Acni008609.1
Basic Information
- Insect
- Aethes cnicana
- Gene Symbol
- MMP17
- Assembly
- GCA_963971205.1
- Location
- OZ020278.1:951380-990111[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.99 1.4e+04 -4.4 0.3 258 279 80 102 64 104 0.41 2 2 4.5e-23 6.3e-19 69.0 10.3 1 89 122 203 122 207 0.87
Sequence Information
- Coding Sequence
- ATGGGCCATCAATCCAAAAGTGCAACGCCTGACAATACTGACGAGGAGAGCGGAGACGCGTTCACTGACGCAGACTTCGGCGACTCCGAGGACGAGGCACACGTAGAACGCAGCGATGACTCTAACAATACCTCCCTCATCCCCCTCAATGAAACTGTTAACTCGGAGGTCATGGAGCTCGCTCACGGCGCGCGCAACGGTTTCGATCAAAACGATCATACTAAACTTAATGGACACAAAAACAGTGAAAGTGACGTGGACAGTCGCAATAACAGTGAGCACACGCTGACTGATCTCCGGCGGGACTCGCACGGCGACCAGAGCCCGTCCATCGTCGGCATTCTCGGCGGACAACAGGATCATGCAGAGCAACGTCTGGCGGcgaggcgcgcggcgcgggcggaGGCGCGCGATATACGCATGCGCGACTTGGAGCGCCAGCAGAGAGAGCAGGAAGAGCATGCTGACAAGGCCTACGACATGTACGCCGAGACGGTGAGCCGGCGCGGCGGGTCCCGGCTGACGGCGCTGAGCCCGGCGGTGCTGCTGTCCCCGCGGCGCGCGTCCGAAGACTCCGCCGATGACTCTTCCAGCGTCAAAGACCTGCGGGTAGCGTTTTTGAGGCGGTACGGCTACCTGCCGGATGCGGATTCGGGCGAGGACGCGGCGTACACGGCGCAGTCGCTGGCGGAGCCGCTCCGCCGGCTGCAGGCCTTCGCCGGCCTGCCGCCCACCGGCGCGCTCGACCGCGAGACCAAGCAGTTGTTCACAAAAAAGCGCTGTGGAATGAAAGATATCGAGGACACTCCAGCTAGGAAACGGCGATATGTCATCCAGCAGGGGTGGAATAAGAAGACCATTACGTACAGGGTGCTGAACGGGTCGAGCACGCTGTCGAAGGAGCGCGCGGAGTCTCTGATGGCGTCGGCGCTGGCGGTGTGGGCGCCGCACGTGGCGCTGCGCTTCGagcggcgcggcgccggcgaCGCCGACATCGAGCTGTCGTTCGCGCGCGGCGACCACGGCGACGGGTTCCCGTTCGACGGTCCGGGGCGCGTGGTCGCGCACGCGTTCTGCCCGCCGCACGGCGCGATGCACTTCGACGACGACGAGGCGTGGGGCGAGCTGGCCGACGAGGACGACGACGCGACGGACTTCTTCGCCGTCGCCGTGCACGAGCTCGGCCACGCGCTGGGGCTGGCGCACTCCGACGTGCGCTCCTCCGTCATGTTCCCCTACTACCAGGTGCCCGTGGAGAGGTTACACGCGGATGATATATTGGGACTGCAAGAGCTCTATACCAAGGAGCAGGCGGAGTCGGAGACCGAGAGCCCAGTGCTGGGCCGCTCGTCGCTGGGGCCCGACGACGACGACCCGCCCGACATCTGCTTCACCAACTACGACGCCATCCAGGTGCTGCAGGGCAAGATCCACGTCTTCGAGGAGGAGTGGATGTGGGTGCTGAGCCGGCGCAAGGCGGTGGATGCGGGCTCCCCGCGGCGCCTCCGCGACGTGTTCGTAGGGCTCCCGGCGGACATCACCGCCGTGCGAGCCATCTACGAGAAGATGAACGGGAACATTGTCGTATTCTCAGGCAAATACTACTGGGAGTTCGGGCCGAACTTCCGCCTCATCAAGCGCGGCCGTCTCTCGGACTACGGCCTCCCGCCGTCGCTGAGCGAGCTGTCCACGGCGTTCCTGTCCAACTACAACAACAAGACCTACCTCATCGACGACGAGCGCTTCTGGCGGTTCGATGAAGCAACCGGCTCCATGGACCACGGCTACCCTAAGGAAATGTCCGCCTGGAGAGACCTGCCGTACCCGATAGACTCCGCTATCATTTGGGAAGGCGACACGTACTTCTTCCGCGGGCCGCGCTACTGGCGGTTCGACAACGGCGCGGTGCGCGCGCACCCGTACTACCCGCTGCCCGTGGCGCCCATCTGGCTCGGCTGCGCGCCCGCGCCCGACGTGGCGCGCTACCTCGGCAACGAAGACTGA
- Protein Sequence
- MGHQSKSATPDNTDEESGDAFTDADFGDSEDEAHVERSDDSNNTSLIPLNETVNSEVMELAHGARNGFDQNDHTKLNGHKNSESDVDSRNNSEHTLTDLRRDSHGDQSPSIVGILGGQQDHAEQRLAARRAARAEARDIRMRDLERQQREQEEHADKAYDMYAETVSRRGGSRLTALSPAVLLSPRRASEDSADDSSSVKDLRVAFLRRYGYLPDADSGEDAAYTAQSLAEPLRRLQAFAGLPPTGALDRETKQLFTKKRCGMKDIEDTPARKRRYVIQQGWNKKTITYRVLNGSSTLSKERAESLMASALAVWAPHVALRFERRGAGDADIELSFARGDHGDGFPFDGPGRVVAHAFCPPHGAMHFDDDEAWGELADEDDDATDFFAVAVHELGHALGLAHSDVRSSVMFPYYQVPVERLHADDILGLQELYTKEQAESETESPVLGRSSLGPDDDDPPDICFTNYDAIQVLQGKIHVFEEEWMWVLSRRKAVDAGSPRRLRDVFVGLPADITAVRAIYEKMNGNIVVFSGKYYWEFGPNFRLIKRGRLSDYGLPPSLSELSTAFLSNYNNKTYLIDDERFWRFDEATGSMDHGYPKEMSAWRDLPYPIDSAIIWEGDTYFFRGPRYWRFDNGAVRAHPYYPLPVAPIWLGCAPAPDVARYLGNED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -