Apsi001921.2
Basic Information
- Insect
- Acronicta psi
- Gene Symbol
- PAXBP1
- Assembly
- GCA_946251945.1
- Location
- CAMIUM010000006.1:2427778-2441338[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 5.6e-05 0.39 10.5 0.0 6 43 524 562 519 564 0.85 2 6 5.6e-05 0.39 10.5 0.0 6 43 557 595 556 597 0.87 3 6 5.6e-05 0.39 10.5 0.0 6 43 590 628 589 630 0.87 4 6 5.7e-05 0.39 10.5 0.0 6 43 623 661 622 663 0.87 5 6 5.7e-05 0.39 10.5 0.1 6 43 656 694 655 696 0.87 6 6 6.7e-17 4.7e-13 49.6 0.2 6 190 689 856 688 867 0.77
Sequence Information
- Coding Sequence
- ATGTCGTTATTCCGAAAGCCTAAAAAGATTCAGCGTCGGATGTTTTGTGCTGATGATGACGAGGATGGGGAGCCCGAGGCGCCGCCACCGCCAGTCATCAGTCAAGAAAAGGAGAAGAAGGAGGCTAAGTCCGCCAAGAGCACTACTCTGTTAAGTTTTGCCGACGAAGAAGAAGAAGGTGAAGTATTCAAGGTGAAGAAGTCATCACAGAGTAAGAGAATGGCCAAGAAGAGAGAAAAAGAGAAACAGAAGCGTGATGTGAGAACAGATGGTGATAATAACAAATATGACAGTATCATAATAGAGGAAAAGAACAACCACATAGAAGGCAACAATGACAAACCGAAACCAAAGAAGAAGGTGACGTTAGAGGGGCTGATACTGTCGGGGCGGGAAGCGCTCGCGGCGGACGGGGCGGGGGACGTGTCCGATGAGAGCGCCGCCGCTGAAGAGGACGAGGACGAGGAGGACAACAGGGGTTTCCATCGGTACCGCGCGGAGTCCGTCAGGGCCGCGCTGTTGGGCGCGCCCGGCCGCATTCCCGACGCCGCGCTCATCCACGCCGCTCGCAAGACCAGACAGCAGGCTCGTGAGTTGGGCGGGGACTACATTCCTGTGAAGTCGGAGGCGGCGCCCGGCTCGCGCCTGGTGCGTGACGACGGCTCTGGCGATGACGAGGAGGAGGGTAGGATACTTGTTCGGGGACTGGATCTGCCCAGTGATAAGCCCAAGCGTGGCACAGCAGCTGCTTCGGAAGAGGAACTGGACAGTGAGGCTGAGGAGTGGGAGGAACAGCAGCTGCAGAAGGCCAGGCCCGCCATCATGGATCTCACTGGTGATGGTGCCGTAGAGGTGAACCCGTTTTCGGTAGCCCTGCCGGCGCCGCAGATGGCAGCACCGGAGCACTTGCGACCGCTCACCACCACAGACACACAGCCCCCAACGTCTGCCAATGAGCTTGTCGATGCACTTAAGAAGCGATTGGAAGAGCTGGAATTGGAACGTTTGGTGACGTCACAGACTCAAAAAGATCTCCGCGAGAGGTTGTTGACGGCCGCGCGAATACGCGAGAGCCGCGCCTCGCGCTGCGCCGAGCTGGACGCCGCCTACCGCCGTGCGCAGGCCATCCGCGGGTACCTCACCGACCTCATCGAGTGCTTAGACGAGAAAATGCCACAACTGGAGGCGTTAGAAGCTCGCGCGTTGGCGTTACACAAGCGTCGCTGTGAGTTCTTGATCGAGAGGCGACGAGCTGACCTGCGGGACCAGGCGCAGGACGTGCTCGCTCCACCTGGTCGAACGGCGGCATCGAAGCCGGCGGAGAGCGAAGAGAAGACTCGCAGAGCGGCCGAGCGCGAGGGGCGGCGCCGCGCGCGGCGGCTGCGGCGCGAGGCGGCCGCCGCCGCCGCCGGCGCCGCGCTGCCGCACCGCGACGGAGACTCCTCCGACGACGAGCTGCCGCCGCACGAGCTGCACCACTACACGCACGAGCGAGACGCCATCCGGCAGCAGTCGGCGTCGCTGTTCGCGGACGCGCTGCCGGCGTGGCGCAGCGTGCGCGGCGTGTGCGGGCGCCTGGCGCGCTGGCGGGCGCGCGCCGCCTCGCTCTACACCGACGCCTACGTGGCCGACTGCCTGCCCAAGCTGCTCGCGCCTTACGTCAGACATGAGCGCCTGGCGCGCTGGCGGGCGCGCGCCGCCTCGCTCTACACCGACGCCTACGTGGCCGACTGCCTGCCCAAGCTGCTCGCGCCTTACGTCAGACATGAGCGCCTGGCGCGCTGGCGGGCGCGCGCCGCCTCGCTCTACACCGACGCCTACGTGGCCGACTGCCTGCCCAAGCTGCTCGCGCCTTACGTCAGACATGAGCGCCTGGCGCGCTGGCGGGCGCGCGCCGCCTCGCTCTACACCGACGCCTACGTGGCCGACTGCCTGCCCAAGCTGCTCGCGCCTTACGTCAGACATGAGCGCCTGGCGCGCTGGCGGGCGCGCGCCGCCTCGCTCTACACCGACGCCTACGTGGCCGACTGCCTGCCCAAGCTGCTCGCGCCTTACGTCAGACATGAGCGCCTGGCGCGCTGGCGGGCGCGCGCCGCCTCGCTCTACACCGACGCCTACGTGGCCGACTGCCTGCCCAAGCTGCTCGCGCCTTACGTCAGACATGAGCTGTTACTGTGGAATCCACTGGCTGACGAAGACAACGAGGATTACGAGAAAATGGAGTGGTACAAATGTCTGATGATGTACGGCGTCCGCACGGAGCGCACCGAGGACGACTCGTCGGACTCGGGGGCGGAGGCCGAGCCCGAGCCGCCGGCGCCCGCGCCGCTCACCGAGGACTCCGTGCGGGCCGACCCCGACCTGCTGCTCGTGCCCACCATCATCAGCAGGGTCGTGCTGCCCAAACTCACTGAGCTGGTGGAGCAGGCGTGGGACCCGCTGAGCGTGCGCGCGTGCGTGCGGCTGCGGCGCGGAGTGCTGCGCGCCGCCGCGCTGCCCCGCGCCGCGCCCGCCACGCGCCGCCTGGCCGCCGCCGCGCGCGCGCGCCTGGCGCAGGCGCTCGCCGCAGACGTGTTCCTGCCCGCGCTGCCGCCGCAAGTGATGGAGGGCTCAGGCGGTGCCTTTTGGCGGCGCTGCCTCGGCGCGGGCGTGAGGTTGCTACGCGCCACGCTGGCGCTGACCGGGCCGCCCGCGCTGCTGCGGGCTGACCCACTTGTGCTGTCGCTTATCGAGACGCTGTGCTGCGGCGCGGGCGCGGCGGCGGGCCCGCAGGCGGCGGGTGCGGGCGCGGCGCTGGCCGCCTCGCTGCCGCGCGCCGGCCCGCTGCGTGCGCGCGCGCTGCGCCGCCTGGCCGCGCTCGCCACGCTGGCGCTCTCGCGCCTCGACACCGACAACCCGCTGCACCTGAAAGCCTTGGAACAAGCACGGGGGATAATAGCTGAAGCGCGCGCAGCTGAATGA
- Protein Sequence
- MSLFRKPKKIQRRMFCADDDEDGEPEAPPPPVISQEKEKKEAKSAKSTTLLSFADEEEEGEVFKVKKSSQSKRMAKKREKEKQKRDVRTDGDNNKYDSIIIEEKNNHIEGNNDKPKPKKKVTLEGLILSGREALAADGAGDVSDESAAAEEDEDEEDNRGFHRYRAESVRAALLGAPGRIPDAALIHAARKTRQQARELGGDYIPVKSEAAPGSRLVRDDGSGDDEEEGRILVRGLDLPSDKPKRGTAAASEEELDSEAEEWEEQQLQKARPAIMDLTGDGAVEVNPFSVALPAPQMAAPEHLRPLTTTDTQPPTSANELVDALKKRLEELELERLVTSQTQKDLRERLLTAARIRESRASRCAELDAAYRRAQAIRGYLTDLIECLDEKMPQLEALEARALALHKRRCEFLIERRRADLRDQAQDVLAPPGRTAASKPAESEEKTRRAAEREGRRRARRLRREAAAAAAGAALPHRDGDSSDDELPPHELHHYTHERDAIRQQSASLFADALPAWRSVRGVCGRLARWRARAASLYTDAYVADCLPKLLAPYVRHERLARWRARAASLYTDAYVADCLPKLLAPYVRHERLARWRARAASLYTDAYVADCLPKLLAPYVRHERLARWRARAASLYTDAYVADCLPKLLAPYVRHERLARWRARAASLYTDAYVADCLPKLLAPYVRHERLARWRARAASLYTDAYVADCLPKLLAPYVRHELLLWNPLADEDNEDYEKMEWYKCLMMYGVRTERTEDDSSDSGAEAEPEPPAPAPLTEDSVRADPDLLLVPTIISRVVLPKLTELVEQAWDPLSVRACVRLRRGVLRAAALPRAAPATRRLAAAARARLAQALAADVFLPALPPQVMEGSGGAFWRRCLGAGVRLLRATLALTGPPALLRADPLVLSLIETLCCGAGAAAGPQAAGAGAALAASLPRAGPLRARALRRLAALATLALSRLDTDNPLHLKALEQARGIIAEARAAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -