Basic Information

Insect: Acrobasis consociella
Gene Symbol: -
Assembly: GCA_963555685.1
Location: OY743106.1:7692831-7700097[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.017 1.4 10.4 2.9 1 23 84 107 84 107 0.98

2 19 6.5 5.5e+02 2.3 4.1 1 23 183 205 183 205 0.96

3 19 0.0038 0.32 12.5 0.7 2 23 211 232 210 232 0.97

4 19 0.09 7.6 8.1 3.4 2 22 499 519 498 519 0.95

5 19 4.3 3.7e+02 2.8 1.0 1 23 617 639 617 639 0.82

6 19 0.75 64 5.2 0.3 2 23 774 795 773 795 0.96

7 19 0.17 15 7.2 0.5 2 23 870 891 869 891 0.96

8 19 0.057 4.8 8.8 1.2 1 23 899 921 899 921 0.97

9 19 0.15 13 7.4 3.4 1 23 958 980 958 980 0.95

10 19 3.2e-05 0.0027 19.0 2.0 1 23 989 1011 989 1011 0.99

11 19 0.067 5.7 8.6 1.6 1 23 1093 1115 1093 1115 0.99

12 19 0.07 6 8.5 0.1 1 23 1171 1193 1171 1193 0.93

13 19 0.34 29 6.3 0.0 1 23 1199 1221 1199 1221 0.97

14 19 0.0051 0.43 12.1 0.4 1 23 1287 1309 1287 1309 0.93

15 19 0.018 1.5 10.3 1.1 1 23 1315 1337 1315 1337 0.96

16 19 0.0084 0.72 11.4 2.6 1 23 1426 1448 1426 1448 0.97

17 19 0.00021 0.018 16.4 1.4 1 23 1454 1476 1454 1476 0.99

18 19 0.39 33 6.1 2.1 1 23 1567 1589 1567 1589 0.96

19 19 0.0035 0.3 12.6 3.7 1 23 1600 1622 1600 1622 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.017	1.4	10.4	2.9	1	23	84	107	84	107	0.98
2	19	6.5	5.5e+02	2.3	4.1	1	23	183	205	183	205	0.96
3	19	0.0038	0.32	12.5	0.7	2	23	211	232	210	232	0.97
4	19	0.09	7.6	8.1	3.4	2	22	499	519	498	519	0.95
5	19	4.3	3.7e+02	2.8	1.0	1	23	617	639	617	639	0.82
6	19	0.75	64	5.2	0.3	2	23	774	795	773	795	0.96
7	19	0.17	15	7.2	0.5	2	23	870	891	869	891	0.96
8	19	0.057	4.8	8.8	1.2	1	23	899	921	899	921	0.97
9	19	0.15	13	7.4	3.4	1	23	958	980	958	980	0.95
10	19	3.2e-05	0.0027	19.0	2.0	1	23	989	1011	989	1011	0.99
11	19	0.067	5.7	8.6	1.6	1	23	1093	1115	1093	1115	0.99
12	19	0.07	6	8.5	0.1	1	23	1171	1193	1171	1193	0.93
13	19	0.34	29	6.3	0.0	1	23	1199	1221	1199	1221	0.97
14	19	0.0051	0.43	12.1	0.4	1	23	1287	1309	1287	1309	0.93
15	19	0.018	1.5	10.3	1.1	1	23	1315	1337	1315	1337	0.96
16	19	0.0084	0.72	11.4	2.6	1	23	1426	1448	1426	1448	0.97
17	19	0.00021	0.018	16.4	1.4	1	23	1454	1476	1454	1476	0.99
18	19	0.39	33	6.1	2.1	1	23	1567	1589	1567	1589	0.96
19	19	0.0035	0.3	12.6	3.7	1	23	1600	1622	1600	1622	0.98

