Basic Information

Insect: Acrobasis consociella
Gene Symbol: Zfa
Assembly: GCA_963555685.1
Location: OY743104.1:30995955-31008444[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.003 0.25 12.8 1.0 1 23 243 265 243 265 0.99

2 11 0.27 23 6.6 1.1 1 23 272 294 272 294 0.97

3 11 4.1 3.5e+02 2.9 0.7 1 9 298 306 298 318 0.90

4 11 8.9e-05 0.0076 17.6 4.7 1 23 328 351 328 351 0.92

5 11 0.0052 0.44 12.0 0.3 3 23 359 380 358 380 0.97

6 11 7.4e-06 0.00063 21.0 0.1 1 23 393 415 393 415 0.97

7 11 8.7e-05 0.0074 17.6 1.3 1 22 421 442 421 446 0.92

8 11 3.4e-05 0.0029 18.9 4.3 1 23 454 477 454 477 0.97

9 11 0.0045 0.38 12.2 0.1 1 23 483 506 483 506 0.96

10 11 6.6e-06 0.00056 21.2 0.3 1 23 515 537 515 537 0.98

11 11 0.0012 0.1 14.0 0.2 1 23 543 566 543 566 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.003	0.25	12.8	1.0	1	23	243	265	243	265	0.99
2	11	0.27	23	6.6	1.1	1	23	272	294	272	294	0.97
3	11	4.1	3.5e+02	2.9	0.7	1	9	298	306	298	318	0.90
4	11	8.9e-05	0.0076	17.6	4.7	1	23	328	351	328	351	0.92
5	11	0.0052	0.44	12.0	0.3	3	23	359	380	358	380	0.97
6	11	7.4e-06	0.00063	21.0	0.1	1	23	393	415	393	415	0.97
7	11	8.7e-05	0.0074	17.6	1.3	1	22	421	442	421	446	0.92
8	11	3.4e-05	0.0029	18.9	4.3	1	23	454	477	454	477	0.97
9	11	0.0045	0.38	12.2	0.1	1	23	483	506	483	506	0.96
10	11	6.6e-06	0.00056	21.2	0.3	1	23	515	537	515	537	0.98
11	11	0.0012	0.1	14.0	0.2	1	23	543	566	543	566	0.94

Sequence Information

Coding Sequence: ATGGCGGAACAgtctaaaactaaaaatcttTGTTGCCTGGGCTGTTTGGCCTCTAGCCAGGACCTCCAGTTGGAAATGATCACCTTCCAAAATGAAACTTTAAAATCTGTATTACAGatggAGGATGTCTGCCTGTGTTATTTATGCAAGAGGATGGCTCAGCATGTGGAGCTGTTCATACAGAACGTTCAGAGCAATCAGATCCTGTTggagaattttaatattGACACAGATTCTACCTTCGAAATAGTACGCTCACAAACCCAACCATTAATCAGACTGACCCTCCTGCCATTAGACATCATAGAACTGAATGGCATAGACCTGGTGAATGGAGAAGAATGCTTCTCTATTGTGCCCAGTTCGAAAAAGGATGTGAAGATCAAACTTGAACCCATGAAGGAAGAAGATGAACTACTGGACCATTTGGAGGGAGAGTTTGTTGATGATGACTCAGatTTCCAGGCTCGATTTGTTAAAGAAGAGGATGACTACCCTTTAAAAGAGCTATTAAAAGCAGAAATAGAAAACGGCATAAATTCTAAGTGTAGACAGAGATCtttcaaaaaattgaaaatcaaGAAAAAGAAAGTGAAAAGAGAGGTTGATAACAAAGTTTTACAGAAAGACCTTTCTACAGTAAAACAGATTATCATAACAAGAGAACAGTGCATGAAAGAGAGGGAGATAAGGCAGCAGACAGATAAAAAGTATCTAAACGCCACATACAAATGTGCGGACTGTATAAAAGGATTCACGTTTAAAGCGAGCTATGATAAACACATGGAAAAACATAGTGAGAGTATGGGTGACTACGAATGTGACATTTGTaagcaaagaaaaaatacaGAGGAAAAGCTATTAGCACATAAAAAGTATCACGAAATCCGCTACCAGTGTACCGAATGCGACCACACCAGAGTGTGCAGAGCTACTATAATAGACCACTACGCTGCGTTCCACTGTTTCGACTTCTTGCAGCATATATGCTCTTATTGCTCCAAGCAGTTCAAGCGCAAAGGATCTTTAAGAAAACACATCTTCAATCGACacagagagaaagagagagtgTTGTGTGTGTATTGCAGCAAGACCTACGCCAGTATGGAGGTTCTTAAGTCGCATATGATCacGAGACATCCGAGCGAAGTATCAGCCGAAAAGAGAAGtaagaaatttgtatgccaaGAGTGCGGCATGGCGTTCGGTTCGCCGTCGCAGCTCAAAAAGCACGGGCTCAAGCATTCTGACGTCAAAGAACATTACTGCGTGGAGTGTGACAAGAGTTTCAAGACTGAAGACACATTAAAATATCACCTGACAACAACAGCCATTCACGTCAACTACACAGAGTTAAGGTATCCGTGCCTGCACTGCGATAAGCGATTTGGAACTAAACGCAACCTTGAGCACCACACTAATAGAATTCATCTCAAAGTTAAACCGTTCCCTTGCGATAGTTGTGAAAAGGCATACGTGAGTAACTGGGCATTGTCAGAACACAAGCGACTCATACACGAAGGGTACAAGCGGCCGCTCAGGTTTCCCTGTCCGATGTGTGACAGAGTTTTTAATCGCAACCAGATTCTAAAAGCGCATCTGCGCACTCACACCGGGGAGAGACCGTACCAGTGCTCAAAGTGTCCGGCTTCTTTCGGACAGTCCAGTGCTTTAGGAACACACAACAAATTGATACACCTCAGGCTTACGAGAGACGGGAAACCCAAAAGTAGCGTCAAGTAG
