Ahon002037.1
Basic Information
- Insect
- Adoxophyes honmai
- Gene Symbol
- -
- Assembly
- GCA_005406045.1
- Location
- BHDV01044008.1:149122-153488[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.0012 0.066 13.9 6.0 1 23 165 188 165 188 0.97 2 17 0.0003 0.017 15.7 0.9 1 23 197 220 197 220 0.96 3 17 0.019 1.1 10.1 0.8 2 23 233 255 233 255 0.97 4 17 0.0012 0.068 13.9 1.2 1 23 264 287 264 287 0.97 5 17 0.00016 0.0093 16.6 1.4 1 23 299 322 299 322 0.96 6 17 0.00045 0.025 15.2 1.0 3 23 352 373 351 373 0.98 7 17 0.0019 0.11 13.2 0.9 2 23 383 405 382 405 0.96 8 17 0.049 2.8 8.8 1.0 3 19 411 427 410 430 0.93 9 17 0.0042 0.24 12.1 0.4 2 21 435 454 435 457 0.94 10 17 0.027 1.5 9.6 1.3 3 23 467 488 466 488 0.95 11 17 0.0052 0.29 11.8 3.7 1 23 493 516 493 516 0.94 12 17 0.0022 0.13 13.0 0.9 2 23 527 549 526 549 0.95 13 17 0.46 26 5.7 2.5 1 23 574 597 574 598 0.93 14 17 2.1 1.2e+02 3.7 0.2 2 23 604 625 603 625 0.80 15 17 0.057 3.2 8.6 1.5 3 23 633 653 631 653 0.97 16 17 0.021 1.2 9.9 0.1 1 23 719 741 719 741 0.96 17 17 0.79 45 5.0 3.1 1 23 747 770 747 770 0.96
Sequence Information
- Coding Sequence
- ATGATGTcaataaagaaagaaaatgtaaaaatcaaattagaagatttaaaaatagagccagatgaaataaaaatagaatatgAGGAACGAAAGGACCCAACCTCTTTTCTCCCAGAGGAGCCAATGGTGTATGAattaaaaaagaagaaaaagaaaaaaaagaagcaTAGACAAGAGGACCCGTTTAAGGACATTGAGGAAAAAACACCAGTTCAAGTGATCAAAGCCTATGAACCAGCTGACGATTGTCCAAGTCTTGATCCAGAAGTTACAATTAAAGTGGAAAATATAGAAGTGGAATTGGATTTTAacgatTTTGCTGAAAATGGCGGACTTATGCTCGAAGGCCCTCATAGTGAGGACAGCCAGGAACCAGAAGTCAAAATAGAACCACAGAATCACGAGGCTGTCATACTCACCTTTGAGAGTGTTGTCAGTGACAAATCTGTCATAGGCTACAGCCAAGACCAACCAGTTCAAGCCGCACCCAACCACGTCTGCAAAATATGCCATCTCGTCTTCCAGACTCAGAAAACGCTCCGAATGCATCAGAAACGCAAGCACCCCGTATACAGGAAGAGTTTCAAGCACATCTGCGATTACTGTGGCATGTCTTACGAAATGAAGAACAGTCTAGTTGCTCACATAAAAAGGAAACATGGACCTAATTCGTCTACGGATGACGGAGAGGAGAGAACGTGTGATATATGCGCACTGGTCTTCAAAGGAATGACGAGGTTAAGGATGCATATGCGGAGAAAGCATGGGCTTTTTGAAGAATCCTTCCAGCATGAGTGTGAACAGTGTGGGCTTACGTACGACAAGTATAGAAGTCTGATTGTCCATATACAAAGGAAGCATACCACCGTTACCAAGCCCGTTCCGAACCAATGGTTCAACTGCCCGTTTTGCCCAAAAATCTTCACTAAACGCGAAACATACGCCAGACATGTGCAAAGAAAGCACAGAATAAATGAAGATGGTGTGGAGGAAGACAACATCACTCAAGAAGCTCTGGAGAGCTGCGTCAACAAAGACACTGGAGAGATATTGTGTAAGGAATGTCCATTAGTGTTTTCGTCAATGAATTTCTTAAAATTGCACATGAGGAGAAAGCATAATGCGTTGAAGGAGGACTTCAGATTAAAATGCATGATTTGTAACCTGTCGTACGACAAAATTGAGAGTCTGAAGCGTCATGTGCGAAGAAAACATGACAATGGAGCTCACTGTGAAGTGTGTAACAAGCAATTTGCTACCAGAGAGTTGTATTTAAACCATTCCCATATAAAAATGATACGGGAATGCACTATTTGCGGTCTAATATTTGCGTCCCAAGCCGGCCTTGGTAAACACTTACGTTGTACCCACAAAATAGACACGCCTAAGActgttttttgtaacatttgtaaTGAAGGTTTCCATGACAAACGCCAGTTGAAACCCCATTTGTTGAGAGTGCATTTAAAAGTATCGTACACATGCAGGTTTTGCTTTAAAGTCTTTAAAGCTAAAGAGAGTTACCGGCGACATATTCTATTCAAACATCCAACACAGAATCAAACCACCAATGAACAGAAATGTGAGCAGTGCACAGAAACTTTTCCGGATGAATTTGAACTCAGTCGACATGTTCATTCAGCTCATCCTAAAAAACTAATAGAAGCTGACATTCCCTTGGTACAAATAAAGAAAGAAGACGGTGACATAAAGGAGGTATTCCAATGCACAAAGTGTCCGGAGAATTACCTCACATTTGAGCAGCTTAGGTTGCATTACGAGCAAAACCATCACAACATTCACGACACTCAGTGTCAGATTTGCGGCCAAATCTTGCCAACAAGCGAGCTACCAAAACATATGAAGCAGGAACACACACCTGATACCGTCATGAATTGTAAATACTGTGAGTTTAAAACTACAATCAAAGCCAGTATGACACAGCATATGTTGCGGCATAAAAATGCGTCCACTTTGCACTGTGAGTACCCAGGCTGTAGGTTCAAGTCTTTCTACGAAGATGCGATGaccaaacacaaaaagaaacatGTGGATCAAGGAGTGAAGCTTCAGTGCACTCGGTGTCCCTTCCAGACTATGAATAAGTACATTTTGAGGTACCATGAGGAAGCACATGAAACCGGGAAGAAAAGGTATGCCTGTAACCAGTGCGACTATGCTACTATATTACCTGCTAACCTAGTGCAACACAAGTACAAGCATTCGGCAGAGAAGAGGTTCAAATGCGAATTCTGCCCGTTTGCCACAAAGTATAATACGTCGTTACGTTTCCACGTCAAAAAGAAACACTGTGATCTCCCCTCGTTCAGTTAA
- Protein Sequence
- MMSIKKENVKIKLEDLKIEPDEIKIEYEERKDPTSFLPEEPMVYELKKKKKKKKKHRQEDPFKDIEEKTPVQVIKAYEPADDCPSLDPEVTIKVENIEVELDFNDFAENGGLMLEGPHSEDSQEPEVKIEPQNHEAVILTFESVVSDKSVIGYSQDQPVQAAPNHVCKICHLVFQTQKTLRMHQKRKHPVYRKSFKHICDYCGMSYEMKNSLVAHIKRKHGPNSSTDDGEERTCDICALVFKGMTRLRMHMRRKHGLFEESFQHECEQCGLTYDKYRSLIVHIQRKHTTVTKPVPNQWFNCPFCPKIFTKRETYARHVQRKHRINEDGVEEDNITQEALESCVNKDTGEILCKECPLVFSSMNFLKLHMRRKHNALKEDFRLKCMICNLSYDKIESLKRHVRRKHDNGAHCEVCNKQFATRELYLNHSHIKMIRECTICGLIFASQAGLGKHLRCTHKIDTPKTVFCNICNEGFHDKRQLKPHLLRVHLKVSYTCRFCFKVFKAKESYRRHILFKHPTQNQTTNEQKCEQCTETFPDEFELSRHVHSAHPKKLIEADIPLVQIKKEDGDIKEVFQCTKCPENYLTFEQLRLHYEQNHHNIHDTQCQICGQILPTSELPKHMKQEHTPDTVMNCKYCEFKTTIKASMTQHMLRHKNASTLHCEYPGCRFKSFYEDAMTKHKKKHVDQGVKLQCTRCPFQTMNKYILRYHEEAHETGKKRYACNQCDYATILPANLVQHKYKHSAEKRFKCEFCPFATKYNTSLRFHVKKKHCDLPSFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00871612;
- 90% Identity
- iTF_00342554;
- 80% Identity
- -