Basic Information

Gene Symbol
dmd-4
Assembly
GCA_010014765.1
Location
JAAAKC010001871.1:2909-4354[-]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.1e-25 3.6e-21 74.7 10.8 1 47 12 58 12 58 0.98
2 2 0.017 99 2.9 1.0 29 37 310 318 308 323 0.79

Sequence Information

Coding Sequence
ATGTTATCGAGCTCCACAGCAGGACGATCGGCGCGGATACCAAAATGTGCGCGATGCCGCAATCACGGCATGATTTCCACCCTGAGAGGGCACAAGAAGCAGTGCGTGTACAAGAATTGTTCGTGCGCAAAGTGCGGACTGATCAAGGAGCGTCAACGCATCATGGCCGCTCAGGTGGCGCTAAAGCGACAGCAGGCGGCTGAAGATGCGATCGCGCTccatctggcggcggcggagagcggCACCACCTACGAGTACCTGCCGCCGGGGCGCATCTATGGCATGCAGGTGACGTCGCCGGAGGTCGAGCGCGACGCGGATgacgccaccgtcgccgcctacgccgcccccgccgcctccgccgcctccgccgcccccgccgcctccgctgctaCACCTCCGACGGCAAACCACGCATCGCACCAGGACGCACCGTCGGAGGAGTCAACCACCTCCGCCAccgcgagcgccgcccccAGCGTCAGTCCGCTCGCCGTCAGTCCGGCGTCCATCGACATGCTCACCACGCTCTTTCCGAACAAGAAGCGCTCGGTGCTGGAGCTCGTTCTCAAGCGATGCAATCACGACCTGCTGAAGGCGATCGAACACTTCAACGCGAGcgtgcagcgccgcgacgccgtcCTTGACCGACGGTcaccggcggcggttgcgtcgccgccgcccgtggcgacgctggcgccatctgtgatgCCCAAGGACAGCGGCAGCGCGTTCAAGACGGAGTCGGCGTTCCGGCCGGTCGGGCCGGCGGGGCCGCTGCCCAAGGGCAGCTGGCGCGGCCTGCATCCGAGCCCCATTTCGCTGATGGCCAGCAGCAAGGTGTTCATGCACAGTCTGTATCCGTTCCTGCCGCTGTTCAACTCGCAGCCGACGGTGCTGCCCAGCCCGGTGTACGTGCCCGGATTCTGCGAGTGCGAGCAGTGCAAGCACAATGTGTACCGAGTCGAGCCGCGGTTATAA
Protein Sequence
MLSSSTAGRSARIPKCARCRNHGMISTLRGHKKQCVYKNCSCAKCGLIKERQRIMAAQVALKRQQAAEDAIALHLAAAESGTTYEYLPPGRIYGMQVTSPEVERDADDATVAAYAAPAASAASAAPAASAATPPTANHASHQDAPSEESTTSATASAAPSVSPLAVSPASIDMLTTLFPNKKRSVLELVLKRCNHDLLKAIEHFNASVQRRDAVLDRRSPAAVASPPPVATLAPSVMPKDSGSAFKTESAFRPVGPAGPLPKGSWRGLHPSPISLMASSKVFMHSLYPFLPLFNSQPTVLPSPVYVPGFCECEQCKHNVYRVEPRL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-