Sequence Information

Coding Sequence: ATGCTCCAGCAGATGTCCTCGCAGCCGAGCGCACAAGTCGGCGAGGTCGCGTGTATCGTTCGCCCCTTCGAAGGTCGCTTGTATGGCGACGCCTCTTCGGAGGCCTCCTCCGACGCTGCAGAAGAACCCGACCTACCGCAGTGCAAAATAAGACGGAACTACAACTGCACCAAGTGCAAGTTTTATACGCAAAACCCGCGCGTATATCTTCTCCACGTTCGGGAAGTTCATTTTgaaagatttaaaatttatgtttgCCCATATTGTGTTTACGCATCCAGACACCATCAAAAACTTTTAAGACACTTGAAAATGGTCCACGACAACCGGGACTCAGCGGCCAAGTTGGAACCTGAACTGCCCCCCGCCATGTCAAACAGTGCTGAGCGCCAAGAACGTATAGAACGTGAGCGTATGGAACGTATGGAAGATCTCTTAGAAGAAGTAGAAGAATGCGATGACATAGAAATGGACACAGAAGACGGGCATGCCGACTCCGTGTATCGCTCCACTGAAGTCGAATCATCCAAGAATAAAGGAGAATACTTTAATTGTGATAAATGCAACTATGTGACGCATATAAAAGCGAGATTTACGAAGCATGTCAAATACCATTCAATTCCTAGGATCAAATGTAGTATTTGCGAATTTAGAACACCATACAAATGGAATCTGGACCGACACATGAagaaccacggaggcagcggCAGCTTCAACTGCTGCATGTGCAACTTTACGGCGGACATAAAGCAAAGTCTGACGGCGCATGAAATGAATCACCACAATCGGCCGATGGACCAGTCGGTGGGGAGACGCGGCCGCAATCGTGTGGGTGCCAGCGACGTGTTAGTCAGCGCGCCTGCTTCAGTCGTCCCCAAGGAGGACGAAGGGAGCGGCGACTCGCGTTCCTCGCATTCGGACATGATGGGACTGCAGTACATCGAGCGGGATACGATAAGTTGTAACAGCGACTCTAACGACGCGTCGACTTCCGACGTAGCTGCCAAAAAGTCGCAGTTGGCACAAAATGTGCAACATTCGCCCAATGCTTCAACGGACGACGCCAagagtcaaaaacaaaacagaaagATACCCCGACCAATACCACAGCTCATACCGCTAAATGCGTCCACCCCGAATCAGGCCAAATCCACCGGAGAGCCGCCctgcaaaaaatttaaagaaaatccaTCTAACGAGTCTAGTGACTCAAACTCCGATAGCAAACTTGATGGCCTACCGGCTGACATTACTCTTACTCCGGTATCTAATATGCCTACAAAGGAAAATATAGCGCGTAAGAAAAATGAGTCTTTCTTCGATAGATTAAAAGAAAGAATACTAACAGAAACTGGTGAAGAAGGATCATTGAATTGTAAAAATTGTGGATTCGTGAGCAAATGTCTCTCTGAACATTCAGtgcatgaaaaaaattgtactgctcAATTTAATAATGTCGCCAAGAATACATTACTACCGAATTTAAGCTCAACGCGATGCCAATACTGTAGACACAGATGCAAATCTAGTGCAGACCTGTATATACATATGCAGACATGTAGAAAGAATGAAAAAAAGGGAGATCAGTTAGTGGAAATGAAAAATCATGATAGTAATGAAACTTCTTCTTCAAACCAAGACCGAGATGCAGAGCCTCATCCAATGGaaaatgttgtttttgtttGGAACAACATAAACCACGATGCGAATAATTTCGAAACTCCACTTGGCATTAACATAAATGACGATTCTACTCTTCCGATTCCACACAAATCATTCGAAACTGAGATCGTAGACGACAATGAAAGCATGAACTTGTCGCCAAGCCAGGCGGTTGGAAAAAGAGTATTTAAATGTCCACACTGTCCGTTTTGGGCTTCAACAGCGTCAAGATTCCATGTTCACATAGTAGGCCATCTAAAcaagaaaccatttgaatgttcgcTCTGCAAGTATAAATCAAATTGGCGGTGGGACATCACTAAGCATATTAAACTAAAATCTGCCAGAGACCCAGAGCATAATGAAGCTAAAGTTTTGATGACCGACGAAACTGGAAGGAGAAACTACACAAAATATAGTAAATTTCTTGCTATGCCAGTTTTAAATGAATATGGTGAAAATGAGTTTCACTATGTTGATCAAAATGCGTCAGCCGATCCATCGATTGAAGGTCATGATTCTGTCAATGAAATTAATGACATGCACACCTCCTACGACATGCAACCGCTAAACTTGCAGACTCAGCATTTCCAGCAAAAATATGACTTGATGGATGGCAGAATGATTGATGCCAAAAAACCTAAGAAAACTTTATGGAAATGCAAAAAATGCAATTACAAAGACCCATCTAAAGAAGCATTATTGGAACATGTTCGAGAGCACGCTAAAGCAGACAGTGGCCCAGGCAATCAGCAAAACAAGAAACTAGAAAACCTACCAGATCCAGCAGATTTGGCATATCGCTGTGGACACTGCAATCAATTATCGAATTGGAAACATGTAATACAGAGACACTGCCGATTGAAGCATGATGGAATCATTAAGGTGATTACTACTATTAAGCCAAAACCAGAAACATCGTCCTCGTCTGAAATAACGAGCGATACATGCACAAAGTGTCCATTTAGATCCACTGATAGAAAAGTGCTCGTGGCGCATTTACAGCAACATCAGCCTACTCCTGActcaatatttaaatgttacttCTGTCCGTTCTTTGTCAAAGATGAAAAAGAATTAACCCAGCATCTGCTGCTGCACGGAATTACAGAACCAGAAGAATATATCGCAAAAGCTATGGGAAGTAGGTCGCCCTTGCCAGATCCTGTCATCTTGCCCGGACCATCAGGCTTGTCGGGCACCAAACGACACAAGTGCACAGAATGCCCCTACGAAACAAACAGTAAATCACAGTACATGTATCATGAACAGTTTCATCGCGCTCCAAATGAAACTCGAGAATACAAATGCCCGGAATGTAATTACAGCGTTTCTAAAAGGCATTTACTTAATCAGCACCTGAGAGTGCACGGAATCATTATGAAGAAATCAGAATCTGAAGCAGAATTAGAAGCTATGGTATCTGATactaataaaatagaaaagttGGCTGATATACCAGTTCTGGAAGAAATACCATATGTGTGGGTATCAGCCAAAAATGAATTCCACAAAATGTACAAATGCCGATTTTGTTCATACGTGAATTCTCAGAAATGCAAAATTCCGAATCATGAAAAAATCCACTGCATAGAAAACAGCGAAATAACCGTTTACAAATGTTGGGAATGCAAATTCACGTGTGACAACGCAGGAAGATTAGCGGAACATTCCAAAACCCATGGTGAAATCTACGGCCGAATCTATTGTCCTGTCGAACCTGACGTGCCTGATGAAGAACAAATTGCAAAACTACGTAAAGTAATCGAGGTTGAAAAAACAAATACTCCAGAAGAGTCTCAAAAGGAGGAAATGCTAACAAGTGAGAACAAAGAAGTGAAGATCTTGTACTTCTGCCAGGAATGTCCGTCCAGATTCTTTACAGAAGATGAATTGTCTGCTCACGAAATAGGCCATAAAGAAACCTTttgttataaatgtaaaagttgtgAATTTTCTGTTGCTGAAGAAGAAGACTTGGAAGCTCATGCGACTGTTCATTCAGACGAATATCAcactaaaacaaaaatgttaaagTTTATACATAACGCGCATCCAGCTCACATTCAACCTCGATTGGAACTTGTCCACTGTCCAATAACTTCTGAAATTACTTGGATTGTGTCGACATCGAGCAAAAACTATGACGAGAGTAGCATTAGAAAGTCATGTGACACCAAGCACGCGCCCAAGCAGTATCTTTGCAAAGAATGTCCagcgaaatttttcaaaagttcAGCTCTCACTTATCACATGGGCCTTCACGGGAGTGATGGCGAACATAAGtgtaaaaaatgtagttacGCTGTTAAGAACATAGGTAACTTGGCTAAACATGAATTACTACATGAAAACGAGAATAAACAGCCTGGTGACTACGATTCCGGTGATGATATggactataaaaatataccacTGTCAGGAACAGACTTGTTTCAAAGGAAAACTGAAGCTCAAAAGCGCGTATTAACCGATAAGGATAAACTTGTAAAGCCTAACGATCATTTCCCGCCAGTACTACAAGCCGACCCACAATTTGGCTATCTGATGCACGGTAATCCTGAATTTATATATCCCACTTACCTCAAGAACGgaagacaaaaagaaaaacgTTACAAGTGCCATAAGTGTCCTTCTGCTTTTGAAAAACGAGAACAATATAAGATACACTTGTCACTGCATGGATCCAAGCAAAGATATAAATGCGAGCTGTGCGATTACTCAGTAAAGTACTACGCAAATTACGTGCAACACATGAGAAAACATCAAATGAATGATGAGGCTCAAGCCGAGAGAAAAAAAGGCAATAACGGTTTTACAGAAACAGAAGTCCAAGAAACTAAACTAGACGATAGTGGTGATAATATAAAACTAGCAATTAAAACAATGCCGAGGGGAGCGGCCAAGAGCGACTTCCAGCAATTCTCGATCAGCGATCAGCAAACCCTCCGCCTGCTTCAAAGAAGACGTTCCATAAATAGCGCTGGAAAGGATCCAAACGCAACTGAAACGTCGCCGCCTTCCAACCGAAAATTGCACATGTGCTTATTATGCCCGTACACAAATCAGCGACAGGACGCTTTGACAAACCATTACAGGAGGCACGATGACACAGACGTTCTCAGTGCAGGGACTCACAAATGCTCTTACTGTGACTTAGTGGTTGTACAATCACATTTCCTTCGTGAACATCTCAAAACTCATTTCAGTTATCAGAAAACACTAACTGCGGAGTGTTACGTAGCCAACAAAGATGTGAGCTTTACTATAACTCAAATAGACGACGAAAACTTGTCTACAGATCTCAAGTTAGATATACGAAACCAGAAATACACATGTAACGAAGATAAAatgtatgttaaaataaaaactggaGAACTTATGGTAGAGTAA
Protein Sequence: MLQQMSSQPSAQVGEVACIVRPFEGRLYGDASSEASSDAAEEPDLPQCKIRRNYNCTKCKFYTQNPRVYLLHVREVHFERFKIYVCPYCVYASRHHQKLLRHLKMVHDNRDSAAKLEPELPPAMSNSAERQERIERERMERMEDLLEEVEECDDIEMDTEDGHADSVYRSTEVESSKNKGEYFNCDKCNYVTHIKARFTKHVKYHSIPRIKCSICEFRTPYKWNLDRHMKNHGGSGSFNCCMCNFTADIKQSLTAHEMNHHNRPMDQSVGRRGRNRVGASDVLVSAPASVVPKEDEGSGDSRSSHSDMMGLQYIERDTISCNSDSNDASTSDVAAKKSQLAQNVQHSPNASTDDAKSQKQNRKIPRPIPQLIPLNASTPNQAKSTGEPPCKKFKENPSNESSDSNSDSKLDGLPADITLTPVSNMPTKENIARKKNESFFDRLKERILTETGEEGSLNCKNCGFVSKCLSEHSVHEKNCTAQFNNVAKNTLLPNLSSTRCQYCRHRCKSSADLYIHMQTCRKNEKKGDQLVEMKNHDSNETSSSNQDRDAEPHPMENVVFVWNNINHDANNFETPLGININDDSTLPIPHKSFETEIVDDNESMNLSPSQAVGKRVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYTKYSKFLAMPVLNEYGENEFHYVDQNASADPSIEGHDSVNEINDMHTSYDMQPLNLQTQHFQQKYDLMDGRMIDAKKPKKTLWKCKKCNYKDPSKEALLEHVREHAKADSGPGNQQNKKLENLPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTIKPKPETSSSSEITSDTCTKCPFRSTDRKVLVAHLQQHQPTPDSIFKCYFCPFFVKDEKELTQHLLLHGITEPEEYIAKAMGSRSPLPDPVILPGPSGLSGTKRHKCTECPYETNSKSQYMYHEQFHRAPNETREYKCPECNYSVSKRHLLNQHLRVHGIIMKKSESEAELEAMVSDTNKIEKLADIPVLEEIPYVWVSAKNEFHKMYKCRFCSYVNSQKCKIPNHEKIHCIENSEITVYKCWECKFTCDNAGRLAEHSKTHGEIYGRIYCPVEPDVPDEEQIAKLRKVIEVEKTNTPEESQKEEMLTSENKEVKILYFCQECPSRFFTEDELSAHEIGHKETFCYKCKSCEFSVAEEEDLEAHATVHSDEYHTKTKMLKFIHNAHPAHIQPRLELVHCPITSEITWIVSTSSKNYDESSIRKSCDTKHAPKQYLCKECPAKFFKSSALTYHMGLHGSDGEHKCKKCSYAVKNIGNLAKHELLHENENKQPGDYDSGDDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGNNGFTETEVQETKLDDSGDNIKLAIKTMPRGAAKSDFQQFSISDQQTLRLLQRRRSINSAGKDPNATETSPPSNRKLHMCLLCPYTNQRQDALTNHYRRHDDTDVLSAGTHKCSYCDLVVVQSHFLREHLKTHFSYQKTLTAECYVANKDVSFTITQIDDENLSTDLKLDIRNQKYTCNEDKMYVKIKTGELMVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00720882;
90% Identity: iTF_00013595;
80% Identity: -