Aals007041.1
Basic Information
- Insect
- Agonopterix alstromeriana
- Gene Symbol
- clz9_2
- Assembly
- GCA_963924505.1
- Location
- OZ004667.1:9827425-9830034[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.4e-10 5.6e-07 29.6 0.0 2 40 15 54 14 56 0.92 2 3 1 9.1e+02 0.2 0.0 21 34 658 671 657 676 0.86 3 3 0.072 63 3.9 0.1 26 40 712 726 710 729 0.90
Sequence Information
- Coding Sequence
- ATGCCTCGGACTTATATAAAAAAGAAAGTACCAAAATATTCTAAAGAAGATCTCGATAAAGCGATAAATGAAGTACAAAATAACCAATCTTCAATGTACGCCGCTGCGCATAAACACGGTATACCCACAACTACACTTTATGACAAGTTAAAAGAGAACCACACGTTAAATGTGGGTAGACCGCAAGCTATACCTTTCGAACAAGAACAGCGATTAGCGGATGGCCTTAGGACAATGGAAAAATGGGGTTTCGGATTGTCTAGGAACGAAACTTTAGAAATAGTTGCCGACTATGTCGAgaagaacaatctagaaactccaTTTGCCAATAATAAACCAGGGCCGGATTGGTTTATTAATTTTAGAAAAAGACACCGTCTATCGGTGAAAAAACCTCAACCAGTAGAGTATGTTCGAAAGAAGATGACGGACCCTTTCATTATTCATGAGTACTTTGAGATGCTAGAAAATACCCTGACTGAACTAAATTTACTTGAAAGGCCAGATTTGATTTGGAATCTGGATGAAACTTCACTATGCCTAGACCCTACTAGAACCAAAGTGGTAGGTGCGGTAAATAAAGCATGCTCGAGGACGACCTTTGGCAGTGCCAAAGAGAACATTACCGTATTGGCAGCTGCAAGTGGCTCtggcaaaaaaatatcaccctTGATTATTTTTAAAGGTAAAAACGTGTGGAATCAGTGGATGGCCACCACAGATAATTATGATTTCGAGTTGGCTTACGCAGCTAGCACCAAGGGCTGGATGGAAGGACCGatatttctcaattatttggAAAGAGTATTATTTCCAGCTCTTGGTGAAGAACGCCCTGTATTGATTGTTTATGATGGCCATTCAACACACGTGACTCTAGATGTTGTACAGCTGGCTATCCGATATGGGATTACGATCTTAAAACTGCCTCCTCATACATCCCACTTATTGCAGCCCTTAGATGTGGCAGTTTTCAAGTCTTTTAAATGCAAGTGGGACGCGAAATTGGTGGCATGGCAGCGGCGCAATGTTGGAACCAAAAtgccaaaaaacatttttgctcaGACATTTGCAGAAACTTGGCAGGAAACAAGTCCCGAAGTAATAAAAAATGGCTTCAAAAAAACTGGGATTCACCCATTTAATCCCAACGTTATCTCAGAAGACAAATTTGAACCGGCTGCTTTTAAACGATTCAAAGAAAAGCAAAGCACACAAGCGCTCAAGAACCCAAAACCTTTACAAGAGTTATGTATTGATGTTGTAAACGAAACTTTACAGCTTTCGAACAATGTCTTTGAATCTGAAAAATGTACACAAAGCCTTGCAGAATCTAATTTCAACACTACTAATGCCATCTTGGCTACAACACGAAACCTTGAAGAAGCTGATTTCAACACTAATAATGCCACCTTGGCTACATCACAAAACCTTGAAGAAGCTGATTTTGGTACTAAGAATGTCACTTTGATTGCAAAACTTTCCCGAAAAGATGACCAGACGCAACCATTTGTGGCAAATGACACATCGAGTTTACCAAAATGCTTGACATTTGGACAAAGTAGAAAGCCTGAACCTAAAGTAAAAATCATCTCCAACATAAAGATCAATTTTGAAGAACTATTGCTCGAGAAAATAAAACAGGATAAAAAGGATAATAACTGTTCTACAAAGAAAAAGCGGGTGGCTAAAGGAGCCGAAGTAATAACTGCAGCTAAGCTTgttgaagaaaaagaaaagctAGTAAAAGAAAGTGCTTCAAAAAAGTCAGAAAAGAAAAgtgataataaaaataagaaatcaacggcagATTCAAATGACTCTGCGACTGATATTTCTGACATAATAAGTCTCTACAGTGACATAGATGTTGAGCAATATTATGACTATGATACACTTGGGGTAGAATACTGTGCggaaaattatgaaattgaacaacCTGATTCTCTAAAAAATGACGATAATGATGAAGAAGCTGCGACTGGTCatgaaataagtaaaaataCGATCAACACAACTGTGTCGGTAGATAAAAATGCTCtcacaaaaactaaaaataaagAACATAATGAATCTGAAAATGAATATCCAACTCATCAACCCAAGGATATAGATCTACAACGagttgaaaattacaatataaacgATTCAGTTCTTGTGAGATATTACAACAGAAAGAAGTGGACCTATTACATCGGTTTCATAACAAATATTATACAAAAGGATGAGGACACTCAGTACTGTGTGGATTACTTGAAAACCGTGAAGAAACCCCAACTCATATTtataaaacctaaaaaaatagaTCATGACGTAGTGACAGATTTATCGATTGTAAAGAagataaaattacaaaagaaaGGTCAAGAATATAGCTTACTTGATGACTGTGACAGcgcatttttttaa
- Protein Sequence
- MPRTYIKKKVPKYSKEDLDKAINEVQNNQSSMYAAAHKHGIPTTTLYDKLKENHTLNVGRPQAIPFEQEQRLADGLRTMEKWGFGLSRNETLEIVADYVEKNNLETPFANNKPGPDWFINFRKRHRLSVKKPQPVEYVRKKMTDPFIIHEYFEMLENTLTELNLLERPDLIWNLDETSLCLDPTRTKVVGAVNKACSRTTFGSAKENITVLAAASGSGKKISPLIIFKGKNVWNQWMATTDNYDFELAYAASTKGWMEGPIFLNYLERVLFPALGEERPVLIVYDGHSTHVTLDVVQLAIRYGITILKLPPHTSHLLQPLDVAVFKSFKCKWDAKLVAWQRRNVGTKMPKNIFAQTFAETWQETSPEVIKNGFKKTGIHPFNPNVISEDKFEPAAFKRFKEKQSTQALKNPKPLQELCIDVVNETLQLSNNVFESEKCTQSLAESNFNTTNAILATTRNLEEADFNTNNATLATSQNLEEADFGTKNVTLIAKLSRKDDQTQPFVANDTSSLPKCLTFGQSRKPEPKVKIISNIKINFEELLLEKIKQDKKDNNCSTKKKRVAKGAEVITAAKLVEEKEKLVKESASKKSEKKSDNKNKKSTADSNDSATDISDIISLYSDIDVEQYYDYDTLGVEYCAENYEIEQPDSLKNDDNDEEAATGHEISKNTINTTVSVDKNALTKTKNKEHNESENEYPTHQPKDIDLQRVENYNINDSVLVRYYNRKKWTYYIGFITNIIQKDEDTQYCVDYLKTVKKPQLIFIKPKKIDHDVVTDLSIVKKIKLQKKGQEYSLLDDCDSAFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00026779;
- 90% Identity
- iTF_00026779;
- 80% Identity
- -