Adec002127.1
Basic Information
- Insect
- Adalia decempunctata
- Gene Symbol
- -
- Assembly
- GCA_951802165.1
- Location
- OX637695.1:28062197-28076662[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.8e-11 2.2e-08 34.9 0.0 1 39 310 349 310 353 0.90 2 4 5.3e-12 4.1e-09 37.2 0.0 1 39 364 402 364 405 0.95 3 4 1.2e-18 9.7e-16 58.4 0.0 1 45 419 464 419 464 0.98 4 4 3.6e-16 2.8e-13 50.6 0.0 1 39 471 510 471 514 0.94
Sequence Information
- Coding Sequence
- ATGAAGGATCCGCACGCCACTGCCCGGATCCGGAGGATGTTGGAAGTCGACGAAAGCAGTCTCAAGATGCAAAGACACAGTGAGAAGTTGCACGTCCTTGAACCCTGTATTGATTGCTACGGGGGGTCGCTCCTCAAAACTGCCGATCAGCTCCGCATAAAGGGCCTCTGCGAATCCAGCAGCCCAGAAGACAACCCCGAATTCGAGCACTTCCACTCCTCCAACGTGACCCGGATCAGGAAATCCGTCCGTCCTAGGAACGAGGATTCCCTGGATgactccagaagggagaaagtgagGAAGTTGGCCACTCCTAAATTGGAACAGTGCGAAGTTGAAGAAGAAGGAACGACTTCGAAGGATGGCAGATATGAGGAGATGCCGGTGAATGCAGATGGTACGATACGCGATACGGATCCTCAAGGAAGAACAGCATTTAACATGAGTAGCCAGGGGCTCCTTGCCGGCCAAACGTTATTCTCTCACTTTGGCGTGGACACAGATGACTTCCCTCCAGAACCTCCCGCGCCGTCGGCCATACCGGTCGGTCATGTGGACATGGACCATTCGCCCACCAGAACCTTGCTCAACAGTAGTTCCATCCATAGAACGGACATCTCGGATTCCAAATACGAGATCAAGAAAGAAGCCATAGACATTAAGTTCGAGACGCTGCGCTCCTACGATCAGGACTCGTTGCTGGAGATGGATTCGCACAATTCCAGGATGTCCGGTGCCGATCTGTCCAGGGACAGTCATGACGATCAGGATCAATCCATGCAATCGATGTTAGTGACGCCGGAGCTCATGGGTATGGTGCCTGGAGTGTCCAGTCGTTCGGAAGACATAATGAACGGTGGCGGTGATATGCTGATGGGAAAAAATTCTTCAGAAACGTCGAGAAATCAAGGTGGACCTAAGACATGGACTCAGGAAGATATGGACATGGCTTTAGACGCATTAAGGAATCATAACATGAGCCTGACAAAGGCTTCTGCAACCTACGGCATTCCCTCCACTACTTTATGGCAGAGAGCTCATAGATTAGGAATAGATACTCCAAAGAAAGAAGGCCCAACGAAGTCCTGGACTGAAGAAAACCTAAATAACGCCTTAGATGCTCTAAGAACGGGAACTATATCGGCTAATAAAGCCAGCAAAGCTTTCGGTATTCCGAGCAGTACATTGTACAAAATAGCCAGAAGAGAAGGGATCAGACTGGCAGCCCCTTTCAACGCAGCGCCTACAACTTGGACACCAGAGGACCTCGAGAAGGCCCTGGAATCTATAAGGTCTGGCCAGACTTCTGTGCAAAAAGCATCGACAGAATTCGGAATACCGACAGGGACCCTGTATGGAAGGTGTAAAAGAGAGGGCATTGAACTGTCGAGATCCAATCCAACACCTTGGTCCGAAGATGCAATGGGAGAAGCCTTGGAGGCTGtcagGCTAGGCCATATGTCCATCAACCAAGCGGCCATCCATTACAACCTACCATATTCTTCTCTATACGGAAGGTTCAAAAGGGGTATAAAATACGATTCAGAAAACTTGGAAGGAAATACAGACAGTAATTCACACCTAGAAGTAGCTTTCGGCATGGAATACGGAAATCCTATTCAACAACAGATTCAATATCAGAATCAGACCAGctga
- Protein Sequence
- MKDPHATARIRRMLEVDESSLKMQRHSEKLHVLEPCIDCYGGSLLKTADQLRIKGLCESSSPEDNPEFEHFHSSNVTRIRKSVRPRNEDSLDDSRREKVRKLATPKLEQCEVEEEGTTSKDGRYEEMPVNADGTIRDTDPQGRTAFNMSSQGLLAGQTLFSHFGVDTDDFPPEPPAPSAIPVGHVDMDHSPTRTLLNSSSIHRTDISDSKYEIKKEAIDIKFETLRSYDQDSLLEMDSHNSRMSGADLSRDSHDDQDQSMQSMLVTPELMGMVPGVSSRSEDIMNGGGDMLMGKNSSETSRNQGGPKTWTQEDMDMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYDSENLEGNTDSNSHLEVAFGMEYGNPIQQQIQYQNQTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00415795;
- 90% Identity
- iTF_00349400;
- 80% Identity
- -