Basic Information

Gene Symbol
-
Assembly
GCA_005406045.1
Location
BHDV01016133.1:210194-213587[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.0074 19 5.9 0.0 53 86 118 150 110 151 0.85
2 4 0.0018 4.6 7.9 0.1 45 86 205 244 184 245 0.77
3 4 0.24 6.2e+02 1.1 0.0 49 81 300 331 282 334 0.77
4 4 0.0029 7.4 7.2 0.0 51 83 402 433 377 436 0.87

Sequence Information

Coding Sequence
ATGGATGCAAATACACATAACCAAAACCAGAGTTACTGGTTTGTATTTAGAGAAGACCAAAGTAATGTTATATTTAGCAGCAACAACTTCACAATACAGAACCCAACACAAGtaactGCACAAGAGGCTCGATACATAATGGACTCAGGCACAGGCGACAGCAGACAATACATCCAAATAAATGAAGTGCCTGCAGCCGTCCCGCAAGAGCCTCCTGAGCCCCCACCCTGCGTCAAGGAGGAGGAGAAACAGAAGGAGGAAGATGCTTTTTGGGATTGGAATAAAATCCGGCTGCTCCTCACTTTATGCTTGGAGTACAAACTCAGAATCAATGTTGGCCCCAGAGATAGGGCTCTTTGGAACGATATTGCAGCCTCTGTGGGCACCACTCCAGAGGAGTGCAATAAGAAATACAGGAACCTCAGAAGGACCTACATCAGATTgctgaagaaaaaaaagatgGGGAGGAACATCAAGTGGGTACACTTTAATCTTTGTGATGAAATCCACAAGGAATATAAAAGCCTGCACCCTGTATTGATTGAACCTTGGGAGGACATTAAGATAAAAAGGCTCCTTAGTCTGTACATAGAAAATATCCATAGATTCCGTAATTCTGATTGTCTTCAAAAGGACATTTGGAAGGACATAGCCTCCCAGTTGGGTTCTACTGAATATAGCTGCTATCACAAATTCAAGAACTTAAAAAGGACTTACATGACCTGGTTAGAGCGCAGTCGAGAAACCGGCCAGCTCATCAAGAAATGGCCATATCAGCATTATTTTGAAAGAATATTTTACAATTACAATCCCATACTGGGACCATGGGACAGTTTCAAGACCAAGCAGTTGTTGAATGCGTATGCTCAGCACAGCCACAAGTTCAGAAACCCCAAGTTCCAAAAAAAAGAGCTGTGGAAAGAAATATCTTCACTGGTGGGAGAGAGTCCAAATGATTGTGATAGGAAATTCAGAAACTTGAAGCAGACCTATATCGTTATAAAGAGTAAAGTAGGCTCTGCTAGGCGCAATACAAAGTGGTGCTACTTTGATGATTTTGAAGCAATTTACAATAATGCTGCAAGCTCCAGTGGCAACAACGGAGGAAACCAACTCAGCCTCACTGCTCAAGAGGATTACATTAAAGAATTGCTTCAGTTTTACTTAGACCATAAGGACAAATTTAAAGACCCTctgactaagaaaaaaaatgtgtggaaAATTATCAGTTCAAAGTTAGGATTGTCTCCTGAAGATTGTGATAGGAAATTcagaaatttaaagcaaactTACAACAGACTAGCAGATAGGAAAAAAGAATCAGGACAAGACATCAAATGGCCATACTTTACATATTTTGAGAAAATCTATGAGGATTCACCGCTTCATACGCCAAATAAACATAGTGATAATGTTGATGACACTAGTATATCTGAAATCAGAGTCATGCAAGATGTTCAGGAAAGGAAGGACAGTGATCAGAAATTTGACAAGCTGCTCCGTTTAGTAGAAGAGTCCAATAATATACAAAGGGAGAGAAATAGGATTCTTGAGGCTTTGATCAATCAAAACTGA
Protein Sequence
MDANTHNQNQSYWFVFREDQSNVIFSSNNFTIQNPTQVTAQEARYIMDSGTGDSRQYIQINEVPAAVPQEPPEPPPCVKEEEKQKEEDAFWDWNKIRLLLTLCLEYKLRINVGPRDRALWNDIAASVGTTPEECNKKYRNLRRTYIRLLKKKKMGRNIKWVHFNLCDEIHKEYKSLHPVLIEPWEDIKIKRLLSLYIENIHRFRNSDCLQKDIWKDIASQLGSTEYSCYHKFKNLKRTYMTWLERSRETGQLIKKWPYQHYFERIFYNYNPILGPWDSFKTKQLLNAYAQHSHKFRNPKFQKKELWKEISSLVGESPNDCDRKFRNLKQTYIVIKSKVGSARRNTKWCYFDDFEAIYNNAASSSGNNGGNQLSLTAQEDYIKELLQFYLDHKDKFKDPLTKKKNVWKIISSKLGLSPEDCDRKFRNLKQTYNRLADRKKESGQDIKWPYFTYFEKIYEDSPLHTPNKHSDNVDDTSISEIRVMQDVQERKDSDQKFDKLLRLVEESNNIQRERNRILEALINQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00325157;
90% Identity
-
80% Identity
-