Adec019294.1
Basic Information
- Insect
- Adalia decempunctata
- Gene Symbol
- -
- Assembly
- GCA_951802165.1
- Location
- OX637698.1:36611620-36615921[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0028 0.37 12.5 1.0 1 22 228 249 228 252 0.89 2 14 2.3 3e+02 3.4 4.4 3 19 257 273 256 275 0.96 3 14 0.013 1.7 10.4 4.6 1 23 285 307 285 307 0.98 4 14 0.06 8 8.3 0.1 3 21 325 343 325 344 0.96 5 14 0.0094 1.3 10.9 2.0 2 23 351 372 350 372 0.96 6 14 1.7e-05 0.0022 19.5 0.6 1 23 378 400 378 400 0.98 7 14 0.76 1e+02 4.9 0.1 1 23 407 429 407 429 0.94 8 14 3.1e-05 0.0041 18.7 3.4 1 23 438 461 438 461 0.95 9 14 0.0039 0.51 12.1 1.1 1 23 474 497 474 497 0.97 10 14 1.3e-05 0.0017 19.9 0.7 1 23 504 526 504 526 0.98 11 14 2e-06 0.00027 22.4 0.3 1 23 532 554 532 554 0.97 12 14 1.1e-05 0.0015 20.1 5.9 1 23 560 583 560 583 0.97 13 14 1.4e-06 0.00019 22.9 1.4 1 23 589 611 589 611 0.99 14 14 5.2e-05 0.007 18.0 1.0 1 23 618 640 618 640 0.98
Sequence Information
- Coding Sequence
- ATGTTGGCTTTCCTTTGTTGCAATGATAATTTCTTGAAGACATCTTCCAACACTAGGGTGAATAATTTTGGCGAAATCGAGTCACCCTGTCTAACTCCTGTCTGTATTGGGATCATACCCGTTGTTGAGATTTCATTTGTTGATTACAAGAAAGCATTTGATTCCGTGGAAACATGGGCGGTGATAGAGGCAATGAACAACGCAAGAATCGACTCGAGATATACAAACCTCATTGAGGACATCTACCAAGATGCTACGCTCCAGTTTAGTATGcAGATTCCAGTCCTTGGTCACGTGAAAGTGGAAATTGAAAACCAAGATGAGGAATACTTGAGTCAGATGGTACATGATCAGGGTAGCATGAACAGCACAGGTATGGAAGTTAAATACATAAAACAGAATGGAGATGGAGAAGAACAAGAGATTTGGCTCCAAGATGATAACGAAGGAGAAGAGGAAGATCTAGAGCCCACCCAGTCGGTTGAAAATTATGAGGATATGAACAATATTCTGCAATCTGTCAAAGTCTTAAATCCTTTTCATTTTGCTGATGGCACTGCATATGTTCAAGGAGATGCCCAAGAAGTTGATGGTGAAGGATACCAAACAATTGAATTCATCGATGGAGACGGGAATTATATGCAGGGTaCTGTTGCTGATACtaaacaaagggaaaaaatccatGTCTGTCGCATATGCAATGAAGGATTTCACACATCCAGGGACTTGAATAATCATGCTCAAATAGAGGACCATCCTCAAAGATGTTGTAATACGTGCTTTGAACCATTCCATACCTATTCAGCTTTGATAAAGCACTGCATGGATAACCAGCATGCTCGCCCTCCTATGTTCAAATGTCCTTATTGCTTCAAGAAATGTGACAACAAGCAAATCTTGCAATCTCACATTAAAAATCACGTGAAGACCAATAATATCAAGGTGACAAAGGATAAAAAAGGCAATTTGGGATGCCagGTATGCAGAACTGCTTTTGTAAGTGTTGCTGATTTGAAACAGCATTACAAAGAAAACAAAGAGAGCCATTTGACATGCCACATTTGCcttgaaaaattcaacaataTATCAAAACTCGATTCACATCTAAAACAACATGATGCTGAGAAACCATTTGTGTGTCAAGTATGTGGCGTCAGGTTCAACTTAAGGAACAACTTGGAACGGCATCTCAATAAACATACACAGAATGAGACTCTCTATAAATGCCAGTTTTGTCCGGAAATGCTTCTTGATGAGGCATCATTAGAAGAACATGAAAAACTGCATGAAATGGTTGAGGAAACTAGAACCCATCATTGCACCGAATGTGGAAAAGTATTCACCTCTGCAGGTTTCTTGAAGAAACATGTGGAACGCTTCCATCTTGGATTGACCTACAATAAAAATCTCCGAGTACCTTTTGAATGCGAACTCTGTGGTAAAGTCTTATCTTGCAAAGCCACACTATACAGTCATATGAAAAATGTTCACGAGAAGAGTCAGAAACACTTCACTTGTGAAATTTGCGGAAAAGTGTTAAAAACAAAGACATCATTGGAATTGCATACAAACTACCACAATGGTAATTGTCCTTTCAAGTGTGGTATTTGTGGAAAAGCTTTTACCAATGCTACCACTCTGAAGAGTCATTCCTTGATACACACTAACGAGAGACCACATGAGTGTCAGGTGTgtcataaaactttcaaacagaAACCACACCTTACCACTCACATTCTCACGATTCATACCGCCCTCAAGCTGTTTAAATGCGACTATTGCGAGAAAACATTCGCTCTAAAAGGAAATTTATCGCAACACTTGAAGACACACACCGGGTGTGAATCACCTTTTGTTTGTTCTGTTTGTAACAAAGCCTTCTATTTCGCTAGCAGACTGAGGAAGCATGAGAAAATTCATATGAAACCGGCATTATCGCCTCGTCAGGTACCTAATGAGAATGGATCTAGCAGAAAACGACCAGTGCAGATAATGTGGGGAGGAGGAGGAAATCCCAAACCACCTAGTAATGGAATGCAATGA
- Protein Sequence
- MLAFLCCNDNFLKTSSNTRVNNFGEIESPCLTPVCIGIIPVVEISFVDYKKAFDSVETWAVIEAMNNARIDSRYTNLIEDIYQDATLQFSMQIPVLGHVKVEIENQDEEYLSQMVHDQGSMNSTGMEVKYIKQNGDGEEQEIWLQDDNEGEEEDLEPTQSVENYEDMNNILQSVKVLNPFHFADGTAYVQGDAQEVDGEGYQTIEFIDGDGNYMQGTVADTKQREKIHVCRICNEGFHTSRDLNNHAQIEDHPQRCCNTCFEPFHTYSALIKHCMDNQHARPPMFKCPYCFKKCDNKQILQSHIKNHVKTNNIKVTKDKKGNLGCQVCRTAFVSVADLKQHYKENKESHLTCHICLEKFNNISKLDSHLKQHDAEKPFVCQVCGVRFNLRNNLERHLNKHTQNETLYKCQFCPEMLLDEASLEEHEKLHEMVEETRTHHCTECGKVFTSAGFLKKHVERFHLGLTYNKNLRVPFECELCGKVLSCKATLYSHMKNVHEKSQKHFTCEICGKVLKTKTSLELHTNYHNGNCPFKCGICGKAFTNATTLKSHSLIHTNERPHECQVCHKTFKQKPHLTTHILTIHTALKLFKCDYCEKTFALKGNLSQHLKTHTGCESPFVCSVCNKAFYFASRLRKHEKIHMKPALSPRQVPNENGSSRKRPVQIMWGGGGNPKPPSNGMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00130741;
- 90% Identity
- -
- 80% Identity
- -