Basic Information

Gene Symbol
-
Assembly
GCA_963971205.1
Location
OZ020298.1:6096618-6103385[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 43 3.2 2.2e+02 3.3 0.5 2 23 12 34 11 34 0.89
2 43 0.01 0.7 11.1 2.3 1 23 105 127 105 127 0.98
3 43 0.0083 0.56 11.4 0.1 2 23 153 175 152 175 0.95
4 43 0.0011 0.075 14.1 1.4 2 23 224 246 223 246 0.96
5 43 3.4 2.3e+02 3.2 0.2 3 23 358 379 356 379 0.92
6 43 3.8 2.6e+02 3.0 0.0 3 23 403 425 402 425 0.93
7 43 0.01 0.7 11.1 0.2 2 23 431 453 430 453 0.94
8 43 0.0031 0.21 12.7 0.2 2 23 459 481 458 481 0.92
9 43 0.022 1.5 10.0 0.7 1 23 486 509 486 509 0.93
10 43 0.0025 0.17 13.0 3.5 1 23 513 536 513 536 0.97
11 43 0.0065 0.44 11.7 0.7 2 23 543 564 542 564 0.96
12 43 0.43 29 6.0 0.7 1 10 570 579 570 583 0.96
13 43 0.0036 0.24 12.5 0.3 1 23 623 645 623 645 0.98
14 43 0.082 5.6 8.2 0.1 3 23 674 695 672 695 0.93
15 43 0.013 0.89 10.8 1.1 2 23 716 738 715 738 0.95
16 43 0.0039 0.27 12.4 3.2 2 23 744 766 743 766 0.96
17 43 0.26 18 6.7 0.4 1 23 771 794 771 794 0.94
18 43 0.00067 0.046 14.8 1.6 3 23 798 819 797 819 0.97
19 43 9 6.1e+02 1.8 0.2 2 19 826 843 825 846 0.88
20 43 0.011 0.77 11.0 5.0 1 23 901 924 901 924 0.96
21 43 0.12 8.3 7.7 0.0 2 23 952 974 951 974 0.96
22 43 0.00033 0.022 15.8 0.3 1 23 996 1019 996 1019 0.91
23 43 1.6e-05 0.0011 19.9 0.3 3 23 1026 1047 1024 1047 0.95
24 43 0.00058 0.04 15.0 2.8 1 23 1053 1076 1053 1076 0.96
25 43 0.00066 0.045 14.8 0.0 3 23 1083 1104 1081 1104 0.92
26 43 0.0004 0.027 15.5 4.3 1 23 1108 1131 1108 1131 0.97
27 43 0.18 12 7.2 0.4 2 23 1138 1159 1137 1159 0.96
28 43 0.061 4.2 8.6 1.6 1 23 1165 1187 1165 1187 0.96
29 43 0.011 0.73 11.0 1.6 1 23 1237 1259 1237 1259 0.95
30 43 0.44 30 5.9 0.0 3 23 1288 1309 1286 1309 0.94
31 43 0.0087 0.59 11.3 0.6 1 23 1329 1352 1329 1352 0.96
32 43 0.00068 0.046 14.8 0.4 1 23 1357 1380 1357 1380 0.94
33 43 0.002 0.13 13.4 1.4 1 23 1385 1408 1385 1408 0.98
34 43 0.00064 0.043 14.9 1.3 2 23 1411 1433 1411 1433 0.96
