Basic Information

Insect: Agara michaeli
Gene Symbol: -
Assembly: GCA_018245675.1
Location: DWDX01001413.1:2828-15937[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 9e-05 0.0072 17.3 1.5 1 23 426 448 426 448 0.96

2 20 0.0004 0.032 15.3 0.6 1 20 454 473 454 476 0.94

3 20 2.2e-05 0.0018 19.3 5.6 1 23 495 517 495 517 0.98

4 20 3.9e-05 0.0031 18.5 4.6 1 23 523 545 523 545 0.99

5 20 3.9e-05 0.0031 18.5 5.3 1 23 551 573 551 573 0.97

6 20 1.8e-05 0.0014 19.5 7.2 1 23 579 601 579 601 0.97

7 20 7.4e-07 6e-05 23.9 2.9 1 23 607 629 607 629 0.97

8 20 0.00011 0.0085 17.1 6.7 1 23 635 657 635 657 0.97

9 20 0.0001 0.0084 17.1 6.5 1 23 663 685 663 685 0.97

10 20 5.1e-07 4.1e-05 24.4 1.9 1 23 691 713 691 713 0.98

11 20 5.2e-05 0.0042 18.1 7.9 1 23 719 741 719 741 0.98

12 20 8.2e-06 0.00066 20.6 6.6 1 23 747 769 747 769 0.98

13 20 1e-05 0.00081 20.3 4.0 1 23 775 797 775 797 0.98

14 20 0.0049 0.39 11.9 7.5 1 23 803 825 803 825 0.95

15 20 2.4e-05 0.0019 19.1 7.3 1 23 831 853 831 853 0.97

16 20 3.2e-06 0.00026 21.9 6.0 1 23 859 881 859 881 0.98

17 20 0.00014 0.011 16.7 10.0 1 23 887 909 887 909 0.97

18 20 5.9e-06 0.00047 21.1 5.3 1 23 915 937 915 937 0.96

19 20 0.00066 0.053 14.6 0.3 1 23 944 966 944 966 0.96

20 20 0.027 2.2 9.5 5.3 1 23 975 997 975 997 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	9e-05	0.0072	17.3	1.5	1	23	426	448	426	448	0.96
2	20	0.0004	0.032	15.3	0.6	1	20	454	473	454	476	0.94
3	20	2.2e-05	0.0018	19.3	5.6	1	23	495	517	495	517	0.98
4	20	3.9e-05	0.0031	18.5	4.6	1	23	523	545	523	545	0.99
5	20	3.9e-05	0.0031	18.5	5.3	1	23	551	573	551	573	0.97
6	20	1.8e-05	0.0014	19.5	7.2	1	23	579	601	579	601	0.97
7	20	7.4e-07	6e-05	23.9	2.9	1	23	607	629	607	629	0.97
8	20	0.00011	0.0085	17.1	6.7	1	23	635	657	635	657	0.97
9	20	0.0001	0.0084	17.1	6.5	1	23	663	685	663	685	0.97
10	20	5.1e-07	4.1e-05	24.4	1.9	1	23	691	713	691	713	0.98
11	20	5.2e-05	0.0042	18.1	7.9	1	23	719	741	719	741	0.98
12	20	8.2e-06	0.00066	20.6	6.6	1	23	747	769	747	769	0.98
13	20	1e-05	0.00081	20.3	4.0	1	23	775	797	775	797	0.98
14	20	0.0049	0.39	11.9	7.5	1	23	803	825	803	825	0.95
15	20	2.4e-05	0.0019	19.1	7.3	1	23	831	853	831	853	0.97
16	20	3.2e-06	0.00026	21.9	6.0	1	23	859	881	859	881	0.98
17	20	0.00014	0.011	16.7	10.0	1	23	887	909	887	909	0.97
18	20	5.9e-06	0.00047	21.1	5.3	1	23	915	937	915	937	0.96
19	20	0.00066	0.053	14.6	0.3	1	23	944	966	944	966	0.96
20	20	0.027	2.2	9.5	5.3	1	23	975	997	975	997	0.99

Sequence Information

Coding Sequence: ATGAATCAAGAACACCACAATATCAATACGGGTGGTGGCCAGCCGCCTGGCAATTCAGAGtcACAGAATCAAAGAGTTCAATCTGCGCAGCAGCAACAGCAGGCCAGTAATCTACCTCCGACAACGTCAGCGACCGACTTGAGAGTAAATTCTGTAAACTCGGCAGCGGTGAACGTAGCTTTGTCGAGCGTTGCCAAGTATTGggtatttacaaatttatttcctGGCCCACTACCACAAGTATCCGTATACAATTTGCCTACGAATGCAAGaattgaaaatggaaaacCTGTACAGGACCTTGGTCAGACCCACGGCATACTCAATGGTGATCCAAATATCATACTCGGACATCATGCAGGTCAACAACAGGTCACAGTGTCCACGGCAGGCCAGCAGTTACCTGTTCCTCAAATTATTGCCACTCAATCTGGACAAACACATGAAGCGCTTGTGACACACGGCCAACAGCAGGAGCTCACAAGCCAGCAGGCGTCGACTGGCGCGCAGGTGACGGTGAGCTCAAGCCAAGGCTCTCATCAGCAGGTACCCAATAACCGGGTCGAGTTTGTACAACACCATAACATTGATATGGGacatcaacaacaacagcaacagcacTTACTTCAACAACAGCTTTTGGCGGCTACTCGGCAGGACCATACGAATCAACagATTCAATTGACAGTAAGCGAAGATGGGATTGTCACCGTGGTAGAGCCGGGATCCAGCAAACTTGTTGACAAGGAGGATCTACACGAGAGTATTAAAATGCCTACAGACCACACCCTCACCGTCCATCAGTTGCAACAAATTGTTGGCCATCATCAGGTAATCGACAGTGTTGTACGGATAGAACAAGCGACCGGCGAACCGGCGAATATCTTGGTAACACAAAATCCGGACGGCACCACCTCCATAGAAACCAGCGTGGCCGATCCGCTCTCCATCGTGAAGGACGAGAAGGCTGTCGGCAAAATTGAAGCAACACAATTCGCCATACCCACTGAGATCAAGGAAATAAAGGAtttaaagAACGTTGGCGCCATGGGCATGGAGGGCGCAGTAGTCAAGATCTCGGCCGGAGCGGCGGAAAACGATCTACACGCCATGTACAAAGTGAACGTCGAAGACCTGTCACAGCTGCTCGCCTACCATGAGGTGTTTGGCAAGCTTAACACGGAGGGGCAACAACAAACTAAGGTTATAAATGAAGTTGAATCGGAAGCTGGAACAAGTGCAGCTATGTCGGAAGCGGACTCCTCGCCCGGTCATCACGCATGTGATATTTgcggaaaaatatttcaatttcgttATCAACTTATTGTGcatagGCGATATCATGGAGAAAGTAAACCATACACATGTCAAGTATGCGGTACTGCTTTCGCTAATCCTGTAGAATTATCAAGACATGGGAAATGTCatttagCGGGTGACCCCGCCGAAAGACAAACGAAGAGGTTAACACAGGACAAGCCGTATGCTTGCACAACCTGCCATAAAACATTCTCACGCAAAGAACACCTCGATAACCACGTGAGAAGTCATACTGGCGAAACACCATACAGATGTCAGTACTGCGCGAAGACGTTCACCCGCAAAGAGCACATGGTGAATCACGTGCGCAAGCACACGGGCGAGACGCCGCACCGCTGCGACATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACGGGTGAAACGCCGCACCATTGCCAAATATGCGGCAAGAAGTATACTAGGAGGGAGCATTTAGTGAATCATATGAGGTCGCATACAAACGATACCCCGTTTCGCTGTGAACTGTGCGGAAAGTCCTTCACAAGAAAGGAACACTTCACCAATCACATATTGTGGCACACGGGTGAAACGCCCCATCGGTGCGATTTCTGTTCAAAAACGTTCACCCGGAAGGAGCACCTGCTGAACCATGTGCGGCAGCACACGGGCGAGTCGCCGCACCGCTGCAACTTCTGCTCCAAGTCGTTCACGCGCCGCGAGCACCTCGTCAACCACGTGCGCCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGCCCCAAAGCATTCACCAGAAAAGACCACTTAGTGAACCACGTGCGCCAACATACGGGCGAATCTCCGCACAAGTGTTCGTTCTGCACGAAGTCATTCACGCGCAAGGAGCACCTCACAAATCACGTGCGGCAACACACCGGCGAATCTCCGCATCGGTGCACCTACTGCGCGAAGTCGTTCACTAGGAAAGAACATCTCACCAATCATATCAGACAGCACACGGGCGAAACGCCACACAAGTGCACGTACTGCCCGCGCGCGTTCGCCCGCAAGGTGCACCTCACCGACCACTTGCGCCAGCACACGGGCGACGCGCCGCACGCCTGCTCCTACTGCAACAAGAGCTTCACGCGCAAGGAGCACCTCGTCTGCCACGTACGGCAACACACGGGCGAGACTCCGTTCAAGTGCACGTACTGTACGAAATCGTTCTCGCGCAAGGAACACCTCACGAACCACGTGCACCTGCATACAGGAGAGACGCCGCACAAGTGTCCCTTCTGCACCAAGACGTTCTCGCGCAAGGAACATCTAACTAATCACGTCAGGATACACACAGGTGAGTCCCCTCATCGATGTGAGTTCTGCCACAAGACATTTACGCGCAAGGAGCACTTGACAAACCACTTGAAACAGCATACGGGCGACACGCCGCACGCCTGCAAAGTGTGCTTCAAACCATTCACCAGGAAGGAGCACCTCAATAATCACATGcgATCACACAGTTGCGGCGAAAGACCGTTCAGTTGTGGCGAGTGCGGAAAATCGTTCGCCTTAAAGGGAAATTTGCTCTTCCACGAGAGGTCTCACAATAAGTCGAATAACGCCAAGTCTTTCCGCTGTGAAGTCTGTTCAAAGGAATTCATGTGTAAAgGTCACCTGGTATCACATCGTCGAACGCACACGGAGGCGGGCGACGGTGCCGCCAACGCGGAGCCGGCGGCCGATGGCGAAGACTGCGGCGACTGCAATAAGTGCGATAAGGACGCACCGGAGCTCCTCGAGCGGAAACACGACACTAGaGCTTCTACTACTGAAAGTAGACCGGCAGAAACCAATGTAGCACAAACCCAACAAAGCAATACGGCCGTGATGCAAATCACAAGTCAACAAGTCCGGACGGCCACACCGAGCAACGCCACCAGCGTAGCGACGGGCACGTTCACGCACACGACGAGCGCGCAGCACCACGCCGGCACCGCGATCGCGCACCACACGGTCACGGTCAACTACTAG
Protein Sequence: MNQEHHNINTGGGQPPGNSESQNQRVQSAQQQQQASNLPPTTSATDLRVNSVNSAAVNVALSSVAKYWVFTNLFPGPLPQVSVYNLPTNARIENGKPVQDLGQTHGILNGDPNIILGHHAGQQQVTVSTAGQQLPVPQIIATQSGQTHEALVTHGQQQELTSQQASTGAQVTVSSSQGSHQQVPNNRVEFVQHHNIDMGHQQQQQQHLLQQQLLAATRQDHTNQQIQLTVSEDGIVTVVEPGSSKLVDKEDLHESIKMPTDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSVADPLSIVKDEKAVGKIEATQFAIPTEIKEIKDLKNVGAMGMEGAVVKISAGAAENDLHAMYKVNVEDLSQLLAYHEVFGKLNTEGQQQTKVINEVESEAGTSAAMSEADSSPGHHACDICGKIFQFRYQLIVHRRYHGESKPYTCQVCGTAFANPVELSRHGKCHLAGDPAERQTKRLTQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRREHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCTYCPRAFARKVHLTDHLRQHTGDAPHACSYCNKSFTRKEHLVCHVRQHTGETPFKCTYCTKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCHKTFTRKEHLTNHLKQHTGDTPHACKVCFKPFTRKEHLNNHMRSHSCGERPFSCGECGKSFALKGNLLFHERSHNKSNNAKSFRCEVCSKEFMCKGHLVSHRRTHTEAGDGAANAEPAADGEDCGDCNKCDKDAPELLERKHDTRASTTESRPAETNVAQTQQSNTAVMQITSQQVRTATPSNATSVATGTFTHTTSAQHHAGTAIAHHTVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00795879;
90% Identity: iTF_00970589;
80% Identity: -