Basic Information

Insect: Acronicta psi
Gene Symbol: -
Assembly: GCA_946251945.1
Location: CAMIUM010000031.1:1304368-1311671[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 1.7 1e+02 3.9 1.1 1 23 52 75 52 75 0.95

2 21 0.046 2.9 8.7 4.1 1 23 82 104 82 104 0.98

3 21 5.2 3.2e+02 2.3 4.0 1 23 185 207 185 207 0.96

4 21 0.0018 0.11 13.2 1.0 2 23 213 234 212 234 0.97

5 21 2.1 1.3e+02 3.5 1.4 1 23 240 262 240 263 0.94

6 21 0.21 13 6.7 3.4 2 22 508 528 507 528 0.95

7 21 0.088 5.5 7.9 2.6 1 23 625 647 625 647 0.95

8 21 0.61 38 5.2 0.3 2 23 785 806 784 806 0.96

9 21 0.039 2.4 9.0 0.5 2 23 896 917 895 917 0.96

10 21 0.14 8.4 7.3 0.3 1 23 925 947 925 947 0.97

11 21 5.1 3.2e+02 2.3 2.6 1 23 983 1005 983 1005 0.93

12 21 0.00025 0.015 15.9 4.0 1 23 1013 1035 1013 1035 0.99

13 21 6.6 4.1e+02 2.0 5.0 1 23 1116 1138 1116 1138 0.97

14 21 0.053 3.3 8.6 0.6 1 23 1194 1216 1194 1216 0.96

15 21 4 2.5e+02 2.7 0.0 2 23 1223 1244 1222 1244 0.95

16 21 0.13 8 7.3 1.9 1 23 1314 1336 1314 1336 0.94

17 21 0.0056 0.35 11.6 1.1 1 23 1342 1364 1342 1364 0.96

18 21 0.0069 0.43 11.3 2.6 1 23 1454 1476 1454 1476 0.97

19 21 0.00017 0.011 16.4 1.4 1 23 1482 1504 1482 1504 0.99

20 21 0.86 53 4.8 2.7 1 23 1595 1617 1595 1617 0.96

21 21 0.01 0.62 10.8 5.6 1 23 1628 1650 1628 1650 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	1.7	1e+02	3.9	1.1	1	23	52	75	52	75	0.95
2	21	0.046	2.9	8.7	4.1	1	23	82	104	82	104	0.98
3	21	5.2	3.2e+02	2.3	4.0	1	23	185	207	185	207	0.96
4	21	0.0018	0.11	13.2	1.0	2	23	213	234	212	234	0.97
5	21	2.1	1.3e+02	3.5	1.4	1	23	240	262	240	263	0.94
6	21	0.21	13	6.7	3.4	2	22	508	528	507	528	0.95
7	21	0.088	5.5	7.9	2.6	1	23	625	647	625	647	0.95
8	21	0.61	38	5.2	0.3	2	23	785	806	784	806	0.96
9	21	0.039	2.4	9.0	0.5	2	23	896	917	895	917	0.96
10	21	0.14	8.4	7.3	0.3	1	23	925	947	925	947	0.97
11	21	5.1	3.2e+02	2.3	2.6	1	23	983	1005	983	1005	0.93
12	21	0.00025	0.015	15.9	4.0	1	23	1013	1035	1013	1035	0.99
13	21	6.6	4.1e+02	2.0	5.0	1	23	1116	1138	1116	1138	0.97
14	21	0.053	3.3	8.6	0.6	1	23	1194	1216	1194	1216	0.96
15	21	4	2.5e+02	2.7	0.0	2	23	1223	1244	1222	1244	0.95
16	21	0.13	8	7.3	1.9	1	23	1314	1336	1314	1336	0.94
17	21	0.0056	0.35	11.6	1.1	1	23	1342	1364	1342	1364	0.96
18	21	0.0069	0.43	11.3	2.6	1	23	1454	1476	1454	1476	0.97
19	21	0.00017	0.011	16.4	1.4	1	23	1482	1504	1482	1504	0.99