35 43 8 5.4e+02 2.0 1.2 2 21 1440 1459 1439 1460 0.90
36 43 0.0037 0.25 12.5 1.5 1 23 1517 1540 1517 1540 0.97
37 43 0.019 1.3 10.2 0.3 2 23 1613 1636 1612 1636 0.94
38 43 0.00014 0.0094 17.0 0.3 3 23 1643 1664 1642 1664 0.94
39 43 0.07 4.7 8.5 4.3 2 23 1669 1691 1668 1691 0.93
40 43 0.0013 0.09 13.9 3.4 1 23 1696 1719 1696 1719 0.98
41 43 1.3e-05 0.00088 20.2 5.0 1 23 1723 1746 1723 1746 0.97
42 43 0.00093 0.063 14.4 0.3 2 23 1753 1774 1752 1774 0.96
43 43 2.6e-05 0.0018 19.3 0.4 1 23 1780 1802 1780 1802 0.98

Sequence Information

Coding Sequence
ATGCATATGGAGCAGTATAAATTGGAGAAACTTAAATGTGTGCACTGCGAAGAAAAGTTCCTATATCCGTCTTTCCTAGTAGCGCACAATCAAGAAGATCATCCGCTGCGTTGGTGGTCTTGCGATGAATGCTTTGTTATTTCTAATGGCATGGCAGGGAGTCACAACCACAACCACGTGGTCGGTCAAGGAAAATTCTCATATGATAAACCGCACAAAAAGGCCTGCGAATTAACGGCAGCGCGACGCCGACAAAATCTGCAAACGCTGTTTCGCAACTCGGGCGTAATACCGTTCGAATGGCGCGACATTTACTCTTGCACTTACTGTAAACGTACGGGATTCCAGTACGACGAACTCGTCAAACACACCAAATCGCACGAAAAGGGTTTGATCAAAGAATTCTTTGCTAACTTGCGACCAAAAGTCTTGCTCAAAGTAGACGTTTCCGATCTGTCATGCGAACTATGCGATGAAAGTTTCCAAAATTTAGACGCATTAGTCGACCATCTCGTTACAAAACACGAATTGAAATTTTACAGCAAAGTACCGTTGGATATAGAACAGTTTAAGTTGATAGACTTGAGCTGTCCTCTGTGTGCAGAGAATTTTTCCGAAATGGAAATTCTTAATGTCCATGTCAGTAATACGCATTCAACCAATAACTTACAATGTGAATTGTGCTCAGAAATGTTTAGCAAAAAAAAGGACTTGAAGTTGCATAAAAAAATGCTACATGCAGACGACTACGATTTCACTCGAGTAAAATGTTCCGTGAAACTGGAGtcagaaataaataattaccaaTTGAAAATCTTCGATGCagcagaaaataaaaaaatcgccAAGCTCAGGCGCGATAATATAGCGTGTATTTTGAATACGTCCACCGCAACGCCTTTTAAATATTATATGAACCGTTTTCGATGTTTCTACTGCGCTAAAAATCATACGGAGTTTGAGCCCATCCGAAGTCACATAGTCAGTAAACATCCTTATTGCGATCCAGATTACCTGAAGTCCATCAAAGGCAAAGATGCGATCGTCAAAATAGACATCACCAGCCTCGCCTGTAAATTATGCAACATGGCAATGAATGATTTAGACGCACTCTCCCATCACTTAGTTTCAAATCACAAAATCAAATACGATAAATCCATGATAAGTATAGTTCAGCCGTTTAAAATATCGAAAGACAACATGGCGTGTCCTATTTGCCCCAACGTCGCATTTAGGTACTTTGTTAAGTTACTCGAACATATGAACGAAAGCCACTCTAATAACAATGTCGTTTGTGTATACTGCGGCCAAACGTTTAGGAATACGCCGTCATACAGAGGGCATTTGGCGAGATAtcaccggtcaagtgcgtgcaAGTGTCCAGACTGTGATTTAGAGTTTCCGAACATAGCCAAGTTAACCGCACACAGAGCCAACGCACACGGCATGAAGTCTTTCAAATGTTCTACATGCAACGAGAAATTTGCAACAGTATATCTTAGGCAGAAGCATCTCATAGACGCCCACGGTTCAGGCCATAAATGCTCCTTCTGTGATAGGCTATTCGCCCGAAATTCGTACATGAAGGACCACGTCAGAAGACTCCATTTGAAGGAGAAGAACGTGGAATGCTCAGTGTGTAAAGAAAAGTTCTTCGATAAAACCCGCTTGAACATCCACATGGTGAAGCATATAGGGGAAAGAAACTATCACTGTGATATTTGCGGGAAGACATTTCTTTGGAAGAAAAACCTCAGAGATGAAATTGGGCTGAAAAACGTGAAAAGCGTCAATTATCGCAGGAGGAGAAATCTGCAAATATTACTCAACAATACCTCGATGATACCGTTCAAATGGCGCCAAAAATATATGTGTTTTTACTGTGGGGAGGACGTTGAAGACTATGATATGCTAAGAAAGCACACGAGAGCGCACGGCACATGCTCGCTCACCGACCGCGCGCTGAAACGGGTCTCGGGCACCGACGTTGAAATTAAAATAGACGTTTCCGATACTATATGTGAAATTTGCGATGAATCCCTAATCAATTTTGATGAATTAATCGATCATTTAATCCATAAACACAATCTACCTTACGATAACCACACAGATCTTATCATAATGAAATACCGATTGGTCGATCTGAGATGTTTATTGTGCGAAGAGAGTTTCAATCACTTTAGCAAACTTATCGTCCACGTAAACAGTAGTCATCCTATGAAATTTCTCTCATGCGATGTATGCCATCAAAAGTTCAACAAGCGCAGAGACTTGACTGCCCACTTTAGATCTTACCATAAGAAAGAAGGCTACAATTGTGCTCGATGTGCAATCAGCTTTCCAACTAACTGGGCACTAAGCAATCACAAGTTCAAGTCACACTCTTCTGCTTGTAATATATGTTTTAAAAGTTTTTCATCTTCCGACAAACGTTTGAAGCACATGAAGTCAGAGCACATTAATGTAGATTTCATTCAGTGTGGATTTTGCTTTAAAACAATGAACACTAAACAGGGATTTCTAAGACATGCAGCTAGTTGCACGTCTAGGGCTAATGATTCCAAAATTCAGCATATCGCCGATGACGTTGTTTCTATAGATGATGGTGATAGAAAACCTAACGTCAAACAGATTAGAAATAATATTGCATGTATACTTAACATGTCAACAGCCATACCCTTTAAACATTTCATGAATAAATTTAGATGTTTTTATTGCACTAAACATTTCACAGAATGCGATGATCTCAAAGAGCACACCATCATAGAACATCCTCATTgtgatttaaagttcaagtcTATGAAGTTACGCAACAGAGAGGACACGTGTATCAAAATAGACACGTCGTCATTATCTTGTAAAATTTGTTTAGAAAATATTGTTGATTTGGATAACTTAATAAACCATCTCATCACTGAGCACAAGACACGATATGACAAATCTGTTAAAATCAATGTCCAACCTTATAAACTAATAAAAGATAATTTCGCTTGTCCTTTTTGCGGTGAAGTGTTTAGGTATTTTAGCACCTTACTGAGACACGTAAGTGGCTCTCACACTGACAACAAAACCATATGCATGTACTGTGGAACATCGTTCAGAACGAAACCCAATTTAAGAGCGCACATAGCCCGTCTTCACAAAGTAAGGAAGGTTTATAAATGTGGAACGTGTAAATTAGAGTTCACTAGGAAAAACGACTTATGCACCCACATGGGCAGAGTTCACGGCAATAAAATGATAGACTGTCCGGAATGTCCGGAGAAGTTCATATCTCAGTATTCTATGCAGAGGCACCTGATCGCCGTACACGCGTCCGGGCACAAATGCTCTTATTGTGGAAAATTGTTCACCAGGAACTCATTCATGGACAACCACATTAGACGAACGCACTTAAAAGAGAAAAACGTCCAGTGCTCGCTGTGCAACGACAGATTTTTTGATTCGGCGGTCCTTAAGTCGCACATGGTCAAGCATATAGGCGAGCGGAACTTTCATTGCGACGTTTGCGGAAAGAAATTTCTCTGGAAGAAAAACCTCCGCGGCCACATGGCATCCCACGTTAAAAACGCAAACGCCGAGAATCGTTTCTTTTCAGATGAATATTCGCACCGCCCGTACGACAGCTGTACCTCTCAGCGGAGGAGGAAAAATTTGCAAATATTGTTCAATAACACCTCAGTTATGCCTTTCAAATGGCGTGGCACGTACCTCTGTTTCTACTGCGGGAAAAACTATACAGAGTACCCAGAGTTCAGAAAACACACAAAGGGCCACGGGCTCTGCTCAACGAATGATTActctttgaaaataatcaaaggaAATCACATAGAAATTAAAATCGACGTCTCTGAAATCGCGTGCGAAATTTGTTATGAACCATTTAACAGATTCGACGAAATCGTTGaccatttgaatttgaaacacGACCTGCGATATGATTCTAGCATAGAAATTCCCTACCAACTATACAGATTGGTTGATTTCCGGTGTTTGCTATGCGACGAACAGTTTACGTACTTTGGGTATTTAGTGAAACACGTGAACAACATACACCCACAGAATTGCTTTATTTGCGACGATTGCGGACTCACGTTCAATAAGaaaagggatctcgctcttcacTCGCGAGATAACCATCGTCAGGGAGGGTACTCCTGCGACCAGTGCGCTGGTAACTTTAAAACTCGGGGTATGTTGCGGAAACACCAAAACACTTTCCATTTCAGAAAATGCAAAGACTGTGCCTTAACGTTTGCGTCTCACAGCCTCTTGCAAAAACATATCCAGTTAGACCATCCGGACGACGGTAGTTTGAAGTGTATCTATTGTTCTAAAGAGTTGCATTCAAAGCAGGGCTTAAAACAACATCTGAACAAATGCGAAGTGAAACTGCTCTCACAGATAGACGCACCTCGCGCTAACTCCTCGTTTCCAGAGGATTCCTACGTGGAACCCAAAAAGAAACAGAACATTTTGCAAATACGAGAAAATATCCAATGCGTGCTCAACATGTCCACCGCTATACCTTTCAAATTCTTCTCCAAATACTCGTGTTTCTATTGTTCTAAAAAGTTCATTGAATATGAAGATTTGAAAGAACATACGCTGAGAGAACACCTGGTTTGTGATGTTCAGTCTAAATGCATGAAGAAGTGCAAGGGTGAGAGGATAAGCGTCAAAGTAGACATCGCGAACCTAGCTTGCAAGGTGTGTTGCCAGCCTTTCGACGACTTGGACATTCTTGTAGATCACCTCATCGCCAATCATAAAGCTAACTACGACAAAACAATGAAACGATGCTTCGAACCTTTTCGGATAGTCAAGGACAACATACCTTGTCCTTTATGTACAGACCGCTCGTTTAGGTACTTTAGCACCCTCCTTAGGCACATAAACTCCGAACACAGTAACAATAATAGAATATGCGATTTTTGTGGACGTAGTTTTAAAAATGTAACAAATCTCAAAGTGCACATCACATACGCTCACACTGGCTCATGCGAGTGCGATGTATGCAGCCTGAAGTTCAAAAACCAATGGTGTTTAGCTCGACATAAAGCGAAAACTCACAACGCTAAAGACTACAAATGCCCCAAGTGTCCAGAACAATTCCAATCTCAATATCATAAACAGAAGCATCTGATTACGACGCACGATATCGGCCACAAATGTAGCTATTGCGGTAAAATGTTCACTAGGAACTCTTTTATGAAAGATCATATACGCAGGACGCATCTAAAGGAAAAGAACGTGCCTTGCTCCGTTTGTAATGAAAAATTCTTTGACAACTATCTCCTTCGCATGCATATGGTGAAGCACGAGGGAGAGAGGAAATTTAGTTGCGAAGTGTGCGGGAAAGCGTTTTTGCGACGCAGCAATCTTAGTTCCCACATGGACATGCATAAGAAATATGGCCATGTTCAGGTTTGA
Protein Sequence
MHMEQYKLEKLKCVHCEEKFLYPSFLVAHNQEDHPLRWWSCDECFVISNGMAGSHNHNHVVGQGKFSYDKPHKKACELTAARRRQNLQTLFRNSGVIPFEWRDIYSCTYCKRTGFQYDELVKHTKSHEKGLIKEFFANLRPKVLLKVDVSDLSCELCDESFQNLDALVDHLVTKHELKFYSKVPLDIEQFKLIDLSCPLCAENFSEMEILNVHVSNTHSTNNLQCELCSEMFSKKKDLKLHKKMLHADDYDFTRVKCSVKLESEINNYQLKIFDAAENKKIAKLRRDNIACILNTSTATPFKYYMNRFRCFYCAKNHTEFEPIRSHIVSKHPYCDPDYLKSIKGKDAIVKIDITSLACKLCNMAMNDLDALSHHLVSNHKIKYDKSMISIVQPFKISKDNMACPICPNVAFRYFVKLLEHMNESHSNNNVVCVYCGQTFRNTPSYRGHLARYHRSSACKCPDCDLEFPNIAKLTAHRANAHGMKSFKCSTCNEKFATVYLRQKHLIDAHGSGHKCSFCDRLFARNSYMKDHVRRLHLKEKNVECSVCKEKFFDKTRLNIHMVKHIGERNYHCDICGKTFLWKKNLRDEIGLKNVKSVNYRRRRNLQILLNNTSMIPFKWRQKYMCFYCGEDVEDYDMLRKHTRAHGTCSLTDRALKRVSGTDVEIKIDVSDTICEICDESLINFDELIDHLIHKHNLPYDNHTDLIIMKYRLVDLRCLLCEESFNHFSKLIVHVNSSHPMKFLSCDVCHQKFNKRRDLTAHFRSYHKKEGYNCARCAISFPTNWALSNHKFKSHSSACNICFKSFSSSDKRLKHMKSEHINVDFIQCGFCFKTMNTKQGFLRHAASCTSRANDSKIQHIADDVVSIDDGDRKPNVKQIRNNIACILNMSTAIPFKHFMNKFRCFYCTKHFTECDDLKEHTIIEHPHCDLKFKSMKLRNREDTCIKIDTSSLSCKICLENIVDLDNLINHLITEHKTRYDKSVKINVQPYKLIKDNFACPFCGEVFRYFSTLLRHVSGSHTDNKTICMYCGTSFRTKPNLRAHIARLHKVRKVYKCGTCKLEFTRKNDLCTHMGRVHGNKMIDCPECPEKFISQYSMQRHLIAVHASGHKCSYCGKLFTRNSFMDNHIRRTHLKEKNVQCSLCNDRFFDSAVLKSHMVKHIGERNFHCDVCGKKFLWKKNLRGHMASHVKNANAENRFFSDEYSHRPYDSCTSQRRRKNLQILFNNTSVMPFKWRGTYLCFYCGKNYTEYPEFRKHTKGHGLCSTNDYSLKIIKGNHIEIKIDVSEIACEICYEPFNRFDEIVDHLNLKHDLRYDSSIEIPYQLYRLVDFRCLLCDEQFTYFGYLVKHVNNIHPQNCFICDDCGLTFNKKRDLALHSRDNHRQGGYSCDQCAGNFKTRGMLRKHQNTFHFRKCKDCALTFASHSLLQKHIQLDHPDDGSLKCIYCSKELHSKQGLKQHLNKCEVKLLSQIDAPRANSSFPEDSYVEPKKKQNILQIRENIQCVLNMSTAIPFKFFSKYSCFYCSKKFIEYEDLKEHTLREHLVCDVQSKCMKKCKGERISVKVDIANLACKVCCQPFDDLDILVDHLIANHKANYDKTMKRCFEPFRIVKDNIPCPLCTDRSFRYFSTLLRHINSEHSNNNRICDFCGRSFKNVTNLKVHITYAHTGSCECDVCSLKFKNQWCLARHKAKTHNAKDYKCPKCPEQFQSQYHKQKHLITTHDIGHKCSYCGKMFTRNSFMKDHIRRTHLKEKNVPCSVCNEKFFDNYLLRMHMVKHEGERKFSCEVCGKAFLRRSNLSSHMDMHKKYGHVQV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01246111;
90% Identity
-
80% Identity
-