Acni012415.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aethes cnicana
Gene Symbol
-
Assembly
GCA_963971205.1
Location
OZ020282.1:9556186-9575264[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.00011 0.0072 17.3 1.5 1 23 407 429 407 429 0.96
2 20 0.0045 0.31 12.2 1.6 1 20 435 454 435 457 0.94
3 20 3.7e-05 0.0025 18.8 4.6 1 23 476 498 476 498 0.98
4 20 0.00023 0.016 16.3 4.7 1 23 504 526 504 526 0.99
5 20 4.6e-05 0.0031 18.5 5.3 1 23 532 554 532 554 0.97
6 20 9.8e-06 0.00067 20.6 7.1 1 23 560 582 560 582 0.97
7 20 8.8e-07 6e-05 23.9 2.9 1 23 588 610 588 610 0.97
8 20 0.00013 0.0085 17.1 6.7 1 23 616 638 616 638 0.97
9 20 2.4e-05 0.0016 19.4 6.4 1 23 644 666 644 666 0.98
10 20 0.00076 0.052 14.6 0.5 1 16 672 687 672 688 0.97
11 20 6.1e-05 0.0042 18.1 7.9 1 23 737 759 737 759 0.98
12 20 3.2e-05 0.0022 19.0 6.3 1 23 765 787 765 787 0.98
13 20 4e-06 0.00028 21.8 5.5 1 23 793 815 793 815 0.98
14 20 0.0015 0.1 13.7 5.5 1 23 821 843 821 843 0.97
15 20 2.9e-05 0.0019 19.1 7.0 1 23 849 871 849 871 0.97
16 20 3.8e-06 0.00026 21.9 6.0 1 23 877 899 877 899 0.98
17 20 1.3e-05 0.00092 20.2 7.6 1 23 905 927 905 927 0.97
18 20 1.1e-06 7.8e-05 23.5 3.1 1 23 933 955 933 955 0.96
19 20 0.0009 0.061 14.4 0.3 1 23 962 984 962 984 0.96
20 20 0.026 1.8 9.8 5.0 1 23 992 1014 992 1014 0.99

Sequence Information

Coding Sequence
ATGAATCAGCACCACAATATCAATACGGGTGGCGGCCAGCCCCCAGGAGATTCAGAGTTTCTGAGTATAAGAGTTCAATCTACTcaacagcagcagcagcagcagacGACGAATCTAACCCCTACGACATCTGCAACCGACCTGCGAGTCAACTCTGCGGCGGTAAACGTTGCTTTGTCTAGTGTTGCGAAGTATTGGGTGTTTACAAATTTATTCCCGGGACCCATACCACAAGTTTCGGTATACGGATTACCTACGGGAACACGTATAGAAAATGGAAAGCCAGTtcaggACCTTGGTCAAGCCCATACAAGCATTCTTAATGGTGATCCAAATATTATACTTGGGCACCACACAGGGCAGCAACAAGTTACTGTTTCTGCCGCTCAACAGTTACCACAAATCATAGCAACGCAAACACAAGCTCATGATGTATTAGCCCATGCACAACAGCAAGAGCTGGCATCCCAGCAGGCCACCGGAGTCACTGCCCAGGTGTCGGCCAGCCAAGCCACCCACCAGCAGGTAGCCAATAACCGCGTCGAGTTTGTACACCATAACATTGATATGCAACATATGATGCAGCAGCAGCTTATGGCAAGACCGGAACACTCCAACCAGCAGATCCAGCTAACAGTGAGTGAAGATGGAATAGTCACAGTTGTGGACCCCGGCGGGGGCAAACTGGTTGATAAGGAAGAGTTGCATGAAGCCATCAAGATGCCTGGCGATCATACCCTGACTGTGCATCAGTTGCAGCAGATAGTCGGCCAACAGGTGTTAGAGAACGTGGTCCGCATAGAGCAAGCGACCGGCGAGCCGGCGAACATTCTGGTGACGCAGAATCCCGACGGCACGACGTCCATCGAGGCCAGCGCCGCCGACCCGCTCGCCATCGTCAAGGACGAGAAGAGCGGCAAAATAGAGACCGCGCACTTCGCGCTGCCCGCAGAAATCAAGGACCTCAAGAGCATAGACTTGAAGAGCGCGATGGGCATGGAGGGCGCTGTGGTGAAGATCTCCGCTGGCGccagcgagcatgacatgcacGCCATGTACAAGGTCAACGTCGAGGACCTGTCGCAGCTGCTGGCCTACCACGAGGTGTTCGGCAAACTCAACGCCGACACGCAGCCGCAGACCAAGGTGATAGGCGAAGTGGAGGTGGAGGCGGGCACGAGCGCCGCCATGTCGGCCGAGGAGTCCTCCCCGGGGCACCACGCGTGCGACATCTGCGGGAAAATATTCCAGTTCCGGTACCAGCTCATCGTGCACAGACGTTACCACGGAGAGAGGAAACCGTTTACGTGTCACGTTTGCGGATCGGCTTTCGCAAATCCTGTCGAATTGTCGAAGCACGGAAAATGCCATCTAGCAGCTGATTCAGCCGACCGGACGGCGAAACGATTGACCCAAGACAAACCCTACGCGTGCACGACCTGCCATAAAACGTTCGCGCGAAAGGAGCACCTCGACAACCACGTCCGCAGCCACACGGGAGAGACGCCTTACAGATGTCAGTTCTGCGCAAAGACCTTCACTCGCAAGGAGCACATGGTGAATCATGTACGGAAGCACACGGGCGAAACGCCGCATCGCTGTGATATTTGCAAGAAGAGTTTCACTAGGAAAGAGCACTTTATGAACCACGTCATGTGGCAcacagGTGAAACACCACACCATTGTCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGCGAACCATATGAGATCCCATACAAACGATACCCCGTTCCGCTGCGAACTCTGTGGGAAATCCTTCACGAGAAAGGAACACTTCACCAATCACATATTGTGGCATACTGGTGAAACGCCCCATCGCTGCGACTTCTGCTCGAAAACGTTCACTCGCAAGGAGCACCTTTTGAACCACGTCCGGCAACACACGGGCGAGTCTCCCCACCGCTGCAACTACTGCTCCAAGTCGTTCACGCGGCGCGAGCACCTCGTCAACCACGTGCGCCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGCCCCAAGGCCTTCACCCGCAAGGACCACCTGGGTATAGGCTTTTTAATATTACTAACAGCAGTGAACacaacgccacctgcttctatccaagcatatctccctCGTCTCTTCAAGCAAGCTAAATTAGTTTCAAATCTTCCAGTGAACCACGTCCGGCAGCACACGGGTGAATCGCCGCACAAGTGCTCGTTCTGCACCAAATCGTTCACGCGCAAGGAGCACCTGACCAACCACGTCCGACAGCACACCGGGGAGTCACCCCACCGGTGCAGCTACTGCGCCAAGTCATTCACGAGGAAAGAACACCTGAACAACCATGTCAGGCAGCACACGGGAGAAACTCCGCACAAATGCACGTTCTGCCCGAAGGCCTTCTCCCGCAAAGAGCATCTCAACAATCACATACGGCAGCACACCGGCGACTCTCCCCACAGCTGCTCCTACTGCAACAAGAGTTTCTTGAGGAAAGAACACCTTGTCAACCATGTCAGGCAACACACAGGCGAGACTCCATTCAAGTGCTCGTATTGTTCCAAATCGTTTTCACGCAAGGAGCACTTGACAAACCACGTGCACCTCCACACGGGAGAGACACCGCACAAGTGCCCCTTCTGCACCAAGACCTTCTCGCGCAAGGAGCATCTCACCAACCACGTCAGGATACACACAGGAGAATCTCCGCATCGCTGTGAATACTGCCAGAAGACGTTCACGCGGAAGGAGCACCTAACGAACCATCTGAAGCAGCATACTGGAGACATGCCTCACGCGTGTAAAATATGCTCCAAGCCCTTCACCCGCAAGGAGCATCTTGTCGCACATATGAGGTCGCACAGCTGCGGCGAGCGGCCGTTCAGCTGCGGCGAGTGCGGCAAGTCGTTCCCGCTCAAGGGCAACCTGCTGTTCCACGAGCGCTCGCACAACAAGGGCGCCGCGCGGCCCTACCGCTGCGACGTCTGCTCCAAGGACTTCATGTGCAAGGGCCACTTGGCGTCGCACCGGCGCACGCACAGCGAGCCGGCGGCCGAGGGCGCCGCGGACGCCGCCGAGGACTGCGGCGACTGCGTCAAGTGCGAGAAGGACGCCGCCGACCTGCCCGAGCGGAAACACGAAGTCAGGCAAACCACGGAAAGCAGACCTGAAGAAAGCGACGTCGTACAAAACCCCCAAGCTAATGCAACCGTGATGCAAATTACCAGTCAACAGGTGCGGGCGGGAGGGAGTACGAGCGCCGCGGGCGTCACCAACGCCACGTTCACGCATTCTACCGGCGCGCACCACCCAGTCACCGTCAATTACTAG
Protein Sequence
MNQHHNINTGGGQPPGDSEFLSIRVQSTQQQQQQQTTNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDLGQAHTSILNGDPNIILGHHTGQQQVTVSAAQQLPQIIATQTQAHDVLAHAQQQELASQQATGVTAQVSASQATHQQVANNRVEFVHHNIDMQHMMQQQLMARPEHSNQQIQLTVSEDGIVTVVDPGGGKLVDKEELHEAIKMPGDHTLTVHQLQQIVGQQVLENVVRIEQATGEPANILVTQNPDGTTSIEASAADPLAIVKDEKSGKIETAHFALPAEIKDLKSIDLKSAMGMEGAVVKISAGASEHDMHAMYKVNVEDLSQLLAYHEVFGKLNADTQPQTKVIGEVEVEAGTSAAMSAEESSPGHHACDICGKIFQFRYQLIVHRRYHGERKPFTCHVCGSAFANPVELSKHGKCHLAADSADRTAKRLTQDKPYACTTCHKTFARKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLANHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGIGFLILLTAVNTTPPASIQAYLPRLFKQAKLVSNLPVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCSYCAKSFTRKEHLNNHVRQHTGETPHKCTFCPKAFSRKEHLNNHIRQHTGDSPHSCSYCNKSFLRKEHLVNHVRQHTGETPFKCSYCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEYCQKTFTRKEHLTNHLKQHTGDMPHACKICSKPFTRKEHLVAHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKGAARPYRCDVCSKDFMCKGHLASHRRTHSEPAAEGAADAAEDCGDCVKCEKDAADLPERKHEVRQTTESRPEESDVVQNPQANATVMQITSQQVRAGGSTSAAGVTNATFTHSTGAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00289860;
90% Identity
-
80% Identity
-