Ajac009790.1
Basic Information
- Insect
- Aenictocupidus jacobsonorum
- Gene Symbol
- Hr39
- Assembly
- GCA_010014765.1
- Location
- JAAAKC010000776.1:5179159-5181378[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.055 3.2e+02 0.4 1.6 45 157 204 260 125 314 0.47 2 4 2.6e-08 0.00015 21.2 0.0 1 24 399 422 399 426 0.91 3 4 0.5 2.9e+03 -2.7 0.0 95 113 476 494 466 505 0.76 4 4 2e-72 1.1e-68 232.5 0.0 206 408 542 739 514 739 0.96
Sequence Information
- Coding Sequence
- ATGGCGGCGGACATGCGCTCCCCGAACGTGTCCGTGACGCCCATCAACGTCGAGCCGCCGTTCGCGCCCGGCCATGGCGAGCCGCTGGACAGCTCCGATGCCGAGGTGGCGCAGATCGACTTTGAGAGCAGCGTCGTCAGCGTCGTCAGCATGCGCCACAGGGGgtcgcgcgacgcggcgagcgcggcggccgtggcggcggcagcagctgcgcctgcggcggcgccgcacgcgctcgagGACGCCGTTCCGCGGCCCATGTCCTGGGAGGGTGAGCTctccgacggcgacggcgacggcgacggagACGGCGGCGATGCTGGCATGTGCGTCGACGTCGAGCACGCGCCGGAGAATCTCTCGATGcagggcgggcgcgcgcacgccgccagccgcgcgcccgctccggCCGCCAGCGTCGTCGAGCGGGCCGTGGGGGGCGCGCAGGAGTCGCCCGTCATGCTGCTCAAGCGCCACCCGCCGAGCGGCCtgcccgacgccggcggccgctATTCGCTGCCGAAGGAGCTGGCGCACAAAGCGGCGCTGAACGTGCCGCCCACGCCCAGCCCCGACTCCGCCGTGCACTCGGCGTACTCGGTGTTCTCCTCGCCGACGCAGAGCCCGCTCACCCAGCGCCACGTCACGCTCACGCCGAGCCTCAGCCGCAACAAcagcgacgcgtcgcactCGAGCTGCTGCTCCTACAGCAGCGTCTCCGTGTCCGTGTCGCCCACGCAGCAGTTTTCGCCCACGCACAGCCCCATCCAGGGGCGGCACGCGCCCAGCGTGCACGGCTCGCCGCTGCACCACAGCGTGCTCTATCGCAGCCTGCAGGACGACTGCAGCACGCAGTTCACCGCCGGCTCGTCGGCGTCGGAGGGCGTCGACAACGACGACAGCCTCGCCAACGACGACAAGGCGCTGCTgcacgccgcgctgccggcgccgccgggcATCTCCCGGCAGCAGCTGATCAACAGCCCGTGCCCGATCTGCGGCGACAAGATCTCCGGCTTCCACTACGGCATCTTCAGCTGCGAGTCCTGCAAGGGCTTCTTCAAGCGCACCGTGCAGAACCGCAAGAACTACGTGtgcctgcgcggcgccgcctgcCCCGTCACGGTCGCCACGCGCAAGAAGTGCCCGGCGTGCCGCTTCGAGAAGTGCCTCCAGTGCGGCATGAAGCTGGAGGCCATCCGCGAGGAccgcacgcgcggcggccgctccaCCTACCAGTGCTCCtactcgctgccgccggcgctctcCAGCCACGGCCCGCCGccgggcggtggcggcggcggcggcggcggctccggcgCTGGCACCCCGGACGGctacgcgccgctcgccggcttTAGCGGCAAGGTGGAgccggcggaggcgccgccgccgccgccgccgcccgcggcgcacgccaagCGGCGGCACGCCGTCCCGCCGCTGCTGCAGGAGATCATGGACGTGGAGCACCTGTGGCACTACAGCGAGCTGGAGCTGGTGAAGctcggcgcggacggcggGTTGGGCCACGACGgctgcgccaccgccaccgccgccacgcacAACCTGCACATGCATCCGCTGCTCGCCGgcaccgcgctcgccggctcgGCCGACGCCAGCCCCGACTTCGTCGCGCACCTCTGCCGCATCGCCGACCACCGGCTCTACAAGATCGTCAAGTGGTGCAAGAGCCTGCCGCTCTTCAAGCACATCTCCATCGACGACCAGATCTGCCTGCTCATCAACTCCTGGTGCGAGCTGCTGCTCTTCTCCTGCTGCTTCCGCTCCATGCCGGCGCCGGGCGAGATCCGCGTCTCCATGGGCAAGAGCATCACgctggcgcaggcgcgcgaccTCGGCATGCACGCGTGCATCGAGCGCATGCTCAACTTCACCGACCAcctgcgccggctgcgcgtcGACCGCTACGAGTACGTCGCCATGAAGGTCATAGTATTACTCACCTCGGACACGTCCGAGCTGCGAGAGGCTGAGAgggtgcgcgcgtcgcaggaGAAGGCGCTCAAGGCACTGCAAGACTACACGCTCGCGCACTACCCCGACAGCCCCGCCAAGTTcggcgagctgctgctgcgcatCCCCGAGCTGCAGCGCACCTGCCAGGTGGGCAAGGAGATGCTGACAATCAAGTCCAAGCACGACGAGGGGCCAAGCTTTAATCTACTCATGGAACTCCTGCGCGGCGACCACTGA
- Protein Sequence
- MAADMRSPNVSVTPINVEPPFAPGHGEPLDSSDAEVAQIDFESSVVSVVSMRHRGSRDAASAAAVAAAAAAPAAAPHALEDAVPRPMSWEGELSDGDGDGDGDGGDAGMCVDVEHAPENLSMQGGRAHAASRAPAPAASVVERAVGGAQESPVMLLKRHPPSGLPDAGGRYSLPKELAHKAALNVPPTPSPDSAVHSAYSVFSSPTQSPLTQRHVTLTPSLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHAPSVHGSPLHHSVLYRSLQDDCSTQFTAGSSASEGVDNDDSLANDDKALLHAALPAPPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTVATRKKCPACRFEKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPALSSHGPPPGGGGGGGGGSGAGTPDGYAPLAGFSGKVEPAEAPPPPPPPAAHAKRRHAVPPLLQEIMDVEHLWHYSELELVKLGADGGLGHDGCATATAATHNLHMHPLLAGTALAGSADASPDFVAHLCRIADHRLYKIVKWCKSLPLFKHISIDDQICLLINSWCELLLFSCCFRSMPAPGEIRVSMGKSITLAQARDLGMHACIERMLNFTDHLRRLRVDRYEYVAMKVIVLLTSDTSELREAERVRASQEKALKALQDYTLAHYPDSPAKFGELLLRIPELQRTCQVGKEMLTIKSKHDEGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00022241;
- 90% Identity
- iTF_00022241;
- 80% Identity
- iTF_00022241;