Aals000471.2
Basic Information
- Insect
- Agonopterix alstromeriana
- Gene Symbol
- clz9
- Assembly
- GCA_963924505.1
- Location
- OZ004661.1:2375243-2377852[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.1e-10 6.1e-07 29.5 0.0 2 40 15 54 14 56 0.92 2 3 1.1 9.9e+02 0.0 0.0 21 34 690 703 689 708 0.86 3 3 0.079 68 3.8 0.1 26 40 779 793 777 796 0.90
Sequence Information
- Coding Sequence
- ATGCCTCGGACTTATATAAAAAAGAAAGTACCAAAATATTCTAAAGAAGATCTCGATAAAGCGATAAATGAAGTACAAAATAACCAATCTTCAATGTACGCCGCTGCGCATAAACACGGTATACCCACAACTACACTTTATGACAAGTTAAAAGAGAACCACACGTTAAATGTGGGTAGACCGCAAGCTATACCTTTCGAACAAGAACAGCGATTAGCGGATGGCCTTAGGACAATGGAAAAATGGGGTTTCGGATTGTCTAGGAACGAAACTTTAGAAATAGTTGCCGACTATGTTGAgaagaacaatctagaaactccaTTTGCCAATAATAAACCAGGGCCGGATTGGTTTATTAATTTTAGAAAAAGACACCGTCTATCGGTGAAAAAACCTCAACCAGTAGAGTATGTTCGAAAGAAGATGACGGACCCTTTCATTATTCATGAGTACTTTGAGATGCTAGAAAATACCCTGACTGAACTAAATTTACTTGAAAGGCCAGATTTGATTTGGAATCTGGATGAAACTTCACTATGCCTAGACCCTACTAGAACCAAAGTGGTAGGTGCGGTAAATAAAGCATGCTCGAGGACGACCTTTGGCAGTGCCAAAGAGAACATTACCGTATTGGCAGCTGCAAGTGGCTCtggcaaaaaaatatcaccctTGATTATTTTTAAAGGTAAAAACGTGTGGAATCAGTGGATGGCCACCACAGATAATTATGATTTCGAGTTGGCTTACGCAGCTAGCACCAAGGGCTGGATGGAAGGACCGatatttctcaattatttggAAAGAGTATTATTTCCAGCTCTTGGTGAAGAACGCCCTGTATTGATTGTTTATGATGGCCATTCAACACACGTGACTCTAGATGTTGTACAGCTGGCTATCCGATATGGGATTACGATCTTAAAACTGCCTCCTCATACATCCCACTTATTGCAGCCCTTAGATGTGGCAGTTTTCAAGTCTTTTAAATGCAAGTGGGACGCGAAATTGGTGGCATGGCAGCGGCGCAATGTTGGAACCAAAAtgccaaaaaacatttttgctcaGACATTTGCAGAAACTTGGCAGGAAACAAGTCCCGAAGTAATAAAAAATGGCTTCAAAAAAACTGGGATTCACCCATTTAATCCCAACGTTATCTCAGAAGACAAATTTGAACCGGCTGCTTTTAAACGATTCAAAGAAAAGCAAAGCACACAAGCGCTCAAGAACCCAAAACCTTTACAAGAGTTATGTATTGATGTTGTAAACGAAACTTTACAGCTTTCGAACAATGTCTTTGAATCTGAAAAATGTACACAAAGCCTTGCAGAATCTAATTTCAACACTACTAATGCCATCTTGGCTACAACACGAAACCTTGAAGAAGCTGATTTCAACACTAATAATGCCACCTTGGCTACATCACAAAACCTTGAAGAAGCTGATTTTGGTACTAAGAATGTCACTTTGATTTCAAAACTTTCCCGAAAAGATGACCAGACGCAACCATTTGTGGCAAATGACACATCGAGTTTACCAAAATGCTTGACATTTGGACAAAGTAGAAAGCCTGAACCTAAAGTAAAAATCATCTCCAACATAAAGATCAATTTTGAAGAACTATTGCTCGAGAAAATAAAACAGGATAAAAAGGATAATAACTGTTCTACAAAGAAAAAGCGGCTGGCTAAAGGAGCCGAAGTAATAACTGCAGCTAAGCTTgttgaagaaaaagaaaagctAGTAAAAGAAAGTGCTTCAAAAAAGTCAGAAAAGAAAAgtgataataaaaataagaaatcaacggcaggtaaaaaaaagtcagAATATAATGCTCCGGGCCCGTcaaggacaaaaaaaattactaaaaaacaaaacaaaaagaaaagaaaaaataatgacACAGATTCAAATGACTCTGCGACTGATATTTCTGACATAATAAGTCTCTACAGTGACATAGATGTTGAGCAATATTATGACTATGATACACTTGGGGTAGAATACTGTGCggaaaattatgaaattgaacaacCTGATTCTCTAAAAAATGACGATAATGATGAAGAAGCTGCGACTGGTCatgaaataagtaaaaataCGATCAACACAACTGTGTCGGTAGATAAAAATGCTCtcacaaaaactaaaaataaaggtAAGGGTAAAAGGAGCAAaggaaaagaaaataatgaagACATAAAGATCAAAAAATGTAATAAGACTGATGATGACCAAATTTCACGTAAAAGTGTCCTTTCAGAACATAATGAATCTGAAAATGAATATCCAACTCATCAACCCAAGGATACAGATCTACAACGagttgaaaattacaatataaacgATTCAGTTCTTGTGAGATATTACAACAGAAAGAAGTGGACCTATTACATCGGTTTCATAACAAATATTATACAAAAGGATGAGGACACTCAGTACTGTGTGGATTACTTGAAAACCGTGAAGAAACCCCAACTCATATTtataaaacctaaaaaaatagaTCATGACGTAGTGACAGATTTATCGATTGTAAAGAagataaaattacaaaagaaaGGTCAAGAATATAGCTTACTTGATGACTGTGACAAcgcatttttttaa
- Protein Sequence
- MPRTYIKKKVPKYSKEDLDKAINEVQNNQSSMYAAAHKHGIPTTTLYDKLKENHTLNVGRPQAIPFEQEQRLADGLRTMEKWGFGLSRNETLEIVADYVEKNNLETPFANNKPGPDWFINFRKRHRLSVKKPQPVEYVRKKMTDPFIIHEYFEMLENTLTELNLLERPDLIWNLDETSLCLDPTRTKVVGAVNKACSRTTFGSAKENITVLAAASGSGKKISPLIIFKGKNVWNQWMATTDNYDFELAYAASTKGWMEGPIFLNYLERVLFPALGEERPVLIVYDGHSTHVTLDVVQLAIRYGITILKLPPHTSHLLQPLDVAVFKSFKCKWDAKLVAWQRRNVGTKMPKNIFAQTFAETWQETSPEVIKNGFKKTGIHPFNPNVISEDKFEPAAFKRFKEKQSTQALKNPKPLQELCIDVVNETLQLSNNVFESEKCTQSLAESNFNTTNAILATTRNLEEADFNTNNATLATSQNLEEADFGTKNVTLISKLSRKDDQTQPFVANDTSSLPKCLTFGQSRKPEPKVKIISNIKINFEELLLEKIKQDKKDNNCSTKKKRLAKGAEVITAAKLVEEKEKLVKESASKKSEKKSDNKNKKSTAGKKKSEYNAPGPSRTKKITKKQNKKKRKNNDTDSNDSATDISDIISLYSDIDVEQYYDYDTLGVEYCAENYEIEQPDSLKNDDNDEEAATGHEISKNTINTTVSVDKNALTKTKNKGKGKRSKGKENNEDIKIKKCNKTDDDQISRKSVLSEHNESENEYPTHQPKDTDLQRVENYNINDSVLVRYYNRKKWTYYIGFITNIIQKDEDTQYCVDYLKTVKKPQLIFIKPKKIDHDVVTDLSIVKKIKLQKKGQEYSLLDDCDNAFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00026780;
- 90% Identity
- iTF_00026780;
- 80% Identity
- -