAGTCAACTGTCCAGAGTGCAACAAAGTATTTTCCAACAAATACCATATGCTTTTCCACTTGAAGAGCCATTCGGAAACTACGAGATTCTTCTGCGATCAATGTGACAAATCCTACAGTAACCAGGGGAACTTGAGTTATCATAAAAAGTGGAATCCCTGCCAGAACTTGGAATCTATATTGAGGAGCGAATCATGCGCACCATTTGATGTGCAGACTATCAACAATAACGAGGATATTAAATATGAACTCTATTACTCCGACATAGGGAGTGTAATTCAATCAGATGTCGTAAGTGTGGCAGAGTCTGACGATGAGCCTCTCTCTTCCATAGCTAATAAAAAAACGAACGATTTGTACAACAACTTCTACTCTGCACTTCTCAATTTTCGAAATCATTTTGTCTCCGGGCACGAAACACATAACAGCCATCGAATTAACTCTGAAAGTGAGTCTGAAGAAGTAGAGAATGAAGATGATGGTGAAACAAACCTGGACAATTTCGACGATTTAACTCAAAGTAACATGAGgaaagacagaatggacgaagaGACTCGAATGGAACTAAGTGAAGTACGAATCAAGATGAACGGCAAATTTTTCTACACCTGCAAAATATGCGGGAAGAATCTAAGTTCACCGCACACATACGTTTTCCACAAACGTATTCACACGGGCGAGCGTCCGTGCGTCTGTCACATCTGCGGCAAACAGTTCCGAGCGCCGAGCGGGCTGCAGCGGCATCTGACGGAAACACACGAGAAACTACGCCGGCACACGTGCCGCTACTGCCCGAAGAACTTCGCGAATTCACAGAATCTGAAACAGCACATGAGGATCCACACCGGAGAGCGACCGTTCGTCTGCCCCCAATGCGGGAAGAGGTTCACCCAGAGCGGATCTCTGCACGTGCATCTAAAGACGCACAGCGAACAGTTCCCGTATCATTGCGCAGAGTGCGGCGCCAAGTTTAGACTAAGATCAGGCCTAGCGAGGCACAGACTGAAACACACCGGAGAAAGACCCCACGTCTGCTCACACTGCGGAAAAGGGTTCCGGCAAAAACATGAGCTGACCAGCCACGCTCTGTCCCACACGGATTCTAAACCTTTCACCTGCGTCATATGTGGGGCCGCGTTCAGACAACGAAGAGCCCTGAGACACCACAGTAAAAGACTACACGATAACGATCATAGGAGCGTCTCTACAGCGGTGACACGCGGATCTAATATGATGATCTACACTCACCTAGGACAATATCAACAATTGAATTATGTACCCCGAAAGGAAACATTCGAATTCGAACAACATTACTCCGAACGATCTGAACTACCAAAACTCGATATAACTCTTCGAGAAGACGGCAAGAAATACGTATCATGTCAACAGTGCAAGAAGAGTGTGTTGATAAGTTCGTGGCGGCGCCACACGAGGTCGCACCGCGGAGAGAAGCGCTACAGCTGCCACACGTGCGGCCTCGGCTTCAGCGACAGCGGCAACCTGGCGCGCCACGCGAGGGCCCTACACTCCAACCAACGCCCACACACCTGCCATATATGCACCAAAACGTTCTCCAGAAACAGCCACCTCCAAGATCACATCAAATCTCATTCCGAAAGCAGAGAATTCGTCTGCGATCTGTGCGGAAAAGCTTCTAAATCTAGTGCCGCGTTGCGAATGCATCGGAGAACGCACGATAGCGAGTGTAGATTCCAGTGCATGGAGTGCGGGTCTAAGTTCAAGAGACGCGGGGAGCTGCGGGCCCACGTCACCGTACATACCGGGGAAAAGGCCTTCCGCTGCGGCTGCGGGAAAACTTTTAGACTACGCAGTCAGCTTACCGCTCACTCTAGGGTGCATGATAGACCACTACCGTGA
- Protein Sequence
- MNNETEQIFLLNPENQSPSVSQKIVEIPTTTPVNLENVEDFSNVCRICATVTEFVIPIFEGEGAQNNLADKIHKHLPIQVTPADALPRAVCCQCLHTLLAWHELAACAAQADRALRTRLHVLRAEQESKSIRKEECQSLENKEQKELIPFETIVKDILNEYLHSLNMREDQDIEFVCQKCTDHPASSSMEILIQHLQVYHLVDINESNTEQFIKNYITFEEPLTLDLVQDDDSEEESVADKVTLPNFCCPFCQNVFSSTKRLLFHLSKHAELNIDHGVICCENLYSDKMSFVKHLQNDHEGGHSTANTCKSCGFVGESMEELQSHVTATHNVGKKRVKKKHSPNDQKYIPVNCPECNKVFSNKYHMLFHLKSHSETTRFFCDQCDKSYSNQGNLSYHKKWNPCQNLESILRSESCAPFDVQTINNNEDIKYELYYSDIGSVIQSDVVSVAESDDEPLSSIANKKTNDLYNNFYSALLNFRNHFVSGHETHNSHRINSESESEEVENEDDGETNLDNFDDLTQSNMRKDRMDEETRMELSEVRIKMNGKFFYTCKICGKNLSSPHTYVFHKRIHTGERPCVCHICGKQFRAPSGLQRHLTETHEKLRRHTCRYCPKNFANSQNLKQHMRIHTGERPFVCPQCGKRFTQSGSLHVHLKTHSEQFPYHCAECGAKFRLRSGLARHRLKHTGERPHVCSHCGKGFRQKHELTSHALSHTDSKPFTCVICGAAFRQRRALRHHSKRLHDNDHRSVSTAVTRGSNMMIYTHLGQYQQLNYVPRKETFEFEQHYSERSELPKLDITLREDGKKYVSCQQCKKSVLISSWRRHTRSHRGEKRYSCHTCGLGFSDSGNLARHARALHSNQRPHTCHICTKTFSRNSHLQDHIKSHSESREFVCDLCGKASKSSAALRMHRRTHDSECRFQCMECGSKFKRRGELRAHVTVHTGEKAFRCGCGKTFRLRSQLTAHSRVHDRPLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00027983;
- 90% Identity
- -
- 80% Identity
- -