Aher013137.1
Basic Information
- Insect
- Agonopterix heracliana
- Gene Symbol
- -
- Assembly
- GCA_963693445.1
- Location
- OY856319.1:4453872-4459652[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.4e-10 4e-07 30.3 0.0 4 39 180 216 177 220 0.90 2 4 1.3e-12 2.1e-09 37.6 0.2 1 39 231 269 231 272 0.94 3 4 5.2e-14 8.5e-11 42.1 0.0 2 45 287 331 286 331 0.96 4 4 1.2e-18 2e-15 56.9 0.0 1 43 338 381 338 382 0.96
Sequence Information
- Coding Sequence
- ATGCCCGGCAACGGACTGTTTCAAGTAAAATGCGAGCCGACATCAGAAGACGAAAACAGTAATTCGCAATTTACGcacatttattttagtaatcagcTTTCGTCTGAACTCCGTCCTGTGAAATTAGAGGCGGATTGTCAAAGCAACGAAAATGTACCCTCCGATATATTGCATCATCTACAGGGTGGGCTGGAGGTACTCGCGCCGGCGGGGCCGGCCGCGACACCGGTGCGCGTGAAGCCGGAGCGCGAGCCCGCCGCCACGCCGCCCGCCATGCTCGAGGTGCTCCAGTCCGCGCCCAACGCCAACTCCACCAAGGGTTCCACGTTGCTCGACCGTCACATGGCGATGCTGAGCGCAACCGAAGTGCCTGACTCCACCGACTTCATGCCGCTGATGGCTGTCAAAGACGAACCTGTCTCTGAAGGGGAACAACAGACGCAGAGCGGGGATGACACGAGCGACTCGTCGACGCCGGCTGACGCACCGCGTGCCCCCAGCGCTGGGCTCATGGGGCCCAAGAGCTGGACCCAGCGCGACATGGACAACGCGCTCGACGCGCTACGGAAACACAACATGAGCCTCACTAAGGCATCGGCGATGTTCGGCATCCCGTCCACGACGCTGTGGCAGCGCGCGCACCGGCTCGGCATCGACACGCCGAAGAAGGAGGGCGCCGCCAAGTCGTGGAGCGAGGAGGACCTGCGGCAGGCCCTGCACGCCCTGCGGGCCGGGGCCATCTCCGCTAACAAGGCTAGTAAGGCTTACGGCATCCCGAGCAGCACGCTGTACAAGATAGCGCGGCGCGAGGGCATCCGCCTGGCGGCGCCGTTCAACGCGGCGCCCACCGCCTGGCGCCGCGCCGACCTCACGCGCGCGCTCGGTGCCATCCGCGCCGGCGACGCCACCGTGCAGCGCGCCGCCTCGCTGTTCGGCATACCCACCGGCACATTGTACGGGCGGTGCAAACGAGAAGGTATTGAACTATCTCGCTCGAACCCCACGCCATGGTCCGAGGATGCCATGGGAGAAGCGTTAGAAGCTGTGAGAGTGGGCCAGATGTCCATCAACCAGGCAGCAATCCACTACAACCTGCCCTACTCCTCGCTGTATGGACGATTCAAGAGATGCAAGTACCCTACTCAGGGACACCAACCTCAGCAAGACATGCAGAAGCCCATCGAAATGGAAACCCATCACATACAAGACTTAAACTACTACCCTCCGATGCCGTCCCACACAATACACCACCACCCCGAGGCAGAACCCCTTATACAATCATACATGCCCATGAATGAGCAAGAGACTATGCACGGTAACTATATGCAGGAACATTACAGTGGACAGATGTATTATGCTCAGAGCTGTAATATGGCAAGTTGA
- Protein Sequence
- MPGNGLFQVKCEPTSEDENSNSQFTHIYFSNQLSSELRPVKLEADCQSNENVPSDILHHLQGGLEVLAPAGPAATPVRVKPEREPAATPPAMLEVLQSAPNANSTKGSTLLDRHMAMLSATEVPDSTDFMPLMAVKDEPVSEGEQQTQSGDDTSDSSTPADAPRAPSAGLMGPKSWTQRDMDNALDALRKHNMSLTKASAMFGIPSTTLWQRAHRLGIDTPKKEGAAKSWSEEDLRQALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLTRALGAIRAGDATVQRAASLFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYPTQGHQPQQDMQKPIEMETHHIQDLNYYPPMPSHTIHHHPEAEPLIQSYMPMNEQETMHGNYMQEHYSGQMYYAQSCNMAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00026768;
- 90% Identity
- iTF_00026768;
- 80% Identity
- -