Basic Information

Insect: Acrobasis repandana
Gene Symbol: clz9
Assembly: GCA_963576875.1
Location: OY756233.1:9753728-9756490[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.2e-07 9e-05 23.0 0.0 1 38 14 51 14 56 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.2e-07	9e-05	23.0	0.0	1	38	14	51	14	56	0.92

Sequence Information

Coding Sequence: ATGCCCCGAACTTACGTAAAAACAAAGATTAAAACCTACACTCCACAAAATTTAGCTGAAGCcatcgaaaaagaaaaaaatggcgAAATGACGCAATATAGTGCAGCGCAACAGTACAATATTCCCATGACGACTCTTTTTGATCACATTAAAGCAAGTGCAGGAAATCTCAGGCCAAATGCAGGTAGACCAACTGCTTTACCTTTAGAAGACGAAAACGAATTAGCCGAAACAATTACAGTCATGGAAAGATGGGGTTTTGGACTTTCAAGACTTGAAATAATGGAGATTGTCGCTGAATATGTGCGGCTGAATGAAATTCCAACGCCATTTAAAAACAATGTCCCAGGTGCAGACTGGTTCATTAATTTTCGGAAACGACATGGATTGTCTATCAAAAAAGCACAGTCTGTAGAATACGTGAGAAAAAAAATGACAGATCCTTTCGTCATTGCTGAATATTTTGATTTACtgcaaaatactttaaaagattTGAATCTCTTTGAAAGACCCCAGGCCATATGGAACTTGGATGAAACATCAATGTGCCTGGATCCAtccaaaacaaaagttgttggtaaaataaacaaaccttGTTCAAGAACAACTTACGGAAGTGGAAAGGAAAACACAACCGTGTTGGCAGGTGCAAACGCCAGCGGCAAGAAGTTGCCGCCTTTGATTGTTTTCAAAGGGAAAGATACTTGGGATACATGGATGGCTGAGCAAGACCCCGCTAAATACGATTTTCAAGTAGCTTATGCGACCAGTGCTAAAGGGTGGATggaaacaacaatttttttaaattatttcaaaaatgtacTCATCCCAAATCTGGGAGAAGAGCGACCGGTCCTTGTTATTTATGATGGTCACTCAACCCACGTCAATATAGGAGTTGTGCAGCTAGCAATCGAAAACAATATAACGATACTTAAACTACCGCCACATACGTCTCATTTGCTGCAGCCTCTAGACCTCGCAGTATTTAAGTCGTTCAAATCTATATGGGACGCCAAACTGGTAGAGTGGCAGCGTAGAAATGTTGGCacaaaaatgccaaaaaaaatcTTCTCGCAAACACTAGCAGATACTTGGCAACAAACAAGCCCCGATGTAATCAAAAGCGGGTTTAGAAAAGCTGGGATTTATCCATTCAATGCACAAGTGATACCCGTGGAAAAGTTTGATCCAGATGCATATAAAAGATACCAGAAAAAGATATCAGAAGCACATCGTGCCCCTGTAAGCCCAAAGTCACTCAGAGAAATTTGTACtgctttttgtataaatttgtttaacaaTCTTACGGTGACTTATGATGCTCTTGACAAGTCAAGCTCTGACAAAGTTACCTTGCTGTCTGAAATATCAAAGTCCAATGTCCAGACTTTGAGATTTGTAGCTAATCAGCCAACTCAATTACCCACATGTTTAAAGAATTCTAAGTCAATACAAAAttcaacaaaattaaacattatatcaaatcaaatcatcgTCAAAGCACCATTAAATCAACCCCAACCCCAACGATCATGCACATTTGAAGAACTGGTGCTAAGAAAAATCGAACAGGACAAAAAGGATACTACTTTGACAAAAAGGAAACGTGTTACTACAGGCGCTGAAGTAATAACTGCAACCATGGCtaaaaaaattttggaagaaaggGAAAAAACCAAAGGGACTAAAAAgctaacaaaaacaaataaaaatgattttaaaaaaggGACAAGAGTAACCAAAAACGAGAGttcaatcaacaaaaaaaatagaacagcACAAGCGCAAAAAGACCAGCCAGGCCCCTCAGGcataaataataagaagaaaagaaaacgcCAGCCTTCATTTGAAAGCATCACTAGTGTATCAGACATCATCAGCGACCACAGTGActctgatatttttgattgtgAAGAATCCATGGATGAATATTTTCAAGAAAACCAAGAAAcacaaaagtcacaaaataagaCAAAAGATGTGAAATACAGTAAAAGATATGAAAATTCAACAGATCTCAAGATACTGACTAACATAAATCCGAATCCCCTCTCTACTAAAGGTAAAGGTGTAGGCAAAAAAAGTAAAGGTAAAGAAAATAAAGCGAATAAAAACGACGAAGAAAAGGAACAGAAAAGTCATGAAAGTGATAACGAAGACGGCGTTGATCTTTTTATGAGAGGAAAAAATATGACTACAAGACAAGACTCAACAACAAATGACAAGGATGAGCCATTGCCACTAGAACATACAAGCATGGATATAGTTCAAGATGAACAAGAAGTGGACCTGGCCTTTAAGgaagtttacaaattaaatgataaagaaaatcaagtgaataacgaagacaaaaaaaaaccagataTACGACACATTGTAAGAGCTAACGGAGACGACATTGAAAAAGACCTGGAAAATAAAGACATAGTACACGAAATTCAAGAAGAGGACACTACCATGAAGGAAATTTACAAAGTGAATGATTCAGTGCTTGTCAGATATTTCATCAGAAAAAAATGGAGGTACTATATTGGGCTCATAGAAGCAGTAACAACAATGCATGAAGAAACGCGCTTTTCAATCAACTTCTTAAAAAAGATGAGATCACAGCAGCAGCTAACCTTcatgatgacaaaaaaaaaagatattgatGTAGTTACCGAGTCATTAATAGTGAAGAAGAtagatatacaaaaaaaagataatgAAAAACAGTATCACTTATGTAATGATGGAGATACAATTTATTTTGACTGA
Protein Sequence: MPRTYVKTKIKTYTPQNLAEAIEKEKNGEMTQYSAAQQYNIPMTTLFDHIKASAGNLRPNAGRPTALPLEDENELAETITVMERWGFGLSRLEIMEIVAEYVRLNEIPTPFKNNVPGADWFINFRKRHGLSIKKAQSVEYVRKKMTDPFVIAEYFDLLQNTLKDLNLFERPQAIWNLDETSMCLDPSKTKVVGKINKPCSRTTYGSGKENTTVLAGANASGKKLPPLIVFKGKDTWDTWMAEQDPAKYDFQVAYATSAKGWMETTIFLNYFKNVLIPNLGEERPVLVIYDGHSTHVNIGVVQLAIENNITILKLPPHTSHLLQPLDLAVFKSFKSIWDAKLVEWQRRNVGTKMPKKIFSQTLADTWQQTSPDVIKSGFRKAGIYPFNAQVIPVEKFDPDAYKRYQKKISEAHRAPVSPKSLREICTAFCINLFNNLTVTYDALDKSSSDKVTLLSEISKSNVQTLRFVANQPTQLPTCLKNSKSIQNSTKLNIISNQIIVKAPLNQPQPQRSCTFEELVLRKIEQDKKDTTLTKRKRVTTGAEVITATMAKKILEEREKTKGTKKLTKTNKNDFKKGTRVTKNESSINKKNRTAQAQKDQPGPSGINNKKKRKRQPSFESITSVSDIISDHSDSDIFDCEESMDEYFQENQETQKSQNKTKDVKYSKRYENSTDLKILTNINPNPLSTKGKGVGKKSKGKENKANKNDEEKEQKSHESDNEDGVDLFMRGKNMTTRQDSTTNDKDEPLPLEHTSMDIVQDEQEVDLAFKEVYKLNDKENQVNNEDKKKPDIRHIVRANGDDIEKDLENKDIVHEIQEEDTTMKEIYKVNDSVLVRYFIRKKWRYYIGLIEAVTTMHEETRFSINFLKKMRSQQQLTFMMTKKKDIDVVTESLIVKKIDIQKKDNEKQYHLCNDGDTIYFD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01403372; iTF_01403373; iTF_01403374; iTF_00011889; iTF_00011890; iTF_01302258; iTF_01302259; iTF_01302260; iTF_00012917; iTF_01302261; iTF_00012918; iTF_00012919; iTF_00012920; iTF_00011898; iTF_00011899; iTF_00011900; iTF_00011901;
90% Identity: iTF_01403372; iTF_01403373; iTF_01403374; iTF_00011889; iTF_00011890; iTF_01302258; iTF_01302259; iTF_01302260; iTF_00012917; iTF_01302261; iTF_00012918; iTF_00012919; iTF_00012920; iTF_00011898; iTF_00011899; iTF_00011900; iTF_00011901;
80% Identity: -