20	21	0.86	53	4.8	2.7	1	23	1595	1617	1595	1617	0.96
21	21	0.01	0.62	10.8	5.6	1	23	1628	1650	1628	1650	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGCCAAGCGCACAAGTCGGCGAGGTCGCCACTATCGTGCGCCACCTTGAAGGCCGCGGCGACGTCTCTTCGGAGGCTTCCTCAGATGCCGCGGAAGATTCTGAATTACCACAGTGCAAGATCAAAAGGAATTATAATTGCACCAAGTGCACGTTCTTTACGCAGAACCCGCGCGCTTATCTCGTCCACACGCGTGACGTTCACTTTGTTAGACTTAAGATTTACGATTGTCCACACTGCGTTTACGCTTCGAGACATCATCAAAAACTGATAAGACATCTTATGGTTCACGCGGAATCGAAGAAGGCAACGGCGGCCGCAAAGATGGATACTGAGAAATCTCCACCCGCTTGCGACAAGGAGCAAGCAGAGCGCATCGAAGACTTACTGGAAGAAGTCGAGGACTGCGAAGATATGATGATGGAAGTGGACGATGACTCCTTCGAACGTCATGATGATACTGACGTTGAATGTGATAGAGGTGCAGACCCAGCAACGCCCCCTGAAGTATTAAAACCTAAGGGCAAGTTCTTCTCCTGCGATAAGTGCAACTATGTGACCCACATAAGAGCTAGATTCACAAAGCACGTCAAATACCATTCGATGCCAATGATCAAGTGTACAATGTGTGATTTTCGTACACCCTACAAATGGAATTTGGATCGCCACATGAAAAACCACGGTGGAACTGGAAGTTTCAATTGTTCGATGTGCAACTTTACGGCGGACATCAAGCAGAGTCTGACGGTGCACGAAATGAATCATCACACACCGTCAGCGGGCCAGTCGCTGTCGACTCGCCGCCGCAACCGGGTGGGCGCCAGCGACACGGTTATTGCGGAGTTCGACGCAGCGAGCGCGTTGCTCCCCAAGGAGGAAGAAGGGAGCGGCGACTCGCGGTCCTCACACTCGTTCTCGGACATGGGTCTTCAATTCGCTGAAAGGGAAATGGTCAATTGCAAAAGTGACTCAAACGACGGTACTGCTTCTGACTCCATTAACAAAAAAGATGCCTCGCACCTGTCTCCGGACGGGTACAACCAGCTTTCGCCGAACCATAGCGCAGATGAGAAGTCACAAAGACAAAACAGAAAAATTCCCAGACCAATACCACAACTCATACCGTTAAATGCGTCAACTCCAAACCAAAAGCCAGCCTGTCCTGGTGAACCACCACACAAAAAGTTTAAGGAATCTGTACCGAATGACATAGAAGATTCCAATTCAGGAAGTAAGACTGAAGACTTGTCTAGTGATGTTAATCTATTTCCTGTCAATTCGTCGATAAAAGAGACTGCAGGTCGTAAGAAAAACGAATCGTTTTTCGATAGACTAAAAGAAAGACTACTAACAGAAACAGGTGAAGAAGGATCTCTTAAATGCAAAAATTGTGGATTTGAAAGCAAATGTCTATCAGAACATTCTGTACATGAGAAAAATTGTTCACCACAGACTAACCGGATCAATGCAAACTCATCACTTACAAGTTTAAGTTCCACTCGATGTCAAAATTGCAGGCATAGGTGTAAATCTAGTGCCGATCTGTACATCCACATGCAAACTTGCGGAAAGAATAAAAAGACGGAAGACGAAAATACTGTCCAAAGTCAAGATAGTGATGATGCAATCATTCCAACCCATGAAAAAGAGACTGAACCACATCCAATGGAAAATGTCGTGTTTGTGTGGAACAACATTAGTCATGACACTAACAAGTTTGATGTACCTCTGGACATAAATATAAATGATGATAGCACTCTACCAGAAATACATAGAGGTTTCGATGCTGAGGTCGTCGATGAAAATGAAACTATGAATTTGTCGCCGAGTCAAGCTGTGGGACGGAAGGTATTTAAATGTCCACATTGTCCATTTTTCTCCACTACAGCATCCAGATTCCACGTACATATTGTTGGTCACTTAAACAAGAAACCGTTTGAGTGTTCCCTCTGTAAATATAAATCTAACTGGAGATGGGATATAACCAAACATATAAAATTGAAATCTGCGAGAGATCCAGAGCATAACGATGCGAAAGTATTAATGACCGATGAAACAGGACGAAGAAACTATAGCAAATATAACAAATTCTTAGCAATGCCAGTTTTAAATGAAAATGGCGAAAATGAATTTCACTATCTAGATCCCAACACATCGGTTGATGGCTCGATGGAAATAGATGAATCATTAAATGATGTATCAGACGTAATGAGTACACAATTTGAAATGCAACCGCTTAACTTACAGACTCAACACAGTGAAGATAAATACGACTTTATAGATAATAACAGAGGTCTACATGATTTGAAGAAACCTAAGAGAACATTGTGGAAATGTAAAAAATGCAATTACAAGGATCCCTCAAAAGAAGCTCTGCTAGAGCATGTTCGTGAACACTCCAGATCGGATGGCATCCAAGAAGAACCAAACAAATCAAGAAAACTATCTCAATCTATCGATCTCAATCCTATTATCAAAAAAACTGAAAACACTCCCGATCCAGCTGATCTGGCGTATCGGTGCGGTCATTGTAATCAACTATCTAATTGGAAACATGTCATCCAGCGTCATTGCCGATTGAAACACGACGGAGTTATAAAAGTCATAACTACAGTAAAACCAAAACCAGACCCACCAATGAACATTAACGAGATTAATATCGACACTTGCAACAAGTGTCCGTTCCGATCAACTGACAAAAAAGTACTTATTGCTCATTTACAACAACATCAACCTTCGCCGAATTCAATCTTTAAGTGCTACTTCTGCCCATTTTTCGTAAAGGATGAACCAGAACTAATTCAACATCTTCTCCTTCATGGTATCACTGACCCCGAAGATTACATTGCAAAAGCAATGGGTACCAAATCTCCAGCGCCAGAATTGCACGCAGCTCCTACTACATCATACAGTCACACGAAGCGTCACAAATGCATAGAGTGCCCATACGAAACGAACAGCAAGTCACAATTTATGTATCACGAACAATTCCATCGACTTCCGGCAGACACCCCTTATAAATGTCCAGAATGTAACTACAGCGTATCTAAAAGACACTTGCTCCACCAGCATCTACGAGTTCACGGCATTGCTAGCAAAAGAGTTGAAAGTGAGGCCGAATTAGAAGCATCGATATCGGCTCAAAATAAGTCAGACGTAAAATTAGATTTAGATGAAATACCATATGTTTGGGTATCGGCAAAGAACGAATTTCATAAAATGTACAAGTGTCGGTATTGTTCATACGTTAATTCCCATAAATGCAAAATTCCAAATCATGAAAAAATACATTGTATCGTATTTGAAAACAATGACACAACTATTTACAAGTGCTTAGAATGCAAATTTACATGTGATAGCGCCTGCAGACTAGCTGAGCATTCTAAATCACACGGCGAAATATATGGTCGCATATATTGTCCGGTTGAAGAAGATGTGCCCGATGAAGAACAGATTAACAAATTACGAAAAGTTATAGAAATTGAAAAATCAACTAATTCGGAAGGTTTTCCTAGAGATGAAAGTTCAGCAAACGAAAGTAGAGAAATAAAATTATTATATTTTTGCCAAAAGTGTCCAGCAAGATTTTTTGATGACGAAGAATTAGAAATTCATACCAAGTTTCATGATGTAACACATGCAATCACGTGTAAAAGTTGTGAATTTTCAGTTCCCGAAGAGGGCGAATTGGCAGCACATGTTACCGTTCATACAGATGAATATCATACCAAAACAAAGATGCTTAAATTTATTCATAACTCACATCCTTCGCATAAACAGCCCGTACTAGAACTACTGCACTGTCCAAATACTTCCGAGATTACGTGGATATCTACCGGACCAAGCAAAGTTAGCAAAGTTGAAAATATTGAAAGTCCTGTAAAAAAGACTAATGATACAAAAAATGTGCCAAAACAATATCATTGCAAACTATGTCCTGCGAAGTTTTTCAAAACTTCAGCGCTTACATATCACTTGGGTTTACATGGAGGCGAAGGCGAGCATAAGTGTAAGAAATGTAACTATGCTGTAAAAAATATTGGAAATTTAGCCAAACATGAATTACTACACGAAAATGAGAGCAAGACTACAAATTGTGACTATGAATCTGGTGAAGATATGGATTACAAGAATATTCCATTGTCAGGCACAGATCTGTTCCAGAGAAAGACTGAGGCTCAAAAAAGAGTCTTAACTGATAAAGATAAGTTAGTTAAGCCAAACGATCACTTTCCGCCTGTCTTACAGGCTGATCCACAATTCGGTTATTTGATGCATGGTAATCCCGAATTTATATATCCCACGTACCTGAAAAATGGACGCCAAAAAGAAAAGCGATACAAATGCCACAAGTGCCCCTCAGCGTTTGAAAAACGAGAACAATATAAGATTCATTTATCATTGCATGGTTCCAAACAAAGATATAAGTGTGAATTATGTGACTATTCAGTAAAATATTACGCTAATTATGTTCAGCATATGAGGAAACATCAAATGAATGATGAAGCTCAAGCTGAAAGAAAGAAAGGGAACAACGATTTTATCGAATCTGAAAATCAAAAAGAAGTTAAACAAGATGACAGTAGTGATAATATTAAACTTGCAATAAAAACTATGCCAAAGGGGGCTCCTAGAAGTGACTTTCAACAATTCTCAATAAGTGACCAACAAACGTTGAGACTGCTGCAGCGCAGACGGTCAATGAATAATTCTAACAAGGATGGAACGTCAGAAGTTTCGCCTACGAAAGAACGAAAAATGCACATGTGTTTATTATGTCCCTACACAAATCAACGTCAAGATTCTTTATCAAATCATTATCGAAGGCACGGTGACATTGATGTTCTTAACGCAGGAAGTCATAAATGTTCCCACTGCGATCTTGTAGTCGTGCAGTCACATTTCCTGCGAGAGCATCTGAAGACGCACTTCAACTACCACAAAACCCTTATTCCCGAATGTTTTGTGGCTAACGAAGACGTCAGTTTTACTATAACTAAACTGGATGAAGACAGTCAGTCAGTTGATCTCAAATTAGACATGCAAAACAAGAGATTTGCATGTAATGAAGAAAAAATTTTTGTGAAAATTAAAACAGGAGAATTATTGGTAGAATAA
Protein Sequence: MLQQMSSPPSAQVGEVATIVRHLEGRGDVSSEASSDAAEDSELPQCKIKRNYNCTKCTFFTQNPRAYLVHTRDVHFVRLKIYDCPHCVYASRHHQKLIRHLMVHAESKKATAAAKMDTEKSPPACDKEQAERIEDLLEEVEDCEDMMMEVDDDSFERHDDTDVECDRGADPATPPEVLKPKGKFFSCDKCNYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGTGSFNCSMCNFTADIKQSLTVHEMNHHTPSAGQSLSTRRRNRVGASDTVIAEFDAASALLPKEEEGSGDSRSSHSFSDMGLQFAEREMVNCKSDSNDGTASDSINKKDASHLSPDGYNQLSPNHSADEKSQRQNRKIPRPIPQLIPLNASTPNQKPACPGEPPHKKFKESVPNDIEDSNSGSKTEDLSSDVNLFPVNSSIKETAGRKKNESFFDRLKERLLTETGEEGSLKCKNCGFESKCLSEHSVHEKNCSPQTNRINANSSLTSLSSTRCQNCRHRCKSSADLYIHMQTCGKNKKTEDENTVQSQDSDDAIIPTHEKETEPHPMENVVFVWNNISHDTNKFDVPLDININDDSTLPEIHRGFDAEVVDENETMNLSPSQAVGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAMPVLNENGENEFHYLDPNTSVDGSMEIDESLNDVSDVMSTQFEMQPLNLQTQHSEDKYDFIDNNRGLHDLKKPKRTLWKCKKCNYKDPSKEALLEHVREHSRSDGIQEEPNKSRKLSQSIDLNPIIKKTENTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPPMNINEINIDTCNKCPFRSTDKKVLIAHLQQHQPSPNSIFKCYFCPFFVKDEPELIQHLLLHGITDPEDYIAKAMGTKSPAPELHAAPTTSYSHTKRHKCIECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIASKRVESEAELEASISAQNKSDVKLDLDEIPYVWVSAKNEFHKMYKCRYCSYVNSHKCKIPNHEKIHCIVFENNDTTIYKCLECKFTCDSACRLAEHSKSHGEIYGRIYCPVEEDVPDEEQINKLRKVIEIEKSTNSEGFPRDESSANESREIKLLYFCQKCPARFFDDEELEIHTKFHDVTHAITCKSCEFSVPEEGELAAHVTVHTDEYHTKTKMLKFIHNSHPSHKQPVLELLHCPNTSEITWISTGPSKVSKVENIESPVKKTNDTKNVPKQYHCKLCPAKFFKTSALTYHLGLHGGEGEHKCKKCNYAVKNIGNLAKHELLHENESKTTNCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGNNDFIESENQKEVKQDDSSDNIKLAIKTMPKGAPRSDFQQFSISDQQTLRLLQRRRSMNNSNKDGTSEVSPTKERKMHMCLLCPYTNQRQDSLSNHYRRHGDIDVLNAGSHKCSHCDLVVVQSHFLREHLKTHFNYHKTLIPECFVANEDVSFTITKLDEDSQSVDLKLDMQNKRFACNEEKIFVKIKTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01342576;
90% Identity: -
80% Identity: -