Ains007194.1
Basic Information
- Insect
- Acromyrmex insinuator
- Gene Symbol
- -
- Assembly
- GCA_017607455.1
- Location
- JAANHZ010000572.1:896894-902072[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00037 0.019 14.5 0.3 1 20 62 81 62 83 0.94 2 13 5.5e-05 0.0028 17.1 2.5 1 19 157 175 157 175 0.99 3 13 5e-05 0.0025 17.2 3.9 2 23 187 209 186 209 0.95 4 13 0.00062 0.031 13.8 3.9 1 21 215 235 215 240 0.94 5 13 1.1e-07 5.4e-06 25.6 2.4 1 23 247 269 247 269 0.98 6 13 6.2e-05 0.0032 16.9 1.2 2 23 279 300 278 300 0.98 7 13 0.00024 0.012 15.0 0.2 2 23 307 328 306 328 0.97 8 13 2.5e-06 0.00013 21.3 2.0 1 23 334 356 334 356 0.99 9 13 4.3e-06 0.00022 20.6 1.8 1 23 362 384 362 384 0.94 10 13 4e-05 0.002 17.5 1.1 1 23 390 413 390 413 0.94 11 13 1.6e-05 0.00082 18.7 0.5 1 23 419 441 419 441 0.94 12 13 1.4e-07 6.9e-06 25.3 1.1 1 23 447 469 447 469 0.99 13 13 1.6e-05 0.0008 18.8 1.5 2 23 476 498 475 498 0.95
Sequence Information
- Coding Sequence
- ATGGCAAATGGAATGGAGAAGATAGAAATCCTGAAGATTGAGGAGTGTAGTCATGATCTAATTGTGGACGAAACTAATGGGATCGTGTTTGATATGAACCTCTCACAAGACGAATCTTTAGTTGTGACTGACAGCGCAGCCACTGCCAATAAGAAAggtgTGGTTATTTCAATTGTAACCGATTATCAATGTGTGACATGTCAACGTATTTTCCAATCAAAGGACATGTTGCAGAAGCATGTAGACACATGCAGAGAGGAAGATGATTCAAATAACATGCTCGGTAATATAGTAACTTACGATtcagaagaagaggaagaggatgAAGATGATCCACTTTTAAATGCTGAAGATTCGGATTCTAAGGGCCAAAAGAATAACAATGAAAAACCTCTCATCAAACCCGTGCCCGAAACGCAGTGTCATTGCTGTGCGGAAGACTTAAAGACGGCCCATAGCGGCGGAGAATATAAGTGTTCACATTGTGATCTCAGCTTCAAGAAAAAAGCATCTTTGGAAAGACACGATGTAGTCATACATTGGACTTGCGATTCGTGCACATGCAATGAATGCGGTTCTTCTTTCCGTGATAAGAAAGCTTTAAATAAGCATCGCTATACGACACACGGAGAtcgcaaaatttttaaatgtgaTCCTTGCGACACATATTTCTCTCGGAGCTATCATTTAAATCGACATATAATGCAGTCTGGTTGTCATGGTAacatacttaataaatttagttgtCAAGTTTGCAAGAAAGACTTTACGCGTAAGGATAATTTGCGGGAACACTTGCGTACTCACGCGGGCACGCCTCAGAGACAAAAGAAGAAATGCAACTATTGCCCGAAGGAATTCTTTACGTACCAACAATTGTTGGTACACGAACGCATGCATACGGGAGAGCGACCAGTCCAATGCGATTTATGTCCGAAGACATTCCTGTCGCCGCTCGCGCTGAAAAAGCATCGTCGGGTACACACCGGAGAGAAGCCGTTTGAATGTAAATacTGTCAGAGAAAATTTGCTGCTCGCGAAACGCTGAATCGTCACCTAAGGACGCACACGGGTGAAAAACCACATGTGTGCCAATATTGTGGCAAATCATTCATTCAAGCAGCGCAATTAAGAGCACATGTGTTCCATCACACTGGAGAAAATGGTTTCTATTGTGATGTATGCGACAAGGCATTTAATCGGAAGGCGCGTTTGAACATCCACAAAAAGTTCGTACACGAGGGAGCGATTCCATTTACGTGTGAAGTCTGCGATAAAGGTTTCATGCGAAAGGAGGACTTGATGAAACACAAAGTGCTACATACTGGCATCAAACCGTTCAAATGCGACAAGTGTTCGAAGGCCTTCTCGGTGAAGTCATCGTTACAAGCGCACCTCAACACTCACAGACGCGAACCGCCCCAGTCATGCGTCGAATGCAATAGAGTGTTTATCCGACAAGATTGTCTGATGCGACACATTCGGGCGAAGCATCGGGAACTATTGGAGGACGTAATGAACGAGGTTGAGAAGAAACATTTACAAACACAGTTGTATAACATCGCATCGACCGCTGCTGCCAAAATGAAAACCGGCAAATCTAGAAGACTCTCCACCGACGAATTGTTGAAAGCTATTGTAGATCTTTTGAGATTACTTATCGATGAGGAAACATTACAGCTATTTGGTTGGCCGGATGCTCCAATACAAGATGTCCTCGAAGCTGTAATCAGAAGATGCGGACATGAGCCGATAACATCGGAGACCAACATGGTGTTTACTGAGAGGCTGCGACAAAACGTCAAACTTCTATTCACTGTTGTCGTCGACACGGTGAATGACGAAATAGTGAAATCTCTCTTGACAACGAAAACGGTGGACGATGTCATTCTTCACGTTTTAGAAATATCTAATCAAAATtag
- Protein Sequence
- MANGMEKIEILKIEECSHDLIVDETNGIVFDMNLSQDESLVVTDSAATANKKGVVISIVTDYQCVTCQRIFQSKDMLQKHVDTCREEDDSNNMLGNIVTYDSEEEEEDEDDPLLNAEDSDSKGQKNNNEKPLIKPVPETQCHCCAEDLKTAHSGGEYKCSHCDLSFKKKASLERHDVVIHWTCDSCTCNECGSSFRDKKALNKHRYTTHGDRKIFKCDPCDTYFSRSYHLNRHIMQSGCHGNILNKFSCQVCKKDFTRKDNLREHLRTHAGTPQRQKKKCNYCPKEFFTYQQLLVHERMHTGERPVQCDLCPKTFLSPLALKKHRRVHTGEKPFECKYCQRKFAARETLNRHLRTHTGEKPHVCQYCGKSFIQAAQLRAHVFHHTGENGFYCDVCDKAFNRKARLNIHKKFVHEGAIPFTCEVCDKGFMRKEDLMKHKVLHTGIKPFKCDKCSKAFSVKSSLQAHLNTHRREPPQSCVECNRVFIRQDCLMRHIRAKHRELLEDVMNEVEKKHLQTQLYNIASTAAAKMKTGKSRRLSTDELLKAIVDLLRLLIDEETLQLFGWPDAPIQDVLEAVIRRCGHEPITSETNMVFTERLRQNVKLLFTVVVDTVNDEIVKSLLTTKTVDDVILHVLEISNQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01423083;
- 90% Identity
- iTF_01477076;
- 80% Identity
- -