Basic Information

Insect: Acrobasis consociella
Gene Symbol: -
Assembly: GCA_963555685.1
Location: OY743118.1:9316175-9335707[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0005 0.043 15.2 0.2 2 23 138 159 137 159 0.93

2 10 0.00073 0.062 14.7 2.4 1 23 165 187 165 187 0.96

3 10 8.9e-05 0.0075 17.6 0.3 1 23 284 306 284 306 0.98

4 10 0.00076 0.065 14.7 0.0 3 23 386 407 384 407 0.90

5 10 0.0026 0.22 13.0 0.4 1 23 422 444 422 444 0.94

6 10 3.1e-06 0.00027 22.2 0.2 1 23 474 496 474 496 0.98

7 10 0.00078 0.066 14.6 0.2 1 23 502 524 502 524 0.97

8 10 0.00044 0.037 15.4 0.3 1 23 530 552 530 553 0.95

9 10 2.6 2.2e+02 3.6 0.3 1 23 566 588 566 588 0.94

10 10 0.1 8.5 8.0 0.0 1 20 741 760 741 763 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0005	0.043	15.2	0.2	2	23	138	159	137	159	0.93
2	10	0.00073	0.062	14.7	2.4	1	23	165	187	165	187	0.96
3	10	8.9e-05	0.0075	17.6	0.3	1	23	284	306	284	306	0.98
4	10	0.00076	0.065	14.7	0.0	3	23	386	407	384	407	0.90
5	10	0.0026	0.22	13.0	0.4	1	23	422	444	422	444	0.94
6	10	3.1e-06	0.00027	22.2	0.2	1	23	474	496	474	496	0.98
7	10	0.00078	0.066	14.6	0.2	1	23	502	524	502	524	0.97
8	10	0.00044	0.037	15.4	0.3	1	23	530	552	530	553	0.95
9	10	2.6	2.2e+02	3.6	0.3	1	23	566	588	566	588	0.94
10	10	0.1	8.5	8.0	0.0	1	20	741	760	741	763	0.93

