Basic Information

Gene Symbol
-
Assembly
GCA_947256265.1
Location
OX366527.1:12690533-12705909[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 7.3e-10 7.7e-07 29.5 0.1 1 44 8 50 8 50 0.96
2 11 0.11 1.1e+02 3.3 1.8 5 38 610 640 606 644 0.84
3 11 1.3 1.3e+03 -0.1 3.2 15 39 646 667 636 671 0.75
4 11 0.038 41 4.7 1.1 5 44 665 699 662 699 0.79
5 11 2.1 2.2e+03 -0.8 0.1 17 26 702 711 700 720 0.78
6 11 2.5 2.7e+03 -1.1 0.0 31 41 749 759 743 765 0.85
7 11 0.7 7.4e+02 0.7 0.1 14 27 768 781 761 795 0.80
8 11 0.23 2.4e+02 2.3 0.4 17 28 813 824 800 826 0.72
9 11 0.099 1e+02 3.4 2.5 3 26 828 856 826 859 0.87
10 11 6.8 7.2e+03 -2.5 0.1 19 39 1198 1215 1195 1219 0.79
11 11 4.2 4.5e+03 -1.8 3.1 9 34 1217 1240 1209 1248 0.67

Sequence Information

Coding Sequence
ATGGCTTCTCGAAGAAAATACAGCCCACTATGGACACATTTTGAAGAAATAGCGCCGAAAAAGGCTAAATGTACATATTGCTCTCGCATCATAGCGCTATCGTCGAGTTCAATTGGCAGTTTAACTCGTCACATGAAAGCGGTGCATCCAACTATAAATATAAAAGTAGACAGACAAGAATCTACTATAAGGGAGATAGAGATTTCTGAAAGACCCCCAGTTTCACAGGCAGTGGTAAGTGATGAAACTAACACGGCCATCAGCAGCACTACCACCAGTACGGCAACGGCAACCACCAGTGCCATTACTACCACCAGTAGACAGAACATTCCTTCTATGAGAGATTACGTAATAGTAAAAAAACCATTGCCTCAACATAGATTACAACAGCTTGATGAACAACTCGTAAGGATGATCGCTAAAGGATATCATGCCTTACGCATGGTAGAAGAAAAAGAATTTCGCACATTTGTTGAAATGTTAAATCCGGGGTACACCTTGCCGACTCGAAAAACATTGTCCGAAAGCTTACTCCCAAAGTTATATAATAAAGTACTTGAGTCTGCTAAATTTCAAATAAAAAAGGCAACCGCCGTCTGTATAACAACAGACGGTTGGACATCCATCGTTAATGATGGATATATTGCTGTAACGGCTCATTTTATAGACCAAGAGATAGACAAATTGGTATCTATCATGATTGGCTGCATACACTTTGAAGAAAGGCACACTAGTTTAAATTTAAAAGACTTTCTTCATGAAAAATTTGTAGAGTGGGGTATTGACAGATATATTAGTGCAGTAGTCAGTGATAATGCTGCCAACATTGTCGGTGCAGTTCATCTCGGTGGTTGGCGGTCTATTAGATGCTTCGCTCACTCTTTAAATTTGGTTGTCCAAGCAAGTATTTGTAAAATAAAGGATTCAGTTGACAAAATTAAACAAATCGTGGAGTATTTTCACCGAAGTCCACCTGGTGCAAAAAAATTAAAAGAAATACAGGAGCAAATGCAGCTTGAACCACTAAAATTAAAACAAGATGTTGCAACTCGGTGGAATTCAACATACGATATGGTATGTCGTATAAACAAAATAAAAAATGCAGTGATTGCGACACTAGCTCTTATGCGGACAGATTTGATGCTGACTGAAAATGATTGGATCGTAATTGAAAAATCGATTCCTATATTAAATATATTTTATGAAGTAACTAAAGAGATTAGTTCTGAAGAATATGTGACGTGTTCAAAGGTCATCGTATTTTGTAAATTAATAAATTCACAAATTAATAAATGTACCGAGGAATCAGTTACTCCTATTCAAGAATTAATTAATTCATTAAGAGTACAAATGATGCTACGATTTCAAGACATAGAGAGTAATTTGCTACTCAGTGAAGCCACCATCCTTGATCCGAGATTTAAAAAAAATGGATTCAGCAATGTAAAAAATTTTGATAAGGCAGCAGCACAACTCAAATTAAAAATCGGTGCTATGGACAACATAAGTGGAATAGTGCCTGTTCAAGTTGAAGAGGCACCAATGCCTCCGCCGAGTGTGACTTCCATTTGGGAAGACTTTGATGCCGAAGTGTCGAAACTTGTGCCTGAAAATCCAATAGCAGCTGGTATTGTCGAGTTCGACAAGTACATACAAGAACCATTAATCAAGAGGCATGAAAATCCTCTCAAGTGGTGGAAGGAACGCAAAGCCTTAGAAGAGCAGTTGGAAGAAGTGACCAAGCGCAAGCAGTCTTCTAACTACTTGAACTGTCCATACAAGTGTCACTTGTGCTTTAAGGGGTTCAACAACACGCTTGCGTGGGAACACCACGTCACTAAACATTCTCCGAACTCAGGCGACGTAGAGTGTACCATATGCAAGTACAGATTTAAAACGAAACGCAATCTTCAGAGGCATGCCCTCAACCACGGGAAGAAATATGTTTGTAAATTATGTCCATACAACTCTAGCAACATTACCACGGTCAAGCATCATCTGGGTTCTCACAAAGGAGTAACGTATAAATGCGAATATTGCGACGAAGTCTTCACAGTAAGAACGACGTACGTAGTCCATATACGCAGCAAGCATCCGTCGGAGAACATTTGCGGGTACTGTGGATATTCGTTCTACAGCAAACAGGGCCTCGTCGTGCACAAGAATATGGTGCATAGAGATATAGTAAAAGCTGAAGAGAATAAAGAAGGTCCGTACTGCGCGGACTGTGACGTCACGTTCATATCTACAGAGGCGTTCAAGCGACACTTGGTGACATCCGTTAAGCACACCAAGACTGCGGACTCTATTAACGGGTGCCGGGTATGCGGCGCGACGTTCGCGGATCCTGAAGAGTTGCGATTGCATCACCGTAAGGAGCATCCCAAGAAACAGCCCCAGCACTACCGCAAGAAGACCATCAGTAACAAATGGCCAGCCAAGTGCGAACACTGTCCGGAACAGATTGCAAACGCGCGCGCTTATTGGAAGCATTTCCGTCTAATGCATCCGAACGAGAACTACCCGGTGCAAAAGAAATGCGTGTGCGATGTTTGTGGCAAACGATTCGTGTGCAACGCGCTGCTGGCGGCGCACGCGCGCGTGCACGCGGGCGCGCGGCCCTGCGCGTGCTCGCGCGCGTGCTACAGGTTACAGCTGGTCGTGCTTGTAGTGCAACGCGCTGCTGGCGGCGCACGCGCGCGTGCACGCGGGCGCGCGGCCCTGCGCGTGCTCGCGCGCGTGCTACAGTGCAACGCGCTGCTGGCGGCGCACGCGCGCGTGCACGCGGGCGCGCGGCCCTGCGCGTGCTCGCGCGCGTGCTACAGGTTACAGCTGGTCGTGCTTGTAGTGCAACGCGCTGCTGGCGGCGCACGCGCGCGTGCACGCGGGCGCGCGGCCCTGCGCGTGCTCGCGCGCGTGCTACAGGTTACAGCTGGTCGTGCTTGTAGTGCAACGCGCTGCTGGCGGCCCTGCGCGTGCTCGCGCGCGTGCTACAGGTTACAGCTGGTCGTGCTTGTAGTGCAACGCGCTGCTGGCGGCGCACGCGCGCGTGCACGCGGGCGCGCGGCCCTGCGCGTGCTCGCGCGCGTGCTACAGTGCAACGCGCTGCTGGCGGCGCACGCGCGCGTGCACGCGGGCGCGCGGCCCTGCGCGTGCTCGCGCGCGTGCTACAGGTTACAGCTGGTCGTGCTTGTAGTGCAACGCGCTGCTGGCGGCGCACGCGCGCGTGCACGCGGGCGCGCGGCCCTGCGCGTGCTCGCGCGCGTGCTACAGTGCAACGCGCTGCTGGCGGCGCACGCGCGCGTGCACGCGGGCGCGCGGCCCTGCGCGTGCTCGCGCGCGTGCTACAGGTTACAGCTGGTCGTGCTTGTAGTGCAACGCGCTGCTGGCGGCGCACGCGCGCGTGCACGCGGGCGCGCGGCCCTGCGCGTGCTCGCGCGCGTGCTACAGTGCAACGCGCTGCTGGCGGCGCACGCGCGCGTGCACGCGGGCGCGCGGCCCTACGCGTGCTCGCGGTGCGCACGCGCATGCTACAGCGCGCACGACCTGCGCGTGCACCAGCAGAAGCACTCCGACGCGCGCCCCTTCGCCTGCACGCTCTGCCCGCAGGCCTTCAAGCGGAAGGAGGCGCTCCATAGGCACATAAAGATACATTCCGGTGATAACCCATACAAATGTGAGATATGCGGGGTCGCCTTCAACAAATCGTGTACGAGAACGCTTCACGTGCGCACAGTTCACACTAAGGAGCCTCCACCATCGCGCAAACACCGAAACAAACTTCCCAAGTAA
Protein Sequence
MASRRKYSPLWTHFEEIAPKKAKCTYCSRIIALSSSSIGSLTRHMKAVHPTINIKVDRQESTIREIEISERPPVSQAVVSDETNTAISSTTTSTATATTSAITTTSRQNIPSMRDYVIVKKPLPQHRLQQLDEQLVRMIAKGYHALRMVEEKEFRTFVEMLNPGYTLPTRKTLSESLLPKLYNKVLESAKFQIKKATAVCITTDGWTSIVNDGYIAVTAHFIDQEIDKLVSIMIGCIHFEERHTSLNLKDFLHEKFVEWGIDRYISAVVSDNAANIVGAVHLGGWRSIRCFAHSLNLVVQASICKIKDSVDKIKQIVEYFHRSPPGAKKLKEIQEQMQLEPLKLKQDVATRWNSTYDMVCRINKIKNAVIATLALMRTDLMLTENDWIVIEKSIPILNIFYEVTKEISSEEYVTCSKVIVFCKLINSQINKCTEESVTPIQELINSLRVQMMLRFQDIESNLLLSEATILDPRFKKNGFSNVKNFDKAAAQLKLKIGAMDNISGIVPVQVEEAPMPPPSVTSIWEDFDAEVSKLVPENPIAAGIVEFDKYIQEPLIKRHENPLKWWKERKALEEQLEEVTKRKQSSNYLNCPYKCHLCFKGFNNTLAWEHHVTKHSPNSGDVECTICKYRFKTKRNLQRHALNHGKKYVCKLCPYNSSNITTVKHHLGSHKGVTYKCEYCDEVFTVRTTYVVHIRSKHPSENICGYCGYSFYSKQGLVVHKNMVHRDIVKAEENKEGPYCADCDVTFISTEAFKRHLVTSVKHTKTADSINGCRVCGATFADPEELRLHHRKEHPKKQPQHYRKKTISNKWPAKCEHCPEQIANARAYWKHFRLMHPNENYPVQKKCVCDVCGKRFVCNALLAAHARVHAGARPCACSRACYRLQLVVLVVQRAAGGARARARGRAALRVLARVLQCNALLAAHARVHAGARPCACSRACYRLQLVVLVVQRAAGGARARARGRAALRVLARVLQVTAGRACSATRCWRPCACSRACYRLQLVVLVVQRAAGGARARARGRAALRVLARVLQCNALLAAHARVHAGARPCACSRACYRLQLVVLVVQRAAGGARARARGRAALRVLARVLQCNALLAAHARVHAGARPCACSRACYRLQLVVLVVQRAAGGARARARGRAALRVLARVLQCNALLAAHARVHAGARPYACSRCARACYSAHDLRVHQQKHSDARPFACTLCPQAFKRKEALHRHIKIHSGDNPYKCEICGVAFNKSCTRTLHVRTVHTKEPPPSRKHRNKLPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00017630;
90% Identity
iTF_00017630;
80% Identity
iTF_00017630;