Basic Information

Insect: Agelastica alni
Gene Symbol: -
Assembly: GCA_950111635.2
Location: OX467709.1:49073869-49079501[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.047 12 8.3 3.2 2 23 148 169 147 169 0.96

2 16 0.013 3.3 10.0 3.0 3 23 177 197 176 197 0.96

3 16 0.0006 0.15 14.2 0.7 1 23 204 226 204 226 0.93

4 16 0.00015 0.037 16.1 0.8 1 23 328 350 328 350 0.99

5 16 8.7e-07 0.00021 23.2 4.4 2 23 357 378 356 378 0.97

6 16 0.0017 0.43 12.8 5.5 2 23 402 424 401 424 0.94

7 16 2.3e-05 0.0056 18.7 2.5 3 23 501 521 499 521 0.96

8 16 0.00017 0.043 15.9 0.9 1 23 527 550 527 550 0.92

9 16 1.2e-06 0.0003 22.7 0.8 1 23 555 577 555 577 0.98

10 16 8.3e-07 0.0002 23.2 2.4 2 23 587 608 586 608 0.97

11 16 9.7e-08 2.4e-05 26.2 0.9 1 23 615 637 615 637 0.97

12 16 2.2e-05 0.0053 18.8 1.6 3 23 649 669 647 669 0.92

13 16 7.1e-05 0.017 17.1 4.4 1 23 675 697 675 697 0.99

14 16 3e-05 0.0074 18.3 1.7 1 23 703 725 703 725 0.96

15 16 4.6e-07 0.00011 24.0 0.4 1 23 731 753 731 753 0.99

16 16 0.0001 0.025 16.6 0.1 1 23 759 783 759 783 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.047	12	8.3	3.2	2	23	148	169	147	169	0.96
2	16	0.013	3.3	10.0	3.0	3	23	177	197	176	197	0.96
3	16	0.0006	0.15	14.2	0.7	1	23	204	226	204	226	0.93
4	16	0.00015	0.037	16.1	0.8	1	23	328	350	328	350	0.99
5	16	8.7e-07	0.00021	23.2	4.4	2	23	357	378	356	378	0.97
6	16	0.0017	0.43	12.8	5.5	2	23	402	424	401	424	0.94
7	16	2.3e-05	0.0056	18.7	2.5	3	23	501	521	499	521	0.96
8	16	0.00017	0.043	15.9	0.9	1	23	527	550	527	550	0.92
9	16	1.2e-06	0.0003	22.7	0.8	1	23	555	577	555	577	0.98
10	16	8.3e-07	0.0002	23.2	2.4	2	23	587	608	586	608	0.97
11	16	9.7e-08	2.4e-05	26.2	0.9	1	23	615	637	615	637	0.97
12	16	2.2e-05	0.0053	18.8	1.6	3	23	649	669	647	669	0.92
13	16	7.1e-05	0.017	17.1	4.4	1	23	675	697	675	697	0.99
14	16	3e-05	0.0074	18.3	1.7	1	23	703	725	703	725	0.96
15	16	4.6e-07	0.00011	24.0	0.4	1	23	731	753	731	753	0.99
16	16	0.0001	0.025	16.6	0.1	1	23	759	783	759	783	0.93

Sequence Information

Coding Sequence: atgATTAATAAAGAATCTGAATTTATTATCGATAAAATATGCCGATGCTGCATGTGTGAAAATGAAAACATGCAAAATGTGTTTGAAACGAAAAATGAAGAGACGGAAGATTCAACAACACAATTGTCCGATATGCTGGTGGCTTGTGCTTCAATAGAGGTTGTTTCTGGGGATGGTTTACCAAACAAATTGTGTAAAGGTTGCGAAGGAAAACTAAAAAGTGCCTATGAGTTTAGAAAGTTATGCCAAAAATCTGATACAACTTTAAGAGATCTTACTCAGGATACGAAGAAAGGTATTCGGCATGAAGAAGATATTATCGTACAACCTGACGTACCTGACGATGTttttgaagaagaagatgaagatAATGTTTCACTTTTACAAAggggtttaaaaagaaaaaggggtagacctaaaaaaaaagatgtggacAATTTGTCCTGCCAATTTTGTCACAAACTGTTACAAACTAAAAAAGGCCTTAGAGTGCACCTTCGATCACATACAGGTGAAAATCTAAGATACTGTTTGTTTTGTGATGCTAAATATACTAGAACTAACCATTTAATTAGGCATTTTATGACTCATGATAAGCCAGGTTTGATCCATCCATGTGAAAGTTGTGATAAGACTTTCACAGAGGCAGCTGAATTGTATCGCCATTCTCAAGATCATAAGGATgcagaagaaaaaattaaagaaaaaataaaaacagaagcTGAAATTAAAACTGAAGTAATGCCTGAACTTTTTGGAATAAGTCAAGAacaagaaagaaaagaaaaatctcAAGAAACAGAAGATCTAGGTAATTTTAGTGATGATAATGGTTTTAATGATTTTCCTGTTAGTGATAGAGATGATACTAATGGAAGTGATGAAGATTTTGCTGTTACTCTTGATGGAAAAGAAAAACGAACTAAatctaaaaagaaaaagaagattaaaactgaaaataaagaaaaagataaagCCTTGTATGAATGTAAAGAATGTACAAAAGTTATGACTACATACATTGGACTCAAGATTCATATGAGGAAACACACAGGAGCAGATTTGTCTACCTGCagtttatgtAACAAGTCTTTCACGAAAAGTAGTCATCTTGTTAGACATTTACGAACTCATGGCATAGTAGATGAAGAAAAAATGAAAGCTCTGAAGAAGTTTTCAGATACTAAAGGAAAGAAGaTTATGGAATGTGAATATTGTGACCGAAAATTCAAATacagaaaaagttttttacatCATATGCACCAAGAACATGGCATGGATGATTTCGACAGTGATTTAGATAGGGAAGGGGATAAGTCCAAAAAGTCCAAGACTGATACAAAAGAAGAAACAAAAGACTTTACTGGTAAAATAGATGGAATGAAAATTGATAATGTAACTATTGGCGAAACCAAACAAGAAGAAGATGATGATGGAGAAGTGGGTATTCCTGATGCTGAAAATGTGTTTGTTAAAAAGGCACGAAGCAAAAATCAGATATGTCATGTATGTGGTGCCTCATTCTCAAGAGTAAATCATCTTACAAGACATATGACATTGCATCGTGCTGTTTTGGTTCATCAATGTGACagATGTGAAAAAGCGTTTGCTACAGAAGAGCATCTTAAAGTTCATGTTGAAGAAGAACACATAAATAAACCTTATGTTTGTACTGTTTGCAACAAACCATTTAGTAGAGGAGAGCATTTAATAAGACACTTAAAAGTTCATCAAAGTTCTGATAAAGAAGCAAACTTGAAATGTTCCATATGTGATACTACATTCACAAgATCCGATCATTTAGCGCGCCATACGAAGATCCATTTGCTTCAAGACAAACGTCATGTTTGTGGCGAATGCGGTAAAGCTTTCAACCGTTTGGACAACCTAAAGACTCACCAGAGGATCCACACAGGAGAAAAAGATACTTCAAAATTACATCTATGCATCTATTGTGGAAAGGAATTCAATAATTCCAGTAACATGATTGTTCACATGCGTCGTCACACTGGCGAGAGGCCCTACAAATGCAGCGAATGCGGAAAAGGTTTTCCGCGGTCGCACGATTTGAAATGCCACGAACGTACCCATTCAGGAGAAAAGCCTTATCTTTGTACTTTATGTGGCAAATCGTTTAATAAAAGCAACAAATTGCTTCGTCACAGCAGAGTACACACCGGCGAACGTCCTTATGTGTGCAACATTTGTAGCCGAGCTTTTACACAATCAAATGATCTAGCGTTGCATATGCGTAGACATACTGGAGCCCGACCGTACGCTTGTGGCGTATGTCCTGCTCGTTTCATCCAATCTGGACAGTTGAAAACTCACAGAAGAACAACTGGACATTGGATGGACGTTCAGCCCGATTTGAAGGGAGGACACAGAGTAGAGCCCGTTACTCCTGCTCACGAGCCCATGCCTATTAGATTTAAAGTtcatagAACAATGAAAAAGGAGCAGAACATTTTGGAGCAAGCTGGTCTGATGCCGACCCAAGCCTCGACTTCTGAAGGGTTGATGAACAACGAGGGAGTGTCGGCCATCCAGAGTGAACCCCATCGGATAGTGATGGGCATTATGGGTAATCTCAAGATTCCTGGTCCAGATGCTTCTATTCAGCCGCTCCTGATCGACAGCGCCAAATTGGCAGAACTACACAATGCAGGTTTAGTTAATCTGCCGTCCGTCATACAAACCACTAATGGTGatgaaataaaactaaaatctgAAGTTGGTAATTTTGGCATGCCACAAGAAATGGAAAAAAGGGAAGATAACGCCGGTAATTCTTATCAGGACGTGGTTATTTATTCCAGTGTAGGGCACACTTCTACCACTTACACCACAAGTGAAAACTTTACTTTCCagaattttaattag
Protein Sequence: MINKESEFIIDKICRCCMCENENMQNVFETKNEETEDSTTQLSDMLVACASIEVVSGDGLPNKLCKGCEGKLKSAYEFRKLCQKSDTTLRDLTQDTKKGIRHEEDIIVQPDVPDDVFEEEDEDNVSLLQRGLKRKRGRPKKKDVDNLSCQFCHKLLQTKKGLRVHLRSHTGENLRYCLFCDAKYTRTNHLIRHFMTHDKPGLIHPCESCDKTFTEAAELYRHSQDHKDAEEKIKEKIKTEAEIKTEVMPELFGISQEQERKEKSQETEDLGNFSDDNGFNDFPVSDRDDTNGSDEDFAVTLDGKEKRTKSKKKKKIKTENKEKDKALYECKECTKVMTTYIGLKIHMRKHTGADLSTCSLCNKSFTKSSHLVRHLRTHGIVDEEKMKALKKFSDTKGKKIMECEYCDRKFKYRKSFLHHMHQEHGMDDFDSDLDREGDKSKKSKTDTKEETKDFTGKIDGMKIDNVTIGETKQEEDDDGEVGIPDAENVFVKKARSKNQICHVCGASFSRVNHLTRHMTLHRAVLVHQCDRCEKAFATEEHLKVHVEEEHINKPYVCTVCNKPFSRGEHLIRHLKVHQSSDKEANLKCSICDTTFTRSDHLARHTKIHLLQDKRHVCGECGKAFNRLDNLKTHQRIHTGEKDTSKLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCSECGKGFPRSHDLKCHERTHSGEKPYLCTLCGKSFNKSNKLLRHSRVHTGERPYVCNICSRAFTQSNDLALHMRRHTGARPYACGVCPARFIQSGQLKTHRRTTGHWMDVQPDLKGGHRVEPVTPAHEPMPIRFKVHRTMKKEQNILEQAGLMPTQASTSEGLMNNEGVSAIQSEPHRIVMGIMGNLKIPGPDASIQPLLIDSAKLAELHNAGLVNLPSVIQTTNGDEIKLKSEVGNFGMPQEMEKREDNAGNSYQDVVIYSSVGHTSTTYTTSENFTFQNFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01106593;
90% Identity: -
80% Identity: -