Basic Information

Gene Symbol
lilli_1
Assembly
GCA_947359355.1
Location
OX375757.1:7606788-7618356[-]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 3.4e-08 0.00028 20.1 3.3 7 140 6 134 1 172 0.54
2 9 4.3e-10 3.5e-06 26.4 12.8 349 472 235 357 216 363 0.72
3 9 2 1.6e+04 -6.2 17.6 111 249 408 536 360 554 0.30
4 9 2 1.6e+04 -10.2 32.4 83 252 458 634 436 655 0.49
5 9 2 1.6e+04 -6.9 25.9 435 488 686 736 665 750 0.54
6 9 0.45 3.7e+03 -3.3 6.2 193 261 779 845 761 854 0.55
7 9 1.9 1.6e+04 -5.4 12.8 66 229 812 973 802 1010 0.59
8 9 0.18 1.5e+03 -2.0 7.0 100 213 941 1055 904 1098 0.47
9 9 0.15 1.2e+03 -1.8 0.2 65 117 1149 1198 1143 1246 0.66

Sequence Information

Coding Sequence
ATGGAAGATTATGAACGAATGGAAAGAAGAGAACGTGATAAACTTGCAAGACAGCAAGTACAAAATCCAGATCCTGAATTGCCATTGTTTTCAGCTCCCGTTAGGCTGAGTCCATCCGAAGGAGACTCTAGAATCCAATCAAAACTAGGAGATTATTCAATAGTTAAACGATTAATTGTCGAACCTAAACGTTTTATTGGTATAACAACACAAAGGCAATTACCACAATCACAACAACAGCAGCAACCAACAGTAATTGCTGGTTCTGGTTCGATAGCTAATACGGTAGCATCTGGTGCTACTGCACCAATAAATGCTTCAATACAACAACAAACTATAACTAATCGAAATCCTTCAATACATCATTACCATCAATCACATCAGCATCCACAACGAAATTCATATGTAAAACAAAATGACAATAAGCCTCCATATAATGGACGTGGTGGATATCCTGGTCAATCAATTAAACATGATATTCATACAAGTGGTATAGCACCCAATAAAGGTCCACCACCACCACAACAACAAACATCACAACCACCATTAATACAAAATGGAAGGATAATTGAGAAATTACCTATTCAACATATACCAAATGGACGTTTTCAAATGCCACCACCAAAACCTCCAAAATTTTTACATGATAACACAGAATCAACAAGCTCACATTCATTAAATTCTCTACCAGTTAATGGTGATGTTGAAAATATTCTTAAAGAGATGACTATGACAGCAAATTATACACCACTAACTGAGATTGCTGCAACGCCTCGTAAAGAGATGGAAAGTAAATTCACTTTCGGACAACCAAATCCTCATAAATATGCCGAACTACCTCCATTATTTAAACCTCCACTCAATAAACAAAGAGAAAAACTTCAACCTAAACCAACCGATTTAGAAAACGATCTGGACTTGTCTGAAAGTGATGACGAAAGAAAGAAGCAAACTGTTGATCCAAGATCACCTGTAAATGAAGCATCAAGTGAAAGTTCTGAATCAGCTTCTAGTGAATCTGGTAGCGAAGAATCAAATGGTACCAAAGGTGAATCATCAAGTCAAACTAGTAAATGGAATTTAAGTGAATTTTTTAAGCCGCCTCCAATGCAAAATGATGTAACACAACCATCATCTCAAGATAATGTTCGTCTTAATGAACATAAAATTAAAAATGAACCAATACCTGATGATTTTAATTCACCGCAAACATCTTATCGTAATTCCTTACCACCATTATTGACGACTGATATTAAAAAGGAAAATATACAAACAGATATGCATTTTCAGTCAATTTCAAAACAAAATCATGCCATCAACAATGGCCTGGAACTACAACCAAATCAAATTAAAAGTGAAGCATTCGTACAAAGTCCAGCTTCTAGCCCTGAAAAAGTTCAACATTCAGATAATGTAGAATCAGATCAAATCGAAAGTGTATTAGCAGAGGCAAAAAAATTAGCAGAAATTAAACCAGTATCAGAAATAGGAAGTAGCTCAGGTGAAGAAAAAAAGAAAAATTCTAGGAAAAAATCATCAATAAATAAAAAATCAGTTAAAAGAAGAAAAAAAGTTTCTAAAGATAAAACTGGTAGTGATTCAAGTGATGATGAAGAAGGTTTTTCAAGTACACATACGGCTGGTTCTGTTGGAAGCAGATCAAAATCTACTGATAAAGAAAAGAAGACTCGTGGCCGACCTAGAAAAGGTACAACAAATGGTAATTTAAGTACAACACCAGTTAAAATGTCAACACCAGGAAAGAAAAGTATTGCAAAAAAAGCAACAGTCAAAAGAAGAACATCAAGAAATAATTCAAATGCTAAGAGTCGTGAAATGTTAGATACAACAGAATCATCAAATGATAGTGATGAAAATTCACATTTAAAAACTTCTCAAACATCTAAGCCAGAACTTAGTGCCTGTAATAGTAGAATTTTATTACAAATACAAAAGCGTACACCAAACGAATCAAAATTTAATGGTGGTATAAATAATATTAATGGTGATAATTCATCGTTATCTTCATCAAATAGTGGAGATGATCGATTATCATCACCAGTTCCTGAAAAGAATTCGACAAGGCAGCAATACTCATCTCCTGCGCATAGATCTTCTGTAAGAAGTAAAATTTCAAGCTCTTCATCTTCGTCCAGTGATGATAATTCCGATAGTGATAGTGATGATTTACGAGAAGACAAAAAAATTCGTGATAAAACGAAAAGTGATAAAAATAAAAGTGATACCTTACGTAAGTTATTTGTTTTTGGCCTAAACAAAGGAGAAGGTGGAGCAAAAGGAAAAGGTCAAGTTGTTATAATTGATCAATCCGAAGAATTACAGAATGCTAAAGAACAATCTTCTCATCATGAAAAATTATTATCACCTATGGCCTTTAAACATAATAATGAAATTGCTCAAGGGAATAATAATAGCAATAGTAATATCCATCACACTAAATCACCAAGAAATTCAAATAATGTGATATCACAGGATAAAATTGTTAATAATAATTGTACATTATCATCATCAAAATTATCAATGATTAATAACAATAATAATAATCATAATCGTACACATAAAATAACAACACCATATTTTTGCCAAATTGATATATCACGATTAATTCGTATACATCCAGAATGGTATAATTCAACATATAGACTTCCTATACCAATTAATAGAGAACGAACAATAAATTCAAATTATAATTATAATAATGGTGATGATGAAAAACTAAGAACTAATTTATTAAAAAATAGTAAAATTAATCACAATTTAGTTAATCAAAACAATTTTAAAATTAATAATACAAATATTTGTAGTAGCAGTATTAGTACAAAAAATGCTACATTATCTAATTCAAACTCAAGACTGGTAACTGATACATTAGTAACAAATTTATCATCTAATATTGTAAATAATACTTCAATGTATAATCGTTTACATGAAAACTCTACTTCTGATATATGTGGTAAAACTATAGCAAACAATAGTTATCCTTATAATAATAACAATAATAATAACAATAATAATAATAATAATAATATAGATAATCGTTGTAAAGATAAAGAACAACTAAATATTCGTTTAACACCGAATAATATAAATGTATTACAACAATCACCATCATCACCAATTAAATCACTCGGTAATATTAAAAATGAAACAATTAAATCCGAATTTATATCAGATGATTATAAATATTTAACATCACTTAAAACAGCACCAGTATCAGTTGTAAATCAAAATGAAGATAAATATAATTTATATAATAATAAATTAAATAAAAATATAATTAAACAAGAAAATTTAGTTAAAAATGAATATAAAAATTTAATAATACCAACAATAGTAACAACAAGTGATTTTGATAGCAATAATAAACAGATACCATTAAATGTGATTACAAATAGTTGTGTACCAATTGGAAATATTGATATAACTAATAAAAATATTTCTAATGATAATTATATTCCAAAGAATTGTAAAAAACGTAGTTCAAGTTCAAGTAGCAGTCCATTTAAAGAAAAGAAACGGAAAAAAGGATCACTGTCACAAAACGAAATGATAGAACAAATGCCACCAACAAATCACGATCGGTTATCGGAAAGAATTTTATTACCTCCTCCACCGCAGCCAATTATTACTAAAGTTTATAGATCATATTTTGAACGTAACAATGATGATCTAAAGGAAGATTATGGGGACCATACACGCTTTTTAGACGAAGCAAAGCGCTTAAAACATGCAGCTGATAAAGAAACTGACCATTTTGACCAAGTTATGATTTACCTAAAAGCTGTCCTTTACTTTTTACTTGCCGGTGCTGCAATGGAACGTGATAAAAGAACTGAAAAAGCTGCATTTACTATGTACAAAGATACTCTTTCTTTAATTAAATTTATTTCATCAAAATTTCGTAATCAACAAAGTGCCGCAACGGTGCAGGGAGTTAATCATAATAAAGTTGCTATTCTAAGTTTACGTTGTCAATCATTAATTTCTTGTAAATTGTACAAAACGAAAAGACATGAAAGCAGAGAAGTATCTAAAATAGCTAGTGATTTTTTTAATAAGGGTTTAATTGATTTACCAAACGGTAATACACCCTCATCCATATCACCAACTAATTCAGTATGCTCTCAGGGTTCTGGTTCCAATACACCTCCTTGTCATATGGTTCCAATTCAGGTTCATGCTGCCCTACAAAGACAAAATTTATATTTTCACTATTTATCAAGTTCACATGATTTGTGGGAGCAAGCGGATGCTCTTGTTGAGAAGGGCAATCATACAGAATTTTTTATTGCGCTGGATCATGAAAATGGACCATTAACATTACATAGTTCAGTTTATGATTTATTTCGATATGTACAGGCGGGCCTACAGAAACTTAAGGACATGTAA
Protein Sequence
MEDYERMERRERDKLARQQVQNPDPELPLFSAPVRLSPSEGDSRIQSKLGDYSIVKRLIVEPKRFIGITTQRQLPQSQQQQQPTVIAGSGSIANTVASGATAPINASIQQQTITNRNPSIHHYHQSHQHPQRNSYVKQNDNKPPYNGRGGYPGQSIKHDIHTSGIAPNKGPPPPQQQTSQPPLIQNGRIIEKLPIQHIPNGRFQMPPPKPPKFLHDNTESTSSHSLNSLPVNGDVENILKEMTMTANYTPLTEIAATPRKEMESKFTFGQPNPHKYAELPPLFKPPLNKQREKLQPKPTDLENDLDLSESDDERKKQTVDPRSPVNEASSESSESASSESGSEESNGTKGESSSQTSKWNLSEFFKPPPMQNDVTQPSSQDNVRLNEHKIKNEPIPDDFNSPQTSYRNSLPPLLTTDIKKENIQTDMHFQSISKQNHAINNGLELQPNQIKSEAFVQSPASSPEKVQHSDNVESDQIESVLAEAKKLAEIKPVSEIGSSSGEEKKKNSRKKSSINKKSVKRRKKVSKDKTGSDSSDDEEGFSSTHTAGSVGSRSKSTDKEKKTRGRPRKGTTNGNLSTTPVKMSTPGKKSIAKKATVKRRTSRNNSNAKSREMLDTTESSNDSDENSHLKTSQTSKPELSACNSRILLQIQKRTPNESKFNGGINNINGDNSSLSSSNSGDDRLSSPVPEKNSTRQQYSSPAHRSSVRSKISSSSSSSSDDNSDSDSDDLREDKKIRDKTKSDKNKSDTLRKLFVFGLNKGEGGAKGKGQVVIIDQSEELQNAKEQSSHHEKLLSPMAFKHNNEIAQGNNNSNSNIHHTKSPRNSNNVISQDKIVNNNCTLSSSKLSMINNNNNNHNRTHKITTPYFCQIDISRLIRIHPEWYNSTYRLPIPINRERTINSNYNYNNGDDEKLRTNLLKNSKINHNLVNQNNFKINNTNICSSSISTKNATLSNSNSRLVTDTLVTNLSSNIVNNTSMYNRLHENSTSDICGKTIANNSYPYNNNNNNNNNNNNNNIDNRCKDKEQLNIRLTPNNINVLQQSPSSPIKSLGNIKNETIKSEFISDDYKYLTSLKTAPVSVVNQNEDKYNLYNNKLNKNIIKQENLVKNEYKNLIIPTIVTTSDFDSNNKQIPLNVITNSCVPIGNIDITNKNISNDNYIPKNCKKRSSSSSSSPFKEKKRKKGSLSQNEMIEQMPPTNHDRLSERILLPPPPQPIITKVYRSYFERNNDDLKEDYGDHTRFLDEAKRLKHAADKETDHFDQVMIYLKAVLYFLLAGAAMERDKRTEKAAFTMYKDTLSLIKFISSKFRNQQSAATVQGVNHNKVAILSLRCQSLISCKLYKTKRHESREVSKIASDFFNKGLIDLPNGNTPSSISPTNSVCSQGSGSNTPPCHMVPIQVHAALQRQNLYFHYLSSSHDLWEQADALVEKGNHTEFFIALDHENGPLTLHSSVYDLFRYVQAGLQKLKDM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-