Aher025911.2
Basic Information
- Insect
- Agonopterix heracliana
- Gene Symbol
- -
- Assembly
- GCA_963693445.1
- Location
- OY856336.1:2081928-2084300[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0018 2.5 8.9 1.0 18 43 8 30 4 31 0.94 2 19 1.7 2.3e+03 -0.6 0.3 18 43 36 58 32 59 0.62 3 19 0.00019 0.25 12.1 0.0 18 43 67 89 62 90 0.94 4 19 0.00014 0.19 12.4 0.4 17 43 97 120 95 121 0.91 5 19 0.0053 7.1 7.4 0.5 18 44 128 151 124 151 0.91 6 19 1.7e-05 0.023 15.4 2.5 13 43 154 181 151 182 0.90 7 19 0.0034 4.6 8.0 0.2 18 44 188 211 183 211 0.89 8 19 0.018 24 5.7 0.1 17 43 218 241 212 242 0.85 9 19 0.24 3.2e+02 2.1 0.1 15 28 257 270 247 283 0.73 10 19 0.91 1.2e+03 0.3 0.1 15 43 311 336 305 337 0.75 11 19 2 2.7e+03 -0.8 0.0 17 27 372 382 368 395 0.82 12 19 0.018 24 5.7 6.5 12 43 414 442 410 443 0.86 13 19 0.55 7.4e+02 1.0 8.3 11 29 442 460 435 467 0.77 14 19 0.00099 1.3 9.8 3.0 5 43 465 499 461 500 0.84 15 19 0.059 79 4.1 0.8 17 44 505 529 501 529 0.85 16 19 0.38 5.1e+02 1.5 0.7 18 28 536 546 534 559 0.82 17 19 0.51 6.9e+02 1.1 0.2 19 43 567 588 561 589 0.83 18 19 5e-05 0.066 13.9 0.4 18 43 632 654 622 655 0.92 19 19 2.6 3.4e+03 -1.2 0.4 10 27 697 714 688 717 0.77
Sequence Information
- Coding Sequence
- ATGTTCAATTCCCTGGACTTTGTCTGCGACTATTGCAGTCGCACgttcacaagaaaatacaaccTACTAACGCACATAGAAAACTGCCACATAAACTTTTCATGTAACTGCGAGATTTGCGGTCAAAGCTTCGGCAGTCCGGCCGGATTGCAACTACATTTGAGCAGAGGCCACAATAGATACGAACAACCGTTCCCAGAATGTGATATTTGTGGACGTATTTTCACTAGAAAACAGAATATTATGTCGCATATGATTACGGTGCATCTACAAGGTATCGGACCAGAAATTAGGTGTAAATTTTGTGAAAAGGTTTTCACTACCGAAAGGAATTTAAAAAGGCATGTCAATCAATTGCACAATCCAGACGTTCAATATCCGACTTGTGACGTGTGTAAGAAAGTTTTCAAAGGGAAACACTCGCTTATAGCTCACATACAAGCTACACACAACACTTCAGAAAAGGGTGTAATCAGATGTGAACtctgtaataaaatttataccAACAACCGAAATTTGAAACGGCATATTGAGATGTTCCACGGAGAAAAGGAAGAATTCAAATGTGATATTTGCCCAAAAGTTTACACATCGAATCAGAGTTTAAGAAGACATGCTCGCACCGCTCACAATACTGAAGATCAAGAGGAACTTAAGTGTGAATTTTGCTCGAAATTGATCAACGGGAAAGATAATTTAGACAGTCATATTCAAGTACACCACGGAGAGAGTTTAAACTTTAGTGACTGTATTGACACGGATGAAATTAACAATGTGACTTGTGAAAAATGCGGCAGAGATTTCCAAGATGAACCTTTATTGAGGCAACATGTTAAAAATGAGCATTCCTTTAAAACGTTCtacaaatattgtaaaaaatttcTCGTGAACCAATTAGGTAATATCACACCGAAAATTAAAAGTGAAAATTACTTTCAGAACTGTGAATTTTGTAGTCACGCGTTCGATAGCGTATTTCAACTAAAAGATCACATGAGAGTCAATCATGATAGACAATACTCTTTGTCATCGTGTAACGTATGTTTTAATAAGTTTTATAGTAAAGAATCTATGCGAgaacacaaaaaaatatgtgtacCACCAGCCAATGCTAACCCATGCAGTCATTGTGATAAATTGTTCACTGACGTCTCAAGTTTAGAATTTCATACAAGAATATTTCATCCGCAAGCTCAAATAGCCGATTCTAACATTTCTTCAACTAATGTAGACGATTCAATGGATGCTGGTTGTTACAAATGTATGCACTGTAATAGAGTTTACTATAGCGATAGATCGTTAAAACATcatattaaattaaagcatACGACAGACGAAGCTGTTGAATGTGAAATTTGTGGAAAAATTTGCAGTAATAAGTATTATTTGGCGTCACATTTCAAAATTGTTCACAGCGATTCTTGGTCGAAATGTGACTATTGTGATAAACAGTTTAAATCTAAACGTAACATCAGAAGGCATATTGAATACACACATATGGGAATGCAACGATACAAGTGCATAGAATGTGAAACgctttttaaagaaaaacgtAGTCTTCGTAAGCATGTAAGGACTAAGCATCCGAACTCGGTCATCTTCCCACAATGCCAATTTTGTCATAAACGATTTGAGTCCGCGAAATCCTGTAAAATACATTTGAAGTTACTGCATTCGTTCAATATGAATACGTATCCGTGTGATCTTTGTTCCGTTTCCTTTAGCTCAAAGGAAGCTTTAAGCATACATTTACAAACCAAACATTTGGCTGAAGATGAGATTTATAAATGTGAAGATTGCAACTTAGTTTTTAAAGGGCAGGAAAAATTCGAGCAGCACAATGAAGTATATCATGTCAATGTAGTAACGAATGTTAAACAAAAAGTGTTGCCACGTTGCATTATCTGTATGAAAGATTTCAGTACGAGGAAAACTTTAAAAAGACACATTAAGAAATTCCATGACGGTTTCGATGCCGAAGAACTAGCAAATTTCGGTTCCAAGAAACGAATTTTCAGCATTGAATGCGATGACTGCATTAAAAATTTCAACGACGActtctattttaatatttatcaaAAGTTAAAGCATATTAGAGactcgattatttttaaatgtgaaaCGTGTAAGTCGTCATATAATATATTGGAGTATTCGATACAGAGGTATAAGTTGACGAATTCAGATTTGTGTAAAAGTAAAATGATTTTGAGTGAGTTGTGTACGACTGAGATGAGCGAAGAGGATGAATATTCAGGGTTTGGTTCGTTTCATGAGATGATGGAACCAGAGAGTACAACGCAAGACATCATTATTAAACAGGAAATAGACACTTTTGAATATGATATAAAGTCTGAACCTATGTCCCCTTGA
- Protein Sequence
- MFNSLDFVCDYCSRTFTRKYNLLTHIENCHINFSCNCEICGQSFGSPAGLQLHLSRGHNRYEQPFPECDICGRIFTRKQNIMSHMITVHLQGIGPEIRCKFCEKVFTTERNLKRHVNQLHNPDVQYPTCDVCKKVFKGKHSLIAHIQATHNTSEKGVIRCELCNKIYTNNRNLKRHIEMFHGEKEEFKCDICPKVYTSNQSLRRHARTAHNTEDQEELKCEFCSKLINGKDNLDSHIQVHHGESLNFSDCIDTDEINNVTCEKCGRDFQDEPLLRQHVKNEHSFKTFYKYCKKFLVNQLGNITPKIKSENYFQNCEFCSHAFDSVFQLKDHMRVNHDRQYSLSSCNVCFNKFYSKESMREHKKICVPPANANPCSHCDKLFTDVSSLEFHTRIFHPQAQIADSNISSTNVDDSMDAGCYKCMHCNRVYYSDRSLKHHIKLKHTTDEAVECEICGKICSNKYYLASHFKIVHSDSWSKCDYCDKQFKSKRNIRRHIEYTHMGMQRYKCIECETLFKEKRSLRKHVRTKHPNSVIFPQCQFCHKRFESAKSCKIHLKLLHSFNMNTYPCDLCSVSFSSKEALSIHLQTKHLAEDEIYKCEDCNLVFKGQEKFEQHNEVYHVNVVTNVKQKVLPRCIICMKDFSTRKTLKRHIKKFHDGFDAEELANFGSKKRIFSIECDDCIKNFNDDFYFNIYQKLKHIRDSIIFKCETCKSSYNILEYSIQRYKLTNSDLCKSKMILSELCTTEMSEEDEYSGFGSFHEMMEPESTTQDIIIKQEIDTFEYDIKSEPMSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00027984;
- 90% Identity
- iTF_00027984;
- 80% Identity
- iTF_00027984;