Basic Information

Insect: Acromyrmex heyeri
Gene Symbol: -
Assembly: GCA_017607565.1
Location: JAANIB010005807.1:1247283-1255208[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0001 0.0051 16.3 0.1 2 23 716 737 715 737 0.97

2 17 0.59 29 4.5 2.8 1 19 743 761 743 762 0.91

3 17 0.21 11 5.9 0.9 1 23 769 791 769 791 0.97

4 17 4.4e-05 0.0022 17.4 1.6 3 23 800 821 799 821 0.98

5 17 0.0021 0.1 12.2 2.0 1 23 828 851 828 851 0.95

6 17 7.3e-05 0.0036 16.7 0.7 1 23 857 880 857 880 0.94

7 17 1.3 66 3.3 1.1 2 23 888 908 888 908 0.90

8 17 1.1e-07 5.3e-06 25.7 2.1 2 23 914 935 913 935 0.97

9 17 9e-06 0.00045 19.6 0.2 1 23 941 963 941 963 0.98

10 17 0.00049 0.024 14.1 2.6 2 23 975 997 974 997 0.95

11 17 0.00079 0.039 13.5 1.6 1 23 1003 1026 1003 1026 0.96

12 17 0.022 1.1 8.9 2.8 2 23 1047 1069 1046 1069 0.94

13 17 0.017 0.86 9.3 0.4 2 23 1076 1098 1075 1098 0.96

14 17 4.4e-05 0.0022 17.4 1.0 3 23 1107 1127 1105 1127 0.96

15 17 0.0017 0.083 12.5 2.3 1 23 1133 1156 1133 1156 0.96

16 17 0.073 3.6 7.3 3.3 2 23 1163 1184 1162 1184 0.96

17 17 0.0074 0.37 10.4 2.6 1 23 1190 1212 1190 1212 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0001	0.0051	16.3	0.1	2	23	716	737	715	737	0.97
2	17	0.59	29	4.5	2.8	1	19	743	761	743	762	0.91
3	17	0.21	11	5.9	0.9	1	23	769	791	769	791	0.97
4	17	4.4e-05	0.0022	17.4	1.6	3	23	800	821	799	821	0.98
5	17	0.0021	0.1	12.2	2.0	1	23	828	851	828	851	0.95
6	17	7.3e-05	0.0036	16.7	0.7	1	23	857	880	857	880	0.94
7	17	1.3	66	3.3	1.1	2	23	888	908	888	908	0.90
8	17	1.1e-07	5.3e-06	25.7	2.1	2	23	914	935	913	935	0.97
9	17	9e-06	0.00045	19.6	0.2	1	23	941	963	941	963	0.98
10	17	0.00049	0.024	14.1	2.6	2	23	975	997	974	997	0.95
11	17	0.00079	0.039	13.5	1.6	1	23	1003	1026	1003	1026	0.96
12	17	0.022	1.1	8.9	2.8	2	23	1047	1069	1046	1069	0.94
13	17	0.017	0.86	9.3	0.4	2	23	1076	1098	1075	1098	0.96
14	17	4.4e-05	0.0022	17.4	1.0	3	23	1107	1127	1105	1127	0.96
15	17	0.0017	0.083	12.5	2.3	1	23	1133	1156	1133	1156	0.96
16	17	0.073	3.6	7.3	3.3	2	23	1163	1184	1162	1184	0.96
17	17	0.0074	0.37	10.4	2.6	1	23	1190	1212	1190	1212	0.98

Sequence Information

Coding Sequence: atgtCAAATTCCGAAATCAACAAGCGTGATCACAACTACAGTGAATCGAAACCTCAACATGCCAACAATGGTACCAGTAATACCGTTAGCAAAATATCTCAGACAGGATCTGTTGTTGGTCAAATTCGAGACATAGATGAGCTGAAGAAGATTGCGCCTCGTGTCCGTTTACAGGACACCGAGAGCTTAAATGAGTTGACAAGAATTTCATCTTTAAGTAACAGCAAGTCGCAGCAAAGTGATACATCCGTTCTCGAAAGGACGCggcaagaattaaaaaaatactgccGTACCTGCGCTGGCCTAAAACTACCTTTGgtAGATATCTTTAGTGAAAAGGGTCTCAAATTGAGATTGAGTCAGCAAATCAAGCATCTCGAAGTTAATCCTTATGATAGTAGTTTGTCCACACAGATGTGCATGGACTGTATCTGTGACCTTAGAatgagttataaattttttatgcagatAAAAAAAGCTGAGATAAAACTAAAATCTATCCATGTCAATCTCACTACTGATAATGCTATGAAGAAGGTAACGTCGATCGATGactctttaataataaaagaggaTAAGCTATCATCTTATTCAGataaaaatgtgatgacatattgtgaaaataaggaaaattctttcttcttttcagaAACAACGCCAGAATATCAATTACCCTCCACAATTCAACAAAATCTATCTTCATTATCAACAGAGCACGTAAACCAAGCAATTCTTGAAAATCAAATAGATGATTCAGTTCCCAAAATCTGTGCCATTTTTTCATTGAATGAATCAAAAATGACACAGGACTTTGAAATTGAGAAGGAAACGGAGAaggaaaaggaagaagaagacaAGGACACCGAGGAGAAAGAGGTGATACAGATAGGAGGAGGAATATTCGAGGAAGTGGCAGAAGGAGAAGATGAAGAATCTATTGAGGAATTTGATCCTGAAGACCCTGCGCTCCTGGTAgatgaagaagaggaagaagaaaaatcccTAAAAACTGTATACAAGTATGATATGGCAGCAGATTCTTATGTGAGAGTGGAAGGAAATGAGGGAATTTCTGTGAAATCTGAAATCTCCCAGACTTCAGAGGGTGAAAGTCAAAGAGAGGGAATGTGGCAACCGAAtatcttaaaaagaaaattaataccaATGATATCGAATAATGGAGGGGAAGATGAGATTCAAAGTATAGTAGAGAAGCATAAAGTGCAGAAGTTAGATACAAACAGTctcttaaatatgaataatccTTCAGAAGAAGAAGGAATTATGTACGTAACTGTGAAGGGATCCAAGCCGAACGAGATTCTTCTGGTAAAGGTCAAGAAAATGGACAAACCCATGGAACCAAAACGCGCAGTAGTGCCAGTCTCCGCTGATCTCAAGCCTGTTGAACGTTTTCTCAAACGTTATGAAACACTGACGAAGGATTTTTCATCTCGACGCCCCGACGCTCGTGAACAAATAATTGAGGAACAAAtcgaagaatataaaaagaaacgagAAAAAGTTCTTGGAAATCAGGCGGCAGTAACGTATACCGTGAACGAAacacaaaaagaaattcaagaaGAAGACATTTCtatcaaatcaaattttgaaaagatggaagaagaaataatagatataaaagaagaggatgaagaaagagagacgaagaaagaggagaaaataaaagataaggaggaagaggaaataaaagaagaagaggagaatGAGAAgcagaaagaagagaaaatggAGAAAGATGTAAAGATTGAGAAAGGTCAAGAAAGAATTAGTGATAATACAGAAGAACATTCAAAGTTATcgagaatgaaaaaattggaAGAGACAAAGCGGAAAAAGGAAAGTTTGCAAAAGGAACTAGATGAATCATGTAGCGAAgagaatttggaaaaattagcAAAAGTCTTGGAGAAAACAGAAAATCTGCAGgaaTTCCTAGAATATCTGAAGCAGCGTAAAATCATTCTTGCACGCCTCAAGGACGAGGATATAATTTCCCTCTATGAGGATCGATTCTCCACAACTATAAAATCATCATCTAAATCGCTTCCAGATCTTATGGATACTCAACATCCTACCGGTCTTCTTTTCGATCTTATTTCCGacgaagataattatttagaatgcgATTATTGTTCCGAAACCTTCCCCAACCGCGATCTCCTTGAAGGACATCTGAAATCTCACGACTACCGTATCCTTCATTGCTGCGATGATTGCGGGGAAGAATTTCAAACTAATAAAGCAAAAAGAAATCATAATGTAAtttgtgtgaaaaaatttatttgcaaatattgcgAAATAGTTCTAGATTCCAAAGGAAAAAAACGTCAACATGAGCAGAAACACGTTGATACCCTTTATGGTCAACTTTGCGAGATTTGTGGTGAAAGATTCAAACATCAAGGAACTTTGGACCAGCATCAGAAGACGCAACATACGAGTTTGGAGAAGATTTATCAATGTCCGAAATgtccaaaaaaatttgctttcaAACAAAAACTGAGCTTTCATTTAAAATCTGTTCACACTACTTTAAGAGCATATCTTTGTGAGGATTGCGGTGCGGATTTTAAGAATCCCGCGAGTTTAAGACATCATAGAATCAGAAAACATCAACCGGTTGGAAATAAGAGGGAATGTCCAGTTTGCAGAAAATTAGTGCCGTTTTATAGTTTGTCAAAACACATGCATACACACAAAGCTTACAGTATCCAATGTCCACATTGCGACAAGATGTTCAAAAACAGCTCGACTTTGAAACAACATGTGAGAATTCACGAAGATCAAAGGCAGTTCCGTTGTGATACTTGCGGCGTTGGATTTAATCGGAGGGATGGTTTGAGACTGCATTTGAGAGTGCACGAAAAAACTGGAAGTAGAGGGTTGAAAGAATGTTCCTGCCAAGTTTGTGGGGAAAAGTTCCCGAATCATTCGACTTTGGTAATTCACAGGAATAGAGAACATAAGGATGGAAAGCAGTATACGTGTCATATTTGTAATAGATCAATGATTTCACCGAGATCGCTCGAGTGGCATATGTCGCATATTCATGACCAGTTAGTACCAGgTATTACTCGCAACGAGTCTGGTCTACCTGAAAAGAAACGGGTTTCTTGCTATCATTGCAATAAGACCTTTAAGACAGAGCTGATACTTCgtacacatattaaaaatacgcaCATGGAAAAGGACCCGTTGAAATGTACCGACTGTGAAGGTATTTTCAACTCCGAAGTGCGTCTGCGTCATCATTTGATGGTCGTGCACAATCGTCTCGAGGGTACTTTGGCATGTCCTCACTGTCCAAAACGATTCGTGAATCAATTACGGCTAAAGACTCATATGATCTCCCATTCTGAGGAAAGACCATATACTTGCGAGGTTTGTGGTTTCAATTTGAAGACAAAGATTCAGCTGATCAAGCATCATCAAAACCGACATAGCGACGAGAGACCTTTGCAGTGCAAATACTGTCCTTGGCGATGTAAGCAAGTGAGTGCTCTCGTTTGTCACGAGCGTACGCATACCAATGAACGCCCATATTCGTGCAGCGTGTGCCGGCAACGTTTCAAATATCTCGGTGATAAAAACAAGCATGAACGTCGTCACGAAAGCCTCGGTGGTTCAGGTTTCAAGCGTATTGTACCCGGAAGAAATCTTAAACAGAAGAATTCGAATCCGGCGTGCGTCAATTCCGACATCGAATCCGATCAGGACGATACCGTTAAGCGCTCGGCAAGTCAACTAGATATGCATGTTACCGAAGAGCAATTCGAGGATCAACAGGAAGGacaatatgcaaatttatcaGAAGGACAAATAGTTAAGTTTGAAGAAGTCAAGTTTGAAAATGGAGAGCAATACGAACAGGTGTATGAACAGGAGTATGAAGAAACTTCGAGAGAAGCATCGGAAGCTACCGAATTAATTATGAACATAGAAGATTCCAATATGTACACCGAGGAAGTTACGGCCGATAGTATAGAGTCTGGCGCAGAAATAATAACAGATGAAATTATGACGAATGATATTTTGCAATCTGGTACCGCAGTGGTACTGCAAAGCGAAGACGACTCGGGGAAGATTCAAGTGATACCCATACCAGTGGTATTATCTCTGCCCGACTTGTCCGACGCAAACACTGAAGTTAATCTCCCAACCGCATCAATcatgtataacaat
Protein Sequence: MSNSEINKRDHNYSESKPQHANNGTSNTVSKISQTGSVVGQIRDIDELKKIAPRVRLQDTESLNELTRISSLSNSKSQQSDTSVLERTRQELKKYCRTCAGLKLPLVDIFSEKGLKLRLSQQIKHLEVNPYDSSLSTQMCMDCICDLRMSYKFFMQIKKAEIKLKSIHVNLTTDNAMKKVTSIDDSLIIKEDKLSSYSDKNVMTYCENKENSFFFSETTPEYQLPSTIQQNLSSLSTEHVNQAILENQIDDSVPKICAIFSLNESKMTQDFEIEKETEKEKEEEDKDTEEKEVIQIGGGIFEEVAEGEDEESIEEFDPEDPALLVDEEEEEEKSLKTVYKYDMAADSYVRVEGNEGISVKSEISQTSEGESQREGMWQPNILKRKLIPMISNNGGEDEIQSIVEKHKVQKLDTNSLLNMNNPSEEEGIMYVTVKGSKPNEILLVKVKKMDKPMEPKRAVVPVSADLKPVERFLKRYETLTKDFSSRRPDAREQIIEEQIEEYKKKREKVLGNQAAVTYTVNETQKEIQEEDISIKSNFEKMEEEIIDIKEEDEERETKKEEKIKDKEEEEIKEEEENEKQKEEKMEKDVKIEKGQERISDNTEEHSKLSRMKKLEETKRKKESLQKELDESCSEENLEKLAKVLEKTENLQEFLEYLKQRKIILARLKDEDIISLYEDRFSTTIKSSSKSLPDLMDTQHPTGLLFDLISDEDNYLECDYCSETFPNRDLLEGHLKSHDYRILHCCDDCGEEFQTNKAKRNHNVICVKKFICKYCEIVLDSKGKKRQHEQKHVDTLYGQLCEICGERFKHQGTLDQHQKTQHTSLEKIYQCPKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECPVCRKLVPFYSLSKHMHTHKAYSIQCPHCDKMFKNSSTLKQHVRIHEDQRQFRCDTCGVGFNRRDGLRLHLRVHEKTGSRGLKECSCQVCGEKFPNHSTLVIHRNREHKDGKQYTCHICNRSMISPRSLEWHMSHIHDQLVPGITRNESGLPEKKRVSCYHCNKTFKTELILRTHIKNTHMEKDPLKCTDCEGIFNSEVRLRHHLMVVHNRLEGTLACPHCPKRFVNQLRLKTHMISHSEERPYTCEVCGFNLKTKIQLIKHHQNRHSDERPLQCKYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVPGRNLKQKNSNPACVNSDIESDQDDTVKRSASQLDMHVTEEQFEDQQEGQYANLSEGQIVKFEEVKFENGEQYEQVYEQEYEETSREASEATELIMNIEDSNMYTEEVTADSIESGAEIITDEIMTNDILQSGTAVVLQSEDDSGKIQVIPIPVVLSLPDLSDANTEVNLPTASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00417783;
90% Identity: iTF_01477805;
80% Identity: -