Amic007674.1
Basic Information
- Insect
- Agara michaeli
- Gene Symbol
- nfxl1
- Assembly
- GCA_018245675.1
- Location
- DWDX01005011.1:5168-7642[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 3 2.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 20 0.022 2e+02 2.7 0.7 4 10 169 175 168 175 0.97 3 20 2.6e-07 0.0024 18.5 15.7 3 19 186 202 185 202 0.95 4 20 1.7 1.6e+04 -3.3 0.9 6 10 227 231 226 231 0.83 5 20 3.5e-08 0.00033 21.2 12.3 3 19 239 255 237 255 0.91 6 20 2.2e-08 0.00021 21.9 11.6 1 19 290 308 290 308 0.99 7 20 1.7e-06 0.016 15.8 18.3 3 19 345 361 344 361 0.93 8 20 0.0068 64 4.3 18.2 3 18 397 412 395 413 0.91 9 20 1.2e-07 0.0011 19.5 18.1 1 18 422 439 422 440 0.98 10 20 2.9 2.7e+04 -4.1 1.6 6 10 469 473 468 474 0.51 11 20 0.00045 4.2 8.1 7.6 9 19 488 498 486 498 0.91 12 20 0.043 4e+02 1.8 7.9 3 12 509 518 508 518 0.90 13 20 0.47 4.4e+03 -1.5 3.5 14 18 547 551 547 552 0.87 14 20 0.23 2.2e+03 -0.6 0.4 7 12 567 572 567 572 0.84 15 20 4.1e-06 0.038 14.6 6.7 1 11 588 598 588 599 0.98 16 20 2.5 2.3e+04 -3.8 1.6 15 18 613 616 613 617 0.87 17 20 0.00018 1.7 9.4 22.1 1 18 628 645 628 646 0.86 18 20 3 2.8e+04 -6.5 3.4 9 13 652 656 652 656 0.71 19 20 0.21 2e+03 -0.4 1.2 9 16 675 682 673 683 0.86 20 20 1.4e-06 0.013 16.1 8.6 1 16 687 701 687 707 0.88
Sequence Information
- Coding Sequence
- atgtcacgaAAATATAGGGACGCAGCTGCAAAGTTGCAGCAAAGTGTgcagaaacatttaaaacaaataaaggaCATCTCTTCTTCGGAAGATGAGGAGCCTTATGAGTCCAGTGTCCTGGAAGCAGCGTTTCAGAGTTACTGGAAAGGTGGGGGGGACACCCAAATGCTGAATAGAACAAAGAACCTTCTAGAAGAAGCTATAAGCGGCCGTACAATTACCTGTCTAATCTGCATCGGGTCGATCAAACGAACGGATGCGATTTGGACCTGCGACCACTGTTACTGCTACTTCCATTTATCTTGCATACAGAAATGGGCCAACGACAGCATATTCCTGATCACAGAGGAACGTCAAGGTCCCGTGGCAGTGGTAGGAGCGAAGAAGATAGAATGGTGTTGCCCAAAGTGTCGGTACGCGTACGTGAAAGAAGAAATACCGCGTCGATACCGATGCCTCTGCGGCAAAACTGAGGACCCGCCCTTCCAGCCGTGGCTGATACCCCACACCTGTGGGGAGGTCTGCGGAAGGAGACTCTCGACAGGCGATAATTGCAGGCACAAGTGTCTTGTCCTGTGTCACCCCGGGCCGTGCCCTCCCTGCCCGCAAACAGTGAATGGAGCGTGTTACTGCCAAAAAGAATCAATGAGAGTCAGGTGCAGCTCTGCCAGGTGGTCCTGCTCAAAGCCATGCAAGAAAATACTGCAGTGCAAGTTGCATAAGTGTGAAACTCTTTGCCATGACGGCGACTGCCCTCCGTGTACTTACACGAGCCTGCAGCCTTGTCAATGTGGTGCCGAGAAAGTAAAAAGACCATGCGATGATTTAAAATGGCAATGTACTAGGAAATGCAATAAGTCATACACCTGTGGGTACCATCAATGTGAGAAAGTATGTCATTTTGGCGAATGCGGTGAGTGCCCCAACTCTGGCATGATGACCTGCCCTTGTGGCACCAATAAGAGGTATGTAGAATGCCCGGATGTAATTGAAACTTGTGTCAGTACTTGTAACAAGAAGCATGAAGACTGTGAACATAATTGTCCCGAAAAATGCCACAAGGGACCGTGCCCACCTTGTCAAGTTGTCGTCGAGAAGAAGTGCTATTGTCTAACACATACCAAATCATTGCCATGCTGCAAAGACTTCAGGTGTGAAACCAAATGTAGAGGAACTAGGCCGTGCAGAAAGCATGGTTGTGGGAAGAAGTGCTGCAATGGCAACTGTCCACCGTGTGAAAAAGTATGCGATAAGCCCTTACATTGTGGTCGCCACAGGTGCACCAATATATGTCATCATGGTCCATGCTACCCCTGCCACCGAGAATCTAAAATAACTTGTCGATGTAAAGAAACCTATGTAACAGTACCTTGTGGTAGAGAAAAACAAACCAAGCCACCAAGATGCAATCATCCGTGTAAAATTAGGTACAAGTGTGGACATGTCACGGAAAACCATCACATTTGTCACTTTGGAGACTGCCCACCATGCAAAGCTGTATGCCTGAAGACTTACACAAAATGTGAGCATAACTGCAAAGCGACCTGCCATGAATATGTTGCTGTGGTTTTCAAGCAGGTAGAGAAACCTGCTACGCCATGGGAAGTTCAGCCGCcgaaaactaaaataatgacCTTGGATTGCCCCCCTTGCGAGGCTCCTGTTCCTGTCACTTGCTTCGGAAATCATGAGGTGGAGCAACAGCCTTGCCATACTGCAACTCGCCGATCCTGTGGCAGGGATTGTGGCCAACCACTAGCTTGTGGCAACCACAAGTGTACACAATTATGCCATTTGCTCAATTATGATGCTGACTATCCTAATGTCCCATACATTTGCAGGCCATGTAACAGAGAGTGCTTAGTGGTCCGACCTGAAAAGTGTGGTCACAAATGTACGAAGAAATGCTGCCATTCCGGGCCATGTCCGCCTTGCGAAATCTTGGAACGAATGCCTTGTCACTGTGGAATCACAGAACTATACTTGCGCTGTAAAGAACTTTCAACAGCTACAGAAGAAATGCTATGTTGCAACCAGCAGTGCCCGAAGAATTTAGCATGTGGACATCGCTGCAAGAATATATGTCACTCTGGCCTATGTAATGAAGATCAGGTTTGCCTGAAGAAAACGAAAGTGTATTGTCCATGTGGTAACATTAAGAAAATAGTGCCCTGCAACGTTGCCCGGAGCTCTGAGAATAATATCGCTTGTGATAACACTTGCGAAGCCAAAGAAAGAGCGGCGAAAATGGAAAGAGAGAAGGAAGAACAGAGGTTAAGGGAGTTGGAAGAGGAGAAAAATCGTAAAGAATTAGCAGAGTATGAATGGAAGTTAAGCGGTAAGAAGAAGAAATATAAAGAGGTTAAGGTTGTGGTGAACACTGATAAACGGAGTTTTCTACAAAAATACTGGGTCCCTATTTTGTCCTTATTTGTGGTAATATTAGCTAcatcttattatatatgttatatgtaa
- Protein Sequence
- MSRKYRDAAAKLQQSVQKHLKQIKDISSSEDEEPYESSVLEAAFQSYWKGGGDTQMLNRTKNLLEEAISGRTITCLICIGSIKRTDAIWTCDHCYCYFHLSCIQKWANDSIFLITEERQGPVAVVGAKKIEWCCPKCRYAYVKEEIPRRYRCLCGKTEDPPFQPWLIPHTCGEVCGRRLSTGDNCRHKCLVLCHPGPCPPCPQTVNGACYCQKESMRVRCSSARWSCSKPCKKILQCKLHKCETLCHDGDCPPCTYTSLQPCQCGAEKVKRPCDDLKWQCTRKCNKSYTCGYHQCEKVCHFGECGECPNSGMMTCPCGTNKRYVECPDVIETCVSTCNKKHEDCEHNCPEKCHKGPCPPCQVVVEKKCYCLTHTKSLPCCKDFRCETKCRGTRPCRKHGCGKKCCNGNCPPCEKVCDKPLHCGRHRCTNICHHGPCYPCHRESKITCRCKETYVTVPCGREKQTKPPRCNHPCKIRYKCGHVTENHHICHFGDCPPCKAVCLKTYTKCEHNCKATCHEYVAVVFKQVEKPATPWEVQPPKTKIMTLDCPPCEAPVPVTCFGNHEVEQQPCHTATRRSCGRDCGQPLACGNHKCTQLCHLLNYDADYPNVPYICRPCNRECLVVRPEKCGHKCTKKCCHSGPCPPCEILERMPCHCGITELYLRCKELSTATEEMLCCNQQCPKNLACGHRCKNICHSGLCNEDQVCLKKTKVYCPCGNIKKIVPCNVARSSENNIACDNTCEAKERAAKMEREKEEQRLRELEEEKNRKELAEYEWKLSGKKKKYKEVKVVVNTDKRSFLQKYWVPILSLFVVILATSYYICYM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00167395;
- 90% Identity
- -
- 80% Identity
- -