Aaln027567.1
Basic Information
- Insect
- Agelastica alni
- Gene Symbol
- Rel
- Assembly
- GCA_950111635.2
- Location
- OX467712.1:16138971-16168106[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-39 1.6e-35 124.2 0.1 2 168 67 257 66 258 0.90 2 2 0.85 1.3e+04 -2.3 0.3 108 149 478 518 473 529 0.70
Sequence Information
- Coding Sequence
- ATGTCTTATCCAAATATGTTAACTCCCCCATCAAGTTCAGAAGACTCTCCACTTTCTGGATATTATGTGTCATCACCAGATTCAACATTGGAATACAAAAATTATGACTTCTCTTCACCTCCCTTTGTCATATCCACATTAAATCCAGCGATTGATCCTGCACTTATTAAAATGGAATCTACAGAAAgAGCATCGTTGCATTTCGTAGAACAACCTACAGATCGATTTAGATTTCGATATAAATCAGAAATGGCAGGTACGCACGGAAGTTTAATTGGTTTAAATTCTGACAAATCACGAAAACCGACTTATCCCACTGTAGAGTTAAAGAATTGTTCCGGAAGAGTAATTGTCAGATGTTCTATCTATCAGTCAAATGCTAATggtaaagattttttgccgcATGCTCATAGGCTTATAATGAAAAAGGGCAAGGAGGAACACGATGACCCACATGATATAGTTATAGGACCAGAAGACGGATATAGAGCAGTGTTCCAAGGGATGGGAATAATTCACACTgcaaagaaaaatattgtatCAGAATTGTCAAGGAAAAAAGCTCAACTTAAAAGAGAATTCATTGCGAGGGTAGAGAATAAAACTAGAGAATTGACAACAAAGGAAACTGTAGAGATTAAAGGATTGGCTGAATCGGAAAGTAAATCAATTAATCTGAATATTGTTTGTCTAAGATTTGACGCTTTCATTAAAGATAATGGTATTTTATATCCCATTTGTGAACCTATTTTTTCACATGGTATCAACAATTTGAAGAGCGCCCTAACGGGAGATCTTAAGATCGTAAGGTTGGATCATGTAGTTAGTCCTGCCAAGGGAAACAAGGAAATTTTCATTCTGGTCGAAAGAGTAACCAAAAaaaatattaaaattcgttTCTACGAAGTTGACGATGAAGATAATGTTGTTTGGGAAGATTGGGGAAAGTTTAATGATCTGGACGTGCACCACCAGTATGCAATTGTTTTTAAAACACCGAAGTATCGCGACGAGAACATTACTGCACCCGTTAATGTTTTTATCGAGTTGGTGCGACCATCAGATCGAGCCCGTTCCGAACCAAGAGAATTCAGGTACATTCCCAATAAGAACAATTTCAAACCCGGCCAGAAACGACCAAGATATTCAGAGTACAATTCATCCAGTTACGAAAGTTCAAATGCAGGAAGCGAAGAATTACCAGTGGTTATTAGTAATTTACATATCGAGCATAATGCTATTACTTCTAATAATCAAAATAATCTGTTGTCCAATATCCCAAGCGGAGTTAGCGAAGAAATATTAAAAGCTATAAACGATATTGACTCTGatgaatttaaacaaatatattcTGCCCACGGTAATGAATTCGCATCATTCTTTGACCCTATTGAGTTTGATGCGGCTCATTTTCCATCTAAtaaatcTGCTAAAGCTGTcagaaataaaacaatttcgacaAATAATCAAAGTTCCATTAAAATGGAAGTTCTAACGGAAGATAAAACGATGGCTTTTAGAGTGGTAGAAGAGTTTAGAAGTTTTATCAAGACGACACATAAACCTCAAACTGCAGTTCAAATGTTGACCCACTATTTTGGCGAAGAAAAACGAACTAATGCTCTACATGTTTCAATCTGTCTAAAGAGCAATGACTCGGCCATGCTTATGTTGAAAATCATAGCGTTTTATAGAATGTTTCCTctcttggaaaaaaaaaataatgatggaTTAACTCCGTTACACCTCGCCGTTCAATGTCATAACGAACCGATGGTGAACGCATTGTTGATGTGCAGAGCTAAAATTTCCACAGCTGATAGTGATTTAAACACGTCTCTACATTTGGCAGTCAAAACGAATGTGTCTACAGAAATATTGGAAATGTTATTGAGAAATAGAGAATGCGAAAGAACAAACGAATACATAGATTTAGAAAATGACGATGGTAACACTGCTCTTGTAATGGCTGTAGAAGCAAAAAAACTATCAACGATAAAGTTACTCTGTATGAAGGATGTTGATTATAACAAACCCCATCCTAAAAATGGTTTTGTTCCTTTGCGAATTGCAATCGAAAAACAATACACGGACATAGTGAAGTACTTTCTATCTTTGATAAATATAAATCCATCAATTAAAGATTTTCAAAATGTATCTCCATTAATGGCTGCTATTAACAAACCATCTTGCGGTGCAATTTTCGAGGCTATTCAAACGTACatgaccaCTCATAATATCGTTTTGGACGTCAAAGAAGAACCAGAAGATGATTCTGACGATGAAATTGAAATGGATgATGAAGTGGATGTGAAGCCTCAGCTGCCTCTCTTATCCTCGGAAGAATTGGAAGAACTGTACAAAGATGTTAAAAATCTTACCCCACAATGTCTGGATGAAGTCTCTACAATTTTGGACCGAAGTGGAAATTGGCAACATATAGCAGAATTGCTTGAAATTGAACACTTGGTCAATAGTGGTATTATTCATTCTGAGACCAGCATGAGCAAAGCAGTGCTTAGCTACGCCATTGATaCCAACAAAGACTCAATTTGGATGATTAGAAGTTTCTTGGAGAATTTAGATGAGCATCATACAGTAGAAATTATTGACAGGATGGTGCGTGAAATGAAGTTgacttaa
- Protein Sequence
- MSYPNMLTPPSSSEDSPLSGYYVSSPDSTLEYKNYDFSSPPFVISTLNPAIDPALIKMESTERASLHFVEQPTDRFRFRYKSEMAGTHGSLIGLNSDKSRKPTYPTVELKNCSGRVIVRCSIYQSNANGKDFLPHAHRLIMKKGKEEHDDPHDIVIGPEDGYRAVFQGMGIIHTAKKNIVSELSRKKAQLKREFIARVENKTRELTTKETVEIKGLAESESKSINLNIVCLRFDAFIKDNGILYPICEPIFSHGINNLKSALTGDLKIVRLDHVVSPAKGNKEIFILVERVTKKNIKIRFYEVDDEDNVVWEDWGKFNDLDVHHQYAIVFKTPKYRDENITAPVNVFIELVRPSDRARSEPREFRYIPNKNNFKPGQKRPRYSEYNSSSYESSNAGSEELPVVISNLHIEHNAITSNNQNNLLSNIPSGVSEEILKAINDIDSDEFKQIYSAHGNEFASFFDPIEFDAAHFPSNKSAKAVRNKTISTNNQSSIKMEVLTEDKTMAFRVVEEFRSFIKTTHKPQTAVQMLTHYFGEEKRTNALHVSICLKSNDSAMLMLKIIAFYRMFPLLEKKNNDGLTPLHLAVQCHNEPMVNALLMCRAKISTADSDLNTSLHLAVKTNVSTEILEMLLRNRECERTNEYIDLENDDGNTALVMAVEAKKLSTIKLLCMKDVDYNKPHPKNGFVPLRIAIEKQYTDIVKYFLSLININPSIKDFQNVSPLMAAINKPSCGAIFEAIQTYMTTHNIVLDVKEEPEDDSDDEIEMDDEVDVKPQLPLLSSEELEELYKDVKNLTPQCLDEVSTILDRSGNWQHIAELLEIEHLVNSGIIHSETSMSKAVLSYAIDTNKDSIWMIRSFLENLDEHHTVEIIDRMVREMKLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -