Ajac012430.1
Basic Information
- Insect
- Aenictocupidus jacobsonorum
- Gene Symbol
- bab1
- Assembly
- GCA_010014765.1
- Location
- JAAAKC010000060.1:1119-9124[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.1e-13 5.3e-10 38.8 0.0 1 39 393 432 393 436 0.90 2 4 6.2e-13 1.5e-09 37.3 0.1 1 39 447 485 447 488 0.95 3 4 1.2e-19 3e-16 58.8 0.0 1 45 502 547 502 547 0.98 4 4 6.7e-17 1.7e-13 50.0 0.1 1 39 554 593 554 596 0.95
Sequence Information
- Coding Sequence
- ATGGCTGGTCAACACTACGTGCTGCGATGGAACAACTACCAGACGAACATGACATCGGTGTTCCACCAGCTGCTGCAGAACGAGGCGTTCGTCGACGTGACGCTGGCGTGCAACGACTTATCGCTGAAAGCGCACAAAGTGGTTTTGTCGGCGTGCTCGTCGTACTTTCAAAAGCTCCTTATGGAAAATCCCTGCAAGCACCCGACGATCATCATGCCGCAGGACGTGTGCTACGCCGATCTGAAATTCATCATCGAGTTCGTCTATAAGGGCGAGATTGACGTCTCGCAGGCGGAGCTGCAGTCGCTGCTGAAAACGGCGGACCAATTAAAAATCAAGGGGCTCTGCGACACGCCGGACGACCAGGTCTACATCGGcagcacgtcggcggcggccgtcagCGGTGAATACCCGAAGTTTCGACGCCTCGCCGCGTCGCCGAAGCATCGGCCCGAGCACGGCGACCCGGGCAAGAAGGCCAAGTGCAAGAAGGGCGACAAgccgcccgccgtcgccgctgccaccgTCGCACACCGGGAGCCAGATGCTGGCGCCTTCACGCcggccgccaccagcgcaaCTACCAGCGAGGATGTGCTGCACCAGCACCTGCATGCCGATCACACCAAAGAGGATGACAGCGCATTGACTGCGAGAGATGACGATAGGGGAAGGAAGCGACTGAACGCGGAACCGAACCTCCTGAACATGAGCAGCAATGCTCTGCTGACTGGTCAATTGCTATTTTCGCAATTTGGAGTGGACAATGAGGACTTTTCGCCCGACCCACCCGCGCCGATGGCCATCCCCGTCGGCCACGTCGAAATGCAGGAGCATTCGCCGACGAGAACGCTGCTGACGAACTCGTCCTTGCATCGCACGGATTTGTCCAGTCCGCACATGAAGCTCCCCTCCGACATCAAGCGCGAGATCAAATTCGAAACGCTGCACTCGTCCTACACGTCTGAATCGCTGCTGGACATCGACAGCCACATGTCGGCGCACTCAATGGATAGCCACGACGGCCAGGACCCAAGCAGCCACACGACGATGATGATCACGCCGGAGCTGACGAGCCTCATGCCGCTGGGCGCGATCAGCGAGCACAGCGCCAAGTCGAACGGGCACTCGGAGCACTCGCACAGCTCGCGGCACGGCGGCGGGCCCAAGACGTGGACGCAGGAGGACATGGAGCGTGCGTTGGACGCCCTCCGGAATCACAATATGAGTTTGACGAAGGCATCGTCCACCTACGGCATTCCATCCACCACGctctggcagcgcgcgcaccgcctcgGCATCGACACACCAAAGAAGGAGGGGCCGACCAAGTCCTGGACGGAGGAGAGCCTCAACTGCGCGCTGGAGGCGCTGCGCACGGGCACGATATCTGCGAACAAGGCGAGCAAGGCGTACGGGATACCATCGAGCACGCTCTACAagatcgcgcggcgcgagggcATCCGCCTGGCGGCGCCGTTCaacgcggcgccgacgacgtgGACGCCAGACGACCTGGAGAAGGCACTTGAGTCGATACGCTCCGGGCAGACGTCGGTGCAGCGCGCCAGCACCGAGTACGGCATACCGACGGGCACGCTCTACGGTAGGTGCAAGCGCGAGGGCATCGAGCTGTCGCGCTCGAATCCGACGCCGTGGTCGGAGGACGCGATGGGCGAGGCACTCGAGGCGGTGCGCCTCGGGCACATGTCCATCAATCAGGCCGCCATCCATTACAACCTGCCGTACTCATCGCTGTACGGCCGCTTCAAGCGCGGCGCCAAGTACGACTCGGATTCGGTGGACCTCAACGTCGACGCGCACTCGCAGCACGAGGGCCCGCCGATGATGCTCGACTACGCGAACTCGCATAATTCCCAAGTACAATATCACAATCATACAAATAGCTGA
- Protein Sequence
- MAGQHYVLRWNNYQTNMTSVFHQLLQNEAFVDVTLACNDLSLKAHKVVLSACSSYFQKLLMENPCKHPTIIMPQDVCYADLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCDTPDDQVYIGSTSAAAVSGEYPKFRRLAASPKHRPEHGDPGKKAKCKKGDKPPAVAAATVAHREPDAGAFTPAATSATTSEDVLHQHLHADHTKEDDSALTARDDDRGRKRLNAEPNLLNMSSNALLTGQLLFSQFGVDNEDFSPDPPAPMAIPVGHVEMQEHSPTRTLLTNSSLHRTDLSSPHMKLPSDIKREIKFETLHSSYTSESLLDIDSHMSAHSMDSHDGQDPSSHTTMMITPELTSLMPLGAISEHSAKSNGHSEHSHSSRHGGGPKTWTQEDMERALDALRNHNMSLTKASSTYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEESLNCALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPDDLEKALESIRSGQTSVQRASTEYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGAKYDSDSVDLNVDAHSQHEGPPMMLDYANSHNSQVQYHNHTNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00902152;
- 90% Identity
- iTF_00022272;
- 80% Identity
- iTF_00022272;