Aals022562.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agonopterix alstromeriana
Gene Symbol
egg
Assembly
GCA_963924505.1
Location
OZ004690.1:5397840-5427535[+]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8 6.5e+03 -2.7 0.1 29 38 448 457 416 458 0.70
2 2 9.8e-15 3.5e-11 43.0 0.0 4 74 489 552 486 555 0.88

Sequence Information

Coding Sequence
ATGTTGAATGAAACGTGGATCAAATACAATATGGACGCGCGATTGAAGGAGACAGAAGATGAACTTAATTCTGAGATCAAACGGTTAGAAGATGAAAGTAAAGAAATAAATGACATGCTGAACGAATGTCAGCTATCGACGGACAAGTTACGCAATGACCTGTACGCGACCTTCCAGCAAGAGCAGCAGGAGTTATCATCCATTGTCATATTCGACACGCCCGATAACGTGAGTCGAATATTGAAGCGTCGGCTGTCATCTGTGACAGAGACGGCACCCAAGAGGCCGGCTATCCCTCTCGGCTACACTCCGCTGGATTCTGACTCTATGCAAGTACAGACACCAACGCAGAAGGACATATCAGTAGTGACGCTATCGGCGGAGGCGGCACCCCCCGGCCTGCCGCCCCCCGGGGAGGTGCGGCGCCCCCCGCTGCAGACCGGCGTCATAGTGTACGCGGCTCGCAACGCGTCCAGCTCGTGGCTGCGCGCCAAGCTGGTCGAGTACACGCATAAGGATAGCGTGCCTAATACACCATTCTCAATGTGCCGTGTGAGATTCGAAATGAAGAATCAGAAGAGTACGACCAAGGTTATCCCGGCCCGCTACGTCGCTTACTTCGACCCTTGCGACGTAAGACTTACTATTGGTACAAGAGTAATAGCGCTGTTCAAAGACACAGATACGAACTCGCTAAAGAAACGCACCTCATATTATTCTGGTGTTGTAGCCGAGATACCCAACCCTGTTAACAGTTACAgATACCTAGTGTTCTTCGACGACGGGTACGCTCAGTACGTGCGTCACGCGGACGTGCGCCTCGTGTGCGAGTGCTCGTCGCTCGTGTGGGAGGAGGTGCAGCCCTTCTCCAGGGAGTTCGTGCGCCAGTACCTGCTCGCCTACCCGGAGCGACCCATGGTCCGTCTGCACACCGGACAGAGCCTCAAGACCGAGTGGAACGGAAAATGGTGGATCTCGAAAGTCATCCAAGTGGACGCTTCCCTCGTCCACGTGCACTTCGAGGAGGACAACCGCACGGAGTGGATTTACCGCGGCTCCACCCGCCTCGCTCCGCTCTACCTGGAGCTGCAGGCCGCGGAGAGACATAGAGCCAGGCCACTGCCCAGGAACAGGGCTCAGGCGAGGACGAACATGCCGTACGTGGAATACACGCGGTCCGAGGGGGAGGCCCAGAAGTCTCCGGCCGAACCAGTGGGCACACCCGCCCAGCAAGAGGAGATCCGTCGTCAGCGCGCAGTTGCTAAGAAGTCGACAGTGAGTGCGCCCGCGCCCGCTCCCgcccccgccgccgccgcccccccGCCCGCCAGCGTCGAGCCCGTCACCAGCAGGGTCGTGTACTACACTCCGAAGAACGCGGTGAAGCCATACAAGATGGCGGCCCACACTTGCAGCCCCAAGTGTAAGAGGAGCGATGTCCTGGCTCTGGCAGACTTGAGGACTTACAACCCTCTGGCTAAGCCACTCCTCAGCGGCTGGGAGAGACAAATAGTCCGCTACAAAGGCCACAAGGACGTAATGTACCGCGCACCATGCGGCCGGCGTATCCGCAACATGAGAGAACTACACCGATACCTTCGAGCGACTCGAGCAGACATGGGAGTTGATCTGTTCGACTTCGGCGCCAACACTCACTGCTTGGCAGAGTTCGTGCTCAACAAGTGTCTCGTCGGCAAGAAGGACCTATCAAACGGCAAGGAGAATGTGCCAGTGCCATGCGTGAACTACTACGACGACACCCTCCCGGAGTTCTGTTCGTACAACACTGAGAGGACCCCCACCGCGGGGGTCCCTCTCAACCTCGACCCGGACTTCCTGTGCGGCTGCGACTGTACCGACGATTGCGAGGACAAATCGAAATGCGCTTGCTGGAAGCTGACGCTAGAGGGCGCGCGCACGATAGGACTGAAGGGGAACAACGTTGGCTACTCATACAAGAGGCTGCCCGAGCCTCTACCCTCCGGCATATACGAGTGCAACTCGAGGTGTAAATGCAAGCACACGTGTTTAAATCGGGTGGCACAGCATCCTTTACAACTGAAACTCCAGGTATTTAAGACACCGAACCGCGGCTGGGGCATCCGGGCACTGAACGACGTGCCCAAAGGATCGTTCCTATGCGTGTACGCGGGGAATCTACTCACGGACGCCACCGCTAACCTGGACGGTCTGAACGAAGGGGACGAATATCTTGCCGAGTTGGACTACATAGAGGTCGTAGAGCAGATGAAGGAGGGATACGAGGACGACATACCCCAGGCCGATAAGAAACTTGATAAGAAAGACGGTGCCAAAGAAGAATCAGACGATGAAGAAGAGGAAGAATCCTCCGCGGACGAGGAGGGACCTTCCAAGAACGAGAAGGAAGACGGCGACTTTGAGCCCGGCTTCCTGGGCGGCGGGTTCATTGCGTTCAGAAAACAACTGCGCAAGCGTGATAGAGCTAAGAACGAAAAGGAGGAAGTAGTTAAGAAGGAAGTTACTAAAGAGGGTGGCGATGATGACTGCATCACCATCAGTGACGACGAAGAGGTGAGAGAACCGTCAAGGTTCATGGCGCAGGCTGGCATGGGCGCCAACCATTTCGTATCTAAATATAGttCGGTTCGAACGCTCTACGGTAAAGATGAGGCGTGCTATATCATGGACGCCAAGGTTCAAGGCAACATCGGCAGATATCTCAATCACTCCTGCTGTCCCAACGTGTTCGTACAGAACGTGTTCGTAGACACCCACGACCCACggttcccgtgggtgtcgttcTTCGCCGCAAGCCACATCCGGGCGGGCACCGAGCTCACCTGGAACTACAATTATGACATAGGCTCAGTACCCGGCAAGGTGCTGTACTGCTACTGTGGCGCCACCAATTGTAGGGGACGGTTACTTTAA
Protein Sequence
MLNETWIKYNMDARLKETEDELNSEIKRLEDESKEINDMLNECQLSTDKLRNDLYATFQQEQQELSSIVIFDTPDNVSRILKRRLSSVTETAPKRPAIPLGYTPLDSDSMQVQTPTQKDISVVTLSAEAAPPGLPPPGEVRRPPLQTGVIVYAARNASSSWLRAKLVEYTHKDSVPNTPFSMCRVRFEMKNQKSTTKVIPARYVAYFDPCDVRLTIGTRVIALFKDTDTNSLKKRTSYYSGVVAEIPNPVNSYRYLVFFDDGYAQYVRHADVRLVCECSSLVWEEVQPFSREFVRQYLLAYPERPMVRLHTGQSLKTEWNGKWWISKVIQVDASLVHVHFEEDNRTEWIYRGSTRLAPLYLELQAAERHRARPLPRNRAQARTNMPYVEYTRSEGEAQKSPAEPVGTPAQQEEIRRQRAVAKKSTVSAPAPAPAPAAAAPPPASVEPVTSRVVYYTPKNAVKPYKMAAHTCSPKCKRSDVLALADLRTYNPLAKPLLSGWERQIVRYKGHKDVMYRAPCGRRIRNMRELHRYLRATRADMGVDLFDFGANTHCLAEFVLNKCLVGKKDLSNGKENVPVPCVNYYDDTLPEFCSYNTERTPTAGVPLNLDPDFLCGCDCTDDCEDKSKCACWKLTLEGARTIGLKGNNVGYSYKRLPEPLPSGIYECNSRCKCKHTCLNRVAQHPLQLKLQVFKTPNRGWGIRALNDVPKGSFLCVYAGNLLTDATANLDGLNEGDEYLAELDYIEVVEQMKEGYEDDIPQADKKLDKKDGAKEESDDEEEEESSADEEGPSKNEKEDGDFEPGFLGGGFIAFRKQLRKRDRAKNEKEEVVKKEVTKEGGDDDCITISDDEEVREPSRFMAQAGMGANHFVSKYSSVRTLYGKDEACYIMDAKVQGNIGRYLNHSCCPNVFVQNVFVDTHDPRFPWVSFFAASHIRAGTELTWNYNYDIGSVPGKVLYCYCGATNCRGRLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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