Sequence Information

Coding Sequence: ATGGACGGGGATGGCGGCGACTTCAGCCTCCACTGGGAGGTTGATGATGTGAAGcaaGAAACTGTGGTGAAATCagaacaaggaatacttgagaATATGGAAGGCGCACAGTACTCAACAATGacaTCAGAAGAAATGATCGAAAATACTGACCAAATGGCAGCAGAGAATCTGATGTACTTATCACAGGATATGATGGGCTATACAGAGATGGCTGAAATTGATCCAAATGTTGAATGTGTCACCGAAGAGGTCATCACAGATGACTGGGTCATAGCTGGAGGACAGGACagGGTGGAAGTTCCAATGGAGCATTTGGCAAACCCTGTGTCAAACTCTGTTGAGGAGAATAACATGGATGATGTCCCCCTTCCAACTGATCAAGATGAGTACACCGCAATGCGACCTTGGCCATGCGACTTCTGCTCGCGGCGGTTTCGCAAGAAGGCCGCCCTGATGAACCACATGGTGGCGCACCAGAACGACCGGCCGCACGCCTGCAACCTGTGCGGCGTGCGCTACGTGCGCAAGTGCGACCTCATGAACCACCTCAAGGTGCACGCCTACGTGCCCGACTCACACGACCCCGTTGACTATGAATTGCTAGAGGAAGACAGAGTTATTAAGCCAAAGAAAAAGAGAGGACGGCGGAAAAAGAACCCAGACCCAGTTGAAGAGAATGGCACCTGGGAGAACATGACGTCGGCGCGCACGCAGCAGTGGTCGCGGCGGCGCTCGGGCGCCGTGCGCACAGGAGCCCCGCCCCCCGCGTCGCCGCCGCCGCCCCCCACACCGCCCTCGCCTCCCTCGCCGCCCACCCCGCCGCCTCCTGCCGACCCCTCGCGCCCCTTCGTGTGCAGACACTGCGGCGTTGGGTTTGCCAGGGAGAAAGCGCTGCAGTCACACGCTAGGATCCACGGCGGCGACTCCCCCATCGAGTGCGGGGAGTGCGGCGAGCTGTGCTGGTCGCGCGAGGCGCTGGCGGCGCACGCGTCGCAGCGGCACCCGCACCTACCGCCGCGCTCGCGGCAGCCCGACCCCGCCTACGGAGACTCCGATTCAGACGACGACATGGAGTACCAGCTGTCGCCGCTGGCGCACAGCGCGGGCTCGGAGCGGCCGGCGTACGAGGCGGTGCGCGGGCCGGAGCTGTTCTGCCAGGACTGCGGCGTGGCCTTCCAGCGCGCCGACCTGCTGCGCCGGCACGTCGCCGCCGCGCACAGCTACAAGCGGCACGACAGCACGAGCAGCACGTGGGGCGAGCACACGTGCGACGTGTGCGGCGAGACGTGCACGGACGCGCTGCAGCTGCTCGCGCACGCAGAGCTGCACGCCGAGCGACCCAGGGCCGCGCCTGCGCCCAGGTTAAAAAAGATGTCTCGAGGCAGGAATAGCACGTCGTCAAATAACTTACGGCAGTTCCCCTGTAAAGAATGTgGCAAAGTGTTCGGGTCGCGGAGCTCGCAGCAGATCCACATCCGCATCCACACGGGCGAGCGGCCGTACGCGTGCCGGTTCTGCTGGAAGGCGTTCGCGGACGGCGGCACGCTGCGCAAGCACGAGCGGATACACACCGGCGAGAAGCCGTACGCGTGCGCGGTGTGCCCGCGCGCGTTCAACCAGCGCGTGGTGCTGCGCGAGCACGTGCGCTCGCACCACTCCGCGCCCGACCGCCGCGCCAACGGTGGTCCGTCCTACTGCTGCGTGGTGTGTGAACAGACACTGTTATCAAGCGCAGAGCTGGTGCAGCATCTGATTCAGCACTGTGACGTCAACACGGCTCTCAAGCGACAGCCGCAGTCGGGGCCGCGCAAGTACAAGCGGCGGCGGAAAATAAAGTCGGAGCGGTGGGAGCGGTCGCCGTCCCGCTCTCCGTCGCGGTCACCGCCGGGCGCGGCGCGCTCGCCCTCGGCGTCGCCGGCCGCGTCCCCCCCGCGTGCCGCTTCGCCGcccccgcgccgccgccgccgcccgcgcgccccgccgccgccgcgcccgcgcatGATACACACCGAGGAACCCAGGCCACGTACCAAGCAAATTCGGTCTCGACGACCGCCACGGCATCCGGCCGACGATCTGCGAGCCATCCGAACGCAGCCGCAGCTGCCGAGCCGCTCGCCGACTCCCGAACCGAAACTAGAACCAAAGACAGAGGCCGACATGCAGCCCAAGCATGAACAGAGCCCATCGCCGGCGACCAGCGAAGCTGAAACGCCCTATAAATGTGAAATGTGCTCACTAGAGTTCCCCGGGCGCGATGCCTTGTTGCTGCACGTGCCGGTGCATATCTGA
Protein Sequence: MDGDGGDFSLHWEVDDVKQETVVKSEQGILENMEGAQYSTMTSEEMIENTDQMAAENLMYLSQDMMGYTEMAEIDPNVECVTEEVITDDWVIAGGQDRVEVPMEHLANPVSNSVEENNMDDVPLPTDQDEYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHACNLCGVRYVRKCDLMNHLKVHAYVPDSHDPVDYELLEEDRVIKPKKKRGRRKKNPDPVEENGTWENMTSARTQQWSRRRSGAVRTGAPPPASPPPPPTPPSPPSPPTPPPPADPSRPFVCRHCGVGFAREKALQSHARIHGGDSPIECGECGELCWSREALAAHASQRHPHLPPRSRQPDPAYGDSDSDDDMEYQLSPLAHSAGSERPAYEAVRGPELFCQDCGVAFQRADLLRRHVAAAHSYKRHDSTSSTWGEHTCDVCGETCTDALQLLAHAELHAERPRAAPAPRLKKMSRGRNSTSSNNLRQFPCKECGKVFGSRSSQQIHIRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRANGGPSYCCVVCEQTLLSSAELVQHLIQHCDVNTALKRQPQSGPRKYKRRRKIKSERWERSPSRSPSRSPPGAARSPSASPAASPPRAASPPPRRRRRPRAPPPPRPRMIHTEEPRPRTKQIRSRRPPRHPADDLRAIRTQPQLPSRSPTPEPKLEPKTEADMQPKHEQSPSPATSEAETPYKCEMCSLEFPGRDALLLHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00073095;
90% Identity: iTF_00013363;
80% Identity: -