Basic Information

Insect: Agara michaeli
Gene Symbol: MBD-R2
Assembly: GCA_018245675.1
Location: DWDX01003070.1:136-9152[-]

Transcription Factor Domain

TF Family: MBD
Domain: MBD domain
PFAM: PF01429
TF Group: Unclassified Structure
Description: The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.3e-14 7.5e-11 42.1 0.0 4 58 816 870 813 921 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.3e-14	7.5e-11	42.1	0.0	4	58	816	870	813	921	0.89

Sequence Information

Coding Sequence: ATGGTTTTGAAAAAGTGTTGTGTCGAGAAGTGTAAGTCGAGTTCAACTCGGAAGGAGGCGGATGGAGTGACGTATCACAAGTATCCTAAAGACGTTTCTGTGCGCGATGCTTGGGCTCAGGTTACACGGCACGCCGACATTGAAGCCACTACGTATGTGTGCTCACTTCACTTCTATAAGAAAGACTTTCAGATGTATCAGGGCTCTAAATATGTCCTCAAGCCAGGTGCAATCCCATCAATATTTCCATGGACAAAGGCTAAGTTGAAGAAAACAATGGACGAATTGGATCTGTTGGCTGAAGAGCCATGTGTGGATAGTAATAATGCATCCATCATCAGCGGGAACTCTGAGCCGGAAGATCTGGAAGCCattagaaattttattgaGTCTCATGATAGCGCAGCAGCAGTAAAAACCGCCGAAGCAAATACAAAGCCTGAGCTAAAGAAAGGTAGTGAGACAGAAGTGGAAGATGGCACAAGTGACTCTAACATCACAAGCACCAAAGAGGAGACGCTCGCTATAGCCACCAGCGTAATGGactttgtaataaatgaaactgcTGCCAAATTTAAAGATGATAAGCATGATTTGACTCATAGTTCATCGATGCAGAATGACAACTCCGGAGATAAGGgTGCCACCAGCGTGGCTCTTTCTGTCGGTTCTAAGGTGGAGGCAAAGGATTTCGCCGAGAGCTGGTATACTGCCGAAATAGTCGAGGTTGACTATGATGAAATGGAAGTCCTAGTTCGCTTTGAGAATTCTAAAAAACCCGAGGAATGGATAAGTGTCTACAGTCCAAGGTTACGACCAGTGACCGTGGATACTAAACCTGCAGCCGCTGTTGAGGTTGATACTAACGTAATTACTTCCGCTGAAGCGACTCCATTGGTTAACACAGAGGAGATAGTTGAGGACAAACCGAAAGTAATGTTTGCAGTGGGCGAGAGATGCCTGGCTCGATGGAGGGATAATCGTCGTTTTGTTGCAACCATTCAAAAAGATTTGGGTGACGGtagttatgaaataatatttgaagatGGTTTCTTCTGGAAATGCAGCGCTTCGCGGTTGTCTAAGTTGAAAAATTCGACCAAAATCGACGCGTCATCTGACTTGCGCACTTGCTCCACTCCGTCACCCACTCCGGACGCTGGGCCGAGCCCCGCTGCAGTCGCGAGCCCAATGCCTGTCTTGCACAAACATCTGTTTGACCCTACGCGTGATTATTTGGGTTCAAAGAGCGAACGGAGAGAGCTGAAACGCAAATTGAACATAAAGGAAATTTTCAACATTGGTCAAAAGCAAAGAAGAAAGGAGGCGCCAGTTAAGAACGAGAAACCGAAGGAAAAGCCACAAAAGAAACCAAGAAAGTACAATAGTAAAACCAAAACAGCCTTAAAAGCCAATGTTAAGATTCCAAAGAAGGACATTCCCGATGCAATAGCTTCAATAATTGGCACTGTCACTAAAGATGGGTATAGCATTGGGCTTTCGGATGACATCAAATATAAGGATAAACTGAACATTACAAAAGAGGTAGATAACAAAGAAGATAAAACTAATAAGAAAGAATATAAAGAAGAGAACATTCATAGCAGTGAACATTCTCAAGTTAATTCAGAAATTCACGATAATACACATGACTCTCAAGATTTACAGGTGGaagatgttaaaataaaagatgaaCCCGCAAGAGAAGTAGATTTAATATTGACTGATGAGGAAACTCAGAGTGCAAAGATGTCTGATGATGAGTTTGACACGCTAGATGATCATTACGGCACGATGTCGGGAGATCACGATGCAAAGTCGGATCCGATTCAAGAGGAGGAGACTAAACTTCAGAACTTTGAGAAGCCAGATGAGGTGAAACATGAAGAAGTCATTGATCGTATCAAAGAGGCCATCAACAAATTAGAGGACGGGTTGAATAGAGATCTCAATGTCGACAGCCCTAAAGTGGAACCTAAGAAGGAAGAAGTTAAGAAAGAAGAAGCTAAGAAAGAAGATATTAAGATAGAAGAAGTGAAGAAGGAGGAAGATAAGGAAGGAGTAGAATCCCCAAAACCGATCGAAGTGCAGGAAGAAACAACTGTGATAGTAGTGACCCCGAAACCGCTGAAAAAGTCGAAAAAGAGTTCgaagttaaatgaaataagatTGCGGAAGCAAGCGGGAGCTATTGCGACCATAGACGAGTTGAACAACAAGTTGGAAGCGATGAAAGCTAAGATGGATCAGATGGAGACGCAAATGATGCTAAAGACTCAGGCCTTGGAGAAGTTGACACACAAAAAGGAACTGTTGGAAAACAGTGCCACCGCTGAGGAATGGTGTTGCAAATGGTTTAACGGAGAGCCGGTTGGCACTGTTGTGGAGTCAGAGCCAGATAATAGGATTGACGTTGTTAACAAGATAGCATTGCCGCGGAAGACTATacagGTTCACGATAGTAGACTGCCGGATGGGTGGACCAAACTCATGGTCCGTAGAAGCTTAGGCCATTCAGCTGGCAAATGGGACGTTGTACTCGTGAGTCCCGAGAACAGAAAGTTTCACACGAAAACGGACATGCGCCATTTCCTGGAGACCAACACGGACCCAGCTTTAATACCGTACGAGACCGCGCTACTGGACTTCGCGGTACATCTGAAGGTGGCCAGACGCCTGGGCTGGGTCGTCGAAGACAGCAATCACGTGGGCCACATTCGAGTCAAATACCCCATGTCCCTGAAGAGGAAGAAGCTGAAACAGAAGGCCGATAAGGACAGGCGGGCGAAGAAACGCAAGCTTAACGCTGCCGGCAGGTACAAATTTGGTGGGGTTTCTCTATCTGGTGCGAATGAGAGCCATTCTATGGACTCCACTGAAGTGCTATTTGATAACTCTACATTGGAAGATGGTTATGTGTACGTGGGTTCACTGAAGGTTCAGGTAATCGACAACCTCTTGCGCTGTCCCGCCGACGGTTGCTTCAAGAACTTCAGAAATAACACGCTGTTGCAAATGCACATCAAGCACTATCATCGAGACCTGCGTGAAATGCTCGGCACCACGCCCAAAGTCCTCGACCTGGCGTACGCGCGGACCGCGCCGACGGAGGCCGAGGCGAGACCGAAGCACGAGCCGGATAATAGGATCATCAAAGTTAAAATCCCGCGGCCACCCAAACGGATAGAGGAGAGACCGGAGATAAGAGAGACAATCGTCGAGGTCCCAGCTGACCCGGTGAAGGTGCCTGTAAAACCTGAAGCTGGAAAGGTGCCCAGGTCTCTGGATTCCCCCATGGAGCGACAGGTGCAGGCGAATAGACCGGTGAAGAGGCCCAAGGTGCTGTTGCCCGTTAGGAGGCCGGAGCCGGTGGAGCCGGCGCCTGACCTGGGCTGCGTCGACGACATGCCCGACTTCGAACTGCACAACAATCAGCTCGCTTCCAGCGTTTCCATGTCGTCATTGGAGAACATGGACTTCGAGACCAGCATCTCCACGCACACCGTCACCAGGCCGAGCGACGACGTGCGCAAGAGGATCGAGAAACGGAAGGTGTTCGCGACGAACTCGAAGGCGCCGCTCAGCGAGGACGAGGAGATGCTCGGCACCACCTCGGACATAGACACTAGGTCCAGCTTCCCGGGCTCCGCGACGCCCGATTACAGGGCCGCCGAGGCGAAGTGCCCGCTGAAGAAGCCGCCGAGTTCGTCCGAGTCCAACGAGGATCTCGGTTCGCCTCAGTACGTGTATACGGACACGGGCGAGTGCGTGATGTTGGAGCGCATGAAGCGCGACGAGATAATCAACTGCTTCTGCGGCTACCGCGAGGAGGACGGGCTCATGGTGCAGTGCGAGCTGTGCCTGTGCTGGCAGCACGCGCTCTGCTACAACATGCAGCGGGAGTCCGATGTACCAAAGAAGTACACGTGCTACATCTGTCTGAATCCTATCCGGGGCCGCCGCTCGCAGCGCTTCCTGCAGGACCAGGACCGCATGACCGAGGGCCTGCTGCCCGGCGGCAAGCCCTCGGACACGCTGCGCCGCTCGCACGAGCTGTCCGCGCAACTGCTGAAGATGCTCGACGCGCTGCGGGCCCTACGCCTCAAGCACTATGTCGCCATGTGA
Protein Sequence: MVLKKCCVEKCKSSSTRKEADGVTYHKYPKDVSVRDAWAQVTRHADIEATTYVCSLHFYKKDFQMYQGSKYVLKPGAIPSIFPWTKAKLKKTMDELDLLAEEPCVDSNNASIISGNSEPEDLEAIRNFIESHDSAAAVKTAEANTKPELKKGSETEVEDGTSDSNITSTKEETLAIATSVMDFVINETAAKFKDDKHDLTHSSSMQNDNSGDKGATSVALSVGSKVEAKDFAESWYTAEIVEVDYDEMEVLVRFENSKKPEEWISVYSPRLRPVTVDTKPAAAVEVDTNVITSAEATPLVNTEEIVEDKPKVMFAVGERCLARWRDNRRFVATIQKDLGDGSYEIIFEDGFFWKCSASRLSKLKNSTKIDASSDLRTCSTPSPTPDAGPSPAAVASPMPVLHKHLFDPTRDYLGSKSERRELKRKLNIKEIFNIGQKQRRKEAPVKNEKPKEKPQKKPRKYNSKTKTALKANVKIPKKDIPDAIASIIGTVTKDGYSIGLSDDIKYKDKLNITKEVDNKEDKTNKKEYKEENIHSSEHSQVNSEIHDNTHDSQDLQVEDVKIKDEPAREVDLILTDEETQSAKMSDDEFDTLDDHYGTMSGDHDAKSDPIQEEETKLQNFEKPDEVKHEEVIDRIKEAINKLEDGLNRDLNVDSPKVEPKKEEVKKEEAKKEDIKIEEVKKEEDKEGVESPKPIEVQEETTVIVVTPKPLKKSKKSSKLNEIRLRKQAGAIATIDELNNKLEAMKAKMDQMETQMMLKTQALEKLTHKKELLENSATAEEWCCKWFNGEPVGTVVESEPDNRIDVVNKIALPRKTIQVHDSRLPDGWTKLMVRRSLGHSAGKWDVVLVSPENRKFHTKTDMRHFLETNTDPALIPYETALLDFAVHLKVARRLGWVVEDSNHVGHIRVKYPMSLKRKKLKQKADKDRRAKKRKLNAAGRYKFGGVSLSGANESHSMDSTEVLFDNSTLEDGYVYVGSLKVQVIDNLLRCPADGCFKNFRNNTLLQMHIKHYHRDLREMLGTTPKVLDLAYARTAPTEAEARPKHEPDNRIIKVKIPRPPKRIEERPEIRETIVEVPADPVKVPVKPEAGKVPRSLDSPMERQVQANRPVKRPKVLLPVRRPEPVEPAPDLGCVDDMPDFELHNNQLASSVSMSSLENMDFETSISTHTVTRPSDDVRKRIEKRKVFATNSKAPLSEDEEMLGTTSDIDTRSSFPGSATPDYRAAEAKCPLKKPPSSSESNEDLGSPQYVYTDTGECVMLERMKRDEIINCFCGYREEDGLMVQCELCLCWQHALCYNMQRESDVPKKYTCYICLNPIRGRRSQRFLQDQDRMTEGLLPGGKPSDTLRRSHELSAQLLKMLDALRALRLKHYVAM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00025299;
90% Identity: iTF_00025299;
80% Identity: iTF_00025299;