Avir014525.1
Basic Information
- Insect
- Agapostemon virescens
- Gene Symbol
- Bgb_2
- Assembly
- GCA_028453745.1
- Location
- JAQQRL010033432.1:893-1231[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-32 4.6e-28 98.7 0.1 93 162 8 77 3 82 0.95
Sequence Information
- Coding Sequence
- ATGTGTTTTTCGTTTCGGTTGCAGGTGCATCTCAGGGCGCAGATGATAATGAACGGCGTTTGCGTGCTGTGGCGAGGATGGATCGACCTGGAGAGGCTGGACGGTGTCGGTTGTCTGGAATTCGACGAGAAACGGGCCGCCGAAGAGGACGCTATCCTTCGGGAACAGGTCGAGCGCTATAGTCAACGGCAACGGGACCTGGACGAGAAGCAGAGGGCTTACAGAAGCGGCGCGGCCCATTTGAACCATCACCATCATCATCATCACCATCACCACGGCCACCACGGGCACCACGTGACGGCCGGGGTCGGAACCGGGACCACGGGAACGTTTTCGTAA
- Protein Sequence
- MCFSFRLQVHLRAQMIMNGVCVLWRGWIDLERLDGVGCLEFDEKRAAEEDAILREQVERYSQRQRDLDEKQRAYRSGAAHLNHHHHHHHHHHGHHGHHVTAGVGTGTTGTFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00762321;
- 90% Identity
- -
- 80% Identity
- -