Ajac010631.1
Basic Information
- Insect
- Aenictocupidus jacobsonorum
- Gene Symbol
- retn_1
- Assembly
- GCA_010014765.1
- Location
- JAAAKC010000776.1:11651868-11657279[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-20 4e-17 62.4 0.0 15 89 4 76 1 76 0.94
Sequence Information
- Coding Sequence
- ATGGATAAGACGGAAGGTACGCCCATCAACAGACTGCCCATCATGGCGAAATCAGTATTAGATCTCTACGAATTGTACAATTTGGtgatcgcgcgcggcggattgGTGGACGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCCTGCACTTACCATCCTCCATCACGTCGGCGGCATTTACGCTACGCACACAgtacatgaaatatttatatccCTACGAGTGCGAGAAGCGCCGCCTGAGCACGCCCGCCGAACTGCAGGCCGCCATCGACGGCAACCGGCGCGAGGGGCGCCGCAGCAGCTACGGGCAGTACGAGTCCGTGCAGCGATCGCCGAACCCGTCGCAGATGTCGCCGCTCTCGCTGGtctcgcagcagcagcagcacctggcggcgcgcatgaacTCGGTGATGAGCGGCGGCATCTCGCTGCACAATGGCGCCCACCATCCCAGCCATCCGGCGCCGCTGGGCCAGCCGCTGAACGCGGGCCCGCTGCCGGGCCTCGCGCCCAGCGAGTTCGAGGCGCGCATGATGGAGTACGTCAAGCTGCTCAACAAGGAGATCCGCAGCTCGGCGTCGACGCCGCCCAGGCAGGGCGACCTCTCGCCGCCGGGCGCCACCTCGCCGCTGAATCCGGTCGAGATGTCGCGGATGACGCTCTGGAACTTGTACAACAACAATCAGCCGCCGCTGGAGCCGCAGAAGGAGGCTCTCAACCTCTCggacgcgtcgccgccgatggTGAAGCGCGAGCCGGAGCAGCGggagtcgccgccgccggcgaaaaagTTCATCAAGGATGACAGCGACCATCACGCGAAGATGCTGGCGCCGAGtacaaatatcaaaattaatagTCGAGGAGATGCACGCAATGGTGACAATTCGTTAGTGGTGAGTATGGAACTCAACGGCGTCACATACCAGGGAGTGCTTTTCGCGCAGGCCACCTCGACACAGAATAACGCGAGCGCGGGCCGGACGCTGATGGCATCGTAA
- Protein Sequence
- MDKTEGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGQYESVQRSPNPSQMSPLSLVSQQQQHLAARMNSVMSGGISLHNGAHHPSHPAPLGQPLNAGPLPGLAPSEFEARMMEYVKLLNKEIRSSASTPPRQGDLSPPGATSPLNPVEMSRMTLWNLYNNNQPPLEPQKEALNLSDASPPMVKREPEQRESPPPAKKFIKDDSDHHAKMLAPSTNIKINSRGDARNGDNSLVVSMELNGVTYQGVLFAQATSTQNNASAGRTLMAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480641;
- 90% Identity
- iTF_00631925;
- 80% Identity
- -