Avir015162.1
Basic Information
- Insect
- Agapostemon virescens
- Gene Symbol
- Rel_1
- Assembly
- GCA_028453745.1
- Location
- CM052091.1:7173263-7177677[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-37 1e-33 117.4 0.5 1 168 79 269 79 270 0.89 2 2 1.9 1.9e+04 -3.9 0.4 102 122 784 804 769 833 0.54
Sequence Information
- Coding Sequence
- ATGCCAGTAAGTTTCGGAAATTGTTCGACTTACCAAAGTGTAACTGAGATCCAAGACAATTCTCTTGATGAATACGATGTAATATCGAGTATATTTAATCGTCGAAATCATCATTCTGACGAATTTCAAGGGATAAGCATGGCATTACCTAATTTATCATCTGAGTCGCCACAGTATAACATAGATGTACAACCGAACAATTTGAAGGATATTATATTTGACTGTGAACCATATCTTACAATTTTGGAGCAACCAATTGAAAAATTTCGATTTCGATATAAATCAGAAATGGTAGGAACGCATGGGTGTTTAGTAGGATCAAATGCTGGAAGGGAACGTAATAAGCATGCACCAACAGTTCAGTTACATAATTTTCCTGTAAATGCAAAAATGCAATGTACATTAGTTACATCTACAGAAGGTAAAAGGATACCTCATGCCCATAGATTGGTACGTAGAGTAAATGGGAACGATTGTGATGATCCCCATATACTTGATGTCACCCCAGAAAATGATTTTATTGCAACGTTTCATGGGATGGGAATTATACACACAGCAAAGAAATATGTACGAGAAGAACTTATTAAAAAAATGCGATATGAAGCAATGGAAAAAAAGAAAAGAGAATGTGGAAGTAATATCCTTACTACTCGAGAGGAAGCTCAGATCAAATACGACGCAGATACTTATCAAAAATGTGTGAACCTAAATAGTGTTGCACTATGTTTTCAAGCATTCATTTTGGATGAATATAATATTATGAGACCAATACCAAACTGTATTATCTACTCAAATCCTATTAACAATTTGAAAAGTGCATTAACTGGAGAATTGAAGATATGTAGAATTGACAAACACACTAGCAGTGTTGATGGAGGAGAAGAAGTTTTCTTGCTCGTAGAAAAAGTAGGAAAAAAGAACATAAAAGTAAGATTTTTTGAAATAAATGATGATAACCTCGAAGTTTGGAGTGACTATGGACGTTTCTCGGAATTAGATGTACACCATCAATATGCAATTGTATTCCGAACACCGCAATATAAAGATGTTAATATTACATCCCCAAAGGAAGTGTTTCTACAACTAGAAAGACCAACTGATGGTGATTGTTCTGATCCAGTAAAATTTACTTATAAACCCAGCGATAGAATTATGGGAAGGAAGCGTCAAAGAATAGAATATTGTGAAACTGACGATTTACCGAACTTGATGTTATCTGGTTTTGATAGTGAAACAGCCAGTACATCAGGAATTTCAAGTGCAGATAGTCAAGAAATTTCCCAAGAAATTAAAAAGCATTTTTTCCAGACTGGAAACACATTTCTTGATAATCTAAATATTGATGAATATATATCACTCTATATAAACAATGAAGACAACTTGGTGACTGATGGTCCATCACCTAAACAACATGAAAATGATATAATGTTTCCTAAAAATATACTTATGGAAGCTATTTCATATATGAAATCAGATCCAATGAATAGTCGAACACATATACATAAACTACTTAAACATCGCTTCACTTTTGGAGATACCCCATTGCATGCAGCCCTTCGGTATGGACAACGTGATATCGTCAAGTACATATTAATGTTAATAAGCTATGATAAGGATTGCAAAATACTGGTCAACGAACAGAACAGTTCTGGCAAAACACCGCTGCATTATGCAGTTCTACAAAATTTCCCGGTAATTATAAATTTATTACTCTCGTTTGGAGCTGATCCAAACCGATCAGATGAACAAGGGTGCTGTCCATTACATATTGCTGTGAAAAATCCTCAAACTAGTGAATGTGTGAGAACTTTATTATCGGATAAAAGAACTAAAATGGAAATTCATAATGACGCTGGATGGACACCATTGCAACTTGCAGCAGAAGCTGGTTCATACAATGCAGTATGTTTACTTGTTGAAGCTGGGGTAAATGTAAATAGTACCGATATGTCATATGGTCGAACTGCATTACACATTGCTGTAGATGGCGGACACAAAAAAATCGTTGAATATTTATTGAAAACGACACGCATTGCTATAAACAAAAGAAACTTCAGCGGAAATACTGCTTTACATGCGGCAGTTGTATATTCTGGTGCAAGAGCGAAAGAGTTGTGTGCTTTGTTAATCAAATATGGAGCAAATCCATATATTCAAAATCATAATACAGAAACAAGTGATGATGAAAGGGAAACCACACATGTAAAAGAAGAAGTTAACTCCGACAATGAAATTCCTGAAGAGTTGAATGGACAATCATCATTTGATTTGGCGACGAATAAACCAGATATTTTGGAGCTTCTTAACGTTCAAACTGAAGAAGCACAAAATGAAACGTCTTCTATTTCTACTAAACAAGAAGTACAAGATGAGACCTCGCAGGAGTTGTTAAACAATGAACAGAAACAACAATTGTCCGCTATTCTTGATGAAAGACAAGGTTGGCAAAAACTTGCTAAACGCTTAAAGTTTGAATACATTTTACAGACATTACAAGAAACTTCATTGAGTCCATCGTTACTACTATTAAATTGCATAGACGTTCACGCCTTGATATCCCTGTCCGATCTGGAAATAGCTTTAATAGATATTGGAGAGACGGAAGCAGCGAATTATGTTCATGGAATCTTAAatgtatccacgcagtcttaa
- Protein Sequence
- MPVSFGNCSTYQSVTEIQDNSLDEYDVISSIFNRRNHHSDEFQGISMALPNLSSESPQYNIDVQPNNLKDIIFDCEPYLTILEQPIEKFRFRYKSEMVGTHGCLVGSNAGRERNKHAPTVQLHNFPVNAKMQCTLVTSTEGKRIPHAHRLVRRVNGNDCDDPHILDVTPENDFIATFHGMGIIHTAKKYVREELIKKMRYEAMEKKKRECGSNILTTREEAQIKYDADTYQKCVNLNSVALCFQAFILDEYNIMRPIPNCIIYSNPINNLKSALTGELKICRIDKHTSSVDGGEEVFLLVEKVGKKNIKVRFFEINDDNLEVWSDYGRFSELDVHHQYAIVFRTPQYKDVNITSPKEVFLQLERPTDGDCSDPVKFTYKPSDRIMGRKRQRIEYCETDDLPNLMLSGFDSETASTSGISSADSQEISQEIKKHFFQTGNTFLDNLNIDEYISLYINNEDNLVTDGPSPKQHENDIMFPKNILMEAISYMKSDPMNSRTHIHKLLKHRFTFGDTPLHAALRYGQRDIVKYILMLISYDKDCKILVNEQNSSGKTPLHYAVLQNFPVIINLLLSFGADPNRSDEQGCCPLHIAVKNPQTSECVRTLLSDKRTKMEIHNDAGWTPLQLAAEAGSYNAVCLLVEAGVNVNSTDMSYGRTALHIAVDGGHKKIVEYLLKTTRIAINKRNFSGNTALHAAVVYSGARAKELCALLIKYGANPYIQNHNTETSDDERETTHVKEEVNSDNEIPEELNGQSSFDLATNKPDILELLNVQTEEAQNETSSISTKQEVQDETSQELLNNEQKQQLSAILDERQGWQKLAKRLKFEYILQTLQETSLSPSLLLLNCIDVHALISLSDLEIALIDIGETEAANYVHGILNVSTQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -