Amic012476.1
Basic Information
- Insect
- Agara michaeli
- Gene Symbol
- TFDP1
- Assembly
- GCA_018245675.1
- Location
- DWDX01010539.1:1-5609[+]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-23 1.1e-19 70.5 0.1 2 65 94 173 93 173 0.97
Sequence Information
- Coding Sequence
- TTAGTTCAAGTGCCAGAGGAAGCATTTGCTCATTTACAAAAAGTTACTTTTCCAACTTTCATCAAAACAGAAGATCAGCGAGATCAAGCAGAGTTAAATTTTATACCTGCTGAACAAGTGCCAGTCATTGGAAAATCTGATCTTGACATTTTTAGaacagttaatataaaaacagaagATCTTCCTGCAATGTCTCATGCATCTAGGAGAAGACATGATTCTGACAATGACCCCCCTACAGAGTACACTACAAAAAGGCGTAAACATGCTGACAAAGTCGGCAAAGGATTAAGGCATTTTTCTATGAAGGTGTGTGAGAAAGTAAGAAACAAAGGTTTCACATCTTACAATGAGGTTGCAGATGAACTAGTTCTGGAATTTGCTGCTGGCATGCATGGTTCTGCAGACAGCCAACAATATGATCAAAAGAATATTCGACGAAGAGTTTATGATGCACTTAACGTATTAATggcaatgaatataatatcaaaggagaaaaaagaaattagaTGGCTTGGTTTACCAACAAATTCTGTTCAAGAATGCACAGCATTAGAAAAAGAGAAACAGTCAAAAATAGagcaaatacaaaaaaagacACAACAGTTACaagaattaatattacagcacatttcattcaaaagtttaatagaaagaaataaagaggCAGAAAGTAAAGGTTTAAAACCATCACCTTCGTCAGCTATACATCTGCCATTTATAGTTGTAAATACTAGTGATAAAGCTTTGATTGATTGTAGTATTTCCAATGAcaaAACTgaatatatgtttaatttcaacaaGAGATTTCAAATACACGACGATATTGACATATTGAAACGAATGGGATTGCTATTTGgATTAGATAAAGGTGAATGTACTGAAGAAGATCtcgaaaaagtaaaaagtatgGTACCAAAGTCATTGGAATATTATGTTGAACaaATGGGGCGAGGTGTTGATACTTCTATATCTAATATTCTTAAAGAAGAAGTTATAGATGAAGGTGGGGATGATGAAGACGATGCACTGGGAGAGCAGGATGCCGAAGAAGAACAAGAAGAAGCTGACGCCAATGAGTACAGTGAAGACAGCAGTGATGTAGATGTCTag
- Protein Sequence
- LVQVPEEAFAHLQKVTFPTFIKTEDQRDQAELNFIPAEQVPVIGKSDLDIFRTVNIKTEDLPAMSHASRRRHDSDNDPPTEYTTKRRKHADKVGKGLRHFSMKVCEKVRNKGFTSYNEVADELVLEFAAGMHGSADSQQYDQKNIRRRVYDALNVLMAMNIISKEKKEIRWLGLPTNSVQECTALEKEKQSKIEQIQKKTQQLQELILQHISFKSLIERNKEAESKGLKPSPSSAIHLPFIVVNTSDKALIDCSISNDKTEYMFNFNKRFQIHDDIDILKRMGLLFGLDKGECTEEDLEKVKSMVPKSLEYYVEQMGRGVDTSISNILKEEVIDEGGDDEDDALGEQDAEEEQEEADANEYSEDSSDVDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01152839; iTF_00775852; iTF_00778588; iTF_00124029; iTF_01359511; iTF_00287854; iTF_01082232; iTF_00795492; iTF_00887217; iTF_01438692; iTF_00971027; iTF_00166743; iTF_00970202;
- 90% Identity
- iTF_01152839;
- 80% Identity
- -