Ahey005953.1
Basic Information
- Insect
- Acromyrmex heyeri
- Gene Symbol
- ttk_1
- Assembly
- GCA_017607565.1
- Location
- JAANIB010007425.1:214977-217542[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.5e-07 0.00074 18.2 0.0 5 38 192 225 188 231 0.72 2 4 1.5e-11 1.7e-08 33.1 0.0 4 39 241 275 239 282 0.85 3 4 0.058 66 2.4 0.0 21 35 309 323 295 329 0.79 4 4 1.8e-11 2e-08 32.8 0.1 4 39 353 388 350 392 0.93
Sequence Information
- Coding Sequence
- ATGACTGACACTAGCCAATGTAAAGTCAATCAGAGTTACCGTTTTAAATGGAACAATTATCAAAATCATCTGTCTAACGTTGTGCGGCAGCTTTTGGAGGAGGATTGTATGGTGGATGTCACTCTATCCGCAGATGGTCAACGTATTCATGCGCATCGCATTGTATTATGCGCGTGTAGTATTTTGtttcaaGAAGTGCTAAGTCAAGTAACAGAAGATTATCCAACGATTATTCTAAGTGATATATCTCCTCAGGATATAAAGTCGATTatcgaatttatatatcatggAGAAATTTGTGTTCCTGTTGAAAATATCAGTAGCTTACTTGAAGCTGCACggtcgttaaaaataaatggtcTTATTAATATAGATGGTgtttatgaaaatgaaattaaaggaaaaaaagatcaaGCAATGGAAGAAACTGTGTCAAGGGTAGAGGAAATTCAGGACAATGCTGAATCTTTGGAGAATGAAACTCATGAACCAAGCACTGctgaaaattgtatttcaaataaaaagaagaaacgacGCCGTGACACTGTAAAGAGAGAATACAGTGACGATATGTTAGCATCTGCAATTAATGATTTGAAATTAGGACAAACTTTAATAGAAGCTGCTACTAAGCATAATATACCACGTTCGACATTGTATATGCGGGCAAAAGCGTTAGGCATACATTTAAATGCATCAAGGAATGGATATCCTGCAGAATGCATGAATGCAGCTATAAATTCTGTGATCAATGGTTCGAGCTTGCAGCGTGCAtcagaaatatttagaataccTAAAACTGTATTATGGAGACGTATACAAAAGGAAGGCTATCAGATCTTACGTCGTCAAATGAAAAGATCATATGCTTTAGACACGAAAGAGGCCGCTGTTAAAGCTTTAGAAAGAGGAGAAAATTTGACAAAAGTTGCTCTGGagtttaaaATACCAAAGACTACATTGTTTAGAGAAAAGGCACGGCTAGTAAATCAAGGTAAATTACCGTTATCGTTTTGGAAGAAACGCAAACCTGAGAATGAGGAATCAAAGAAGTCGCGATTAGAAGAGGCTGTAGCGGCTTGCAAAGGTGGCAGAATGTCGCAGGCTGCAGCGTCCATAATGTATCACATTCCAAAAACTACGATATGGCGAAGACTTCAACAAGATGGAAAAAAAGCGGAAAAATCATCGAATGTGAAAAAGGAACGACTAACTGATACACCAGTACTGCATGACTCTCAGGTGAAAATACAAGACACGTCCAATTTCAATTATTGCGAGGTTGCATCAGAAATACCTATAACTTATATAGACGAGGATAGTATACCTCAGGATTCCGTCATAATCCTAACAACAGAAGAAATGGATGAGTTAAACTTGGAAGGAGGCAgacaaattattgtaaattcggAGTCCGGACAGGAATATATTCCATGTACAATAAGTATCGAGAATAATTCTAACTATTCTGAGACTGAGAGT
- Protein Sequence
- MTDTSQCKVNQSYRFKWNNYQNHLSNVVRQLLEEDCMVDVTLSADGQRIHAHRIVLCACSILFQEVLSQVTEDYPTIILSDISPQDIKSIIEFIYHGEICVPVENISSLLEAARSLKINGLINIDGVYENEIKGKKDQAMEETVSRVEEIQDNAESLENETHEPSTAENCISNKKKKRRRDTVKREYSDDMLASAINDLKLGQTLIEAATKHNIPRSTLYMRAKALGIHLNASRNGYPAECMNAAINSVINGSSLQRASEIFRIPKTVLWRRIQKEGYQILRRQMKRSYALDTKEAAVKALERGENLTKVALEFKIPKTTLFREKARLVNQGKLPLSFWKKRKPENEESKKSRLEEAVAACKGGRMSQAAASIMYHIPKTTIWRRLQQDGKKAEKSSNVKKERLTDTPVLHDSQVKIQDTSNFNYCEVASEIPITYIDEDSIPQDSVIILTTEEMDELNLEGGRQIIVNSESGQEYIPCTISIENNSNYSETES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01423555;
- 90% Identity
- iTF_01477029;
- 80% Identity
- iTF_00016136;