Basic Information

Insect: Adoxophyes honmai
Gene Symbol: -
Assembly: GCA_005406045.1
Location: BHDV01072452.1:236605-261239[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0014 0.08 13.6 6.1 1 23 177 199 177 199 0.99

2 11 1.2e-05 0.00068 20.1 0.7 1 23 205 227 205 227 0.99

3 11 6.9e-05 0.0039 17.7 1.6 1 23 233 256 233 256 0.96

4 11 0.035 2 9.2 3.2 1 21 262 282 262 284 0.95

5 11 3.5e-05 0.002 18.7 0.8 1 23 290 312 290 312 0.99

6 11 7.9e-05 0.0045 17.6 3.3 1 23 318 340 318 340 0.98

7 11 0.00066 0.038 14.7 1.1 1 23 348 371 348 371 0.98

8 11 0.012 0.67 10.7 4.9 2 23 378 399 377 399 0.96

9 11 0.001 0.058 14.1 2.1 1 23 405 427 405 427 0.98

10 11 1.6e-06 9.2e-05 22.9 1.9 1 23 433 456 433 456 0.96

11 11 1.1e-05 0.00062 20.3 3.8 1 23 470 492 470 492 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0014	0.08	13.6	6.1	1	23	177	199	177	199	0.99
2	11	1.2e-05	0.00068	20.1	0.7	1	23	205	227	205	227	0.99
3	11	6.9e-05	0.0039	17.7	1.6	1	23	233	256	233	256	0.96
4	11	0.035	2	9.2	3.2	1	21	262	282	262	284	0.95
5	11	3.5e-05	0.002	18.7	0.8	1	23	290	312	290	312	0.99
6	11	7.9e-05	0.0045	17.6	3.3	1	23	318	340	318	340	0.98
7	11	0.00066	0.038	14.7	1.1	1	23	348	371	348	371	0.98
8	11	0.012	0.67	10.7	4.9	2	23	378	399	377	399	0.96
9	11	0.001	0.058	14.1	2.1	1	23	405	427	405	427	0.98
10	11	1.6e-06	9.2e-05	22.9	1.9	1	23	433	456	433	456	0.96
11	11	1.1e-05	0.00062	20.3	3.8	1	23	470	492	470	492	0.95

Sequence Information

Coding Sequence: ATGCCGCCTCCTGATAAGAAGGAGGTGGGTGTCCAGGAGGGAAAGCTTATCCAGTCATATCTAAATGCGTATAATCAGCAGGAGACGGAAACTGAAGCTACTGTTTTAGtaAACAGCGGCGAAGAAGAAGAAAATCCCAATGGAGTCACATATTTTGTGGATGAGCAGGGCAGGTATTACTACCAGCCCGGTCAGAACCAGACCATAATGTCTCTCGCTAACCCGGAAGAGAGTGAGGAGGCAATAGCAGAAGAAGATACCACAATGATTGAGGAGGGCTATCAGACGGTCACTCTGGTGCCTTCCGACACGGGCACGGGGGAAGTTAGCTATGTGCTGGTTGTGCAGGAAGAAAGTAAGCCAGTCATCAATGTGGACATCAAAATTGATCAGGAGGAGGAAGAAGAAGACAAAGGCAATGAGGATGTCTACAATTTTGAGGAGGAGGGCATCGAGGAGGTGTCCGACGAGGACGATGACGCTGCAAAGCGCAAGAAAACACCTAAAAAGAGGAACCAGCGCTCCAAGTTCACCTGCTCCTTCTGTAACTACACCAGCCACAGACGTTACCTTCTACTGAGGCACATGAAGACTCACTCTGAGGACCGGCCGTACAAGTGCAAGGTCTGCGAGCGGGGCTTCAAGACCATGGCATCGCTGCAGAACCACGTGAACATGCACAACGGGGTCAAACCGCACGTCTGCAAGTACTGCAACAGCCCGTTCACAACCTCTGGCGAGCTGGTCCGGCACGTACGGTACCGCCACACCCACGAGAAGCCGCACAAGTGCTCCGAGTGCGACTACGCCTCCGTCGAGCTGTCCAAACTGCGCCGGCACGTCCGCTGCCACACCGGGGAGCGGCCCTACCAGTGTCCGGACTGCACGTACGCCTCGCCGGACACGTTCAAGCTGAAGCGGCACCTCCGGACGCACACGGGCGAGAAGCCGTACAAGTGCGACAGTTGCAACATGTGCTTCACCCAGTCCAACTCGCTGAAGGCGCACAAGCTCATACACAACGTTGCCGAGAAGCCCGTGTACCGCTGCGAGCTCTGCCCGGCCAAGTGCGGGCGCAAGACCGACCTGCGCATACACATACAGAAGCTGCACACGTCGGACACGCCGCTCAAGTGCAAGCGGTGCGGCAAGTCCTTCCCCGACCGGTACTCCTGCAAGCTGCACAACAAGACCCACGAGGGCGAGAAGTGCTTCAAGTGCGACCTCTGCCCGTACGCGTCGACCATGCTGCGGCACCTCAAGTCGCACATGCTCAAGCATACAGACGAGAAGCCCTTCGTCTGCACAGAGTGCGACCAGAGCTTCCGTCAGAAACAGCTGTTGCGCCGTCATCAGAACCTCTACCACAATCCGGACTACGTGCCGAAGCCGCCCAAAGAGAAGACGCACGCCTGCCACGAGTGCAAGCGCACATTCGCGCACAAGGGCAACCTGATCCGGCACCTGGCCATCCACGACCCGGAGTCGGGCCACTCGGAGCGCGCGCTCGCGCTCAAGATCGGCCGCCAGCGGAAGATCAAGTACATGACCTCTAGGAGTCAGGAGGAGCCAAACGAATCCGACGACGCCGGCATGGTTAAGCTAGGCCTCACCAACAACGAGCTGCGTCGCGGCGAACTGGTGACCGTGGCGGACGGCGACGGCCAGCAGTACGTCGTGCTAGAGGTCATCCAGTTGGAGGACGGCACGGAACAGCACGTGGCCGTCGTCGCCCCGGACTATATGGAGTGCGAGGACGAGAACGAAGAGGAAGAGGAGGAAGAGgtcgcggcgccggcgccgcctcgCGCCAAGGACACAGTCCTCGAGAAGAGCATCAAGCTAGAGAAGGACGTCAACACCTGCTTCGGCTTCGACGAAGAGGAAGAGGGCGACAACGACGAAGAGTACGAATTGCTGGAGGCACGCACTTAG
Protein Sequence: MPPPDKKEVGVQEGKLIQSYLNAYNQQETETEATVLVNSGEEEENPNGVTYFVDEQGRYYYQPGQNQTIMSLANPEESEEAIAEEDTTMIEEGYQTVTLVPSDTGTGEVSYVLVVQEESKPVINVDIKIDQEEEEEDKGNEDVYNFEEEGIEEVSDEDDDAAKRKKTPKKRNQRSKFTCSFCNYTSHRRYLLLRHMKTHSEDRPYKCKVCERGFKTMASLQNHVNMHNGVKPHVCKYCNSPFTTSGELVRHVRYRHTHEKPHKCSECDYASVELSKLRRHVRCHTGERPYQCPDCTYASPDTFKLKRHLRTHTGEKPYKCDSCNMCFTQSNSLKAHKLIHNVAEKPVYRCELCPAKCGRKTDLRIHIQKLHTSDTPLKCKRCGKSFPDRYSCKLHNKTHEGEKCFKCDLCPYASTMLRHLKSHMLKHTDEKPFVCTECDQSFRQKQLLRRHQNLYHNPDYVPKPPKEKTHACHECKRTFAHKGNLIRHLAIHDPESGHSERALALKIGRQRKIKYMTSRSQEEPNESDDAGMVKLGLTNNELRRGELVTVADGDGQQYVVLEVIQLEDGTEQHVAVVAPDYMECEDENEEEEEEEVAAPAPPRAKDTVLEKSIKLEKDVNTCFGFDEEEEGDNDEEYELLEART

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00654560;
90% Identity: iTF_00156512;
80% Identity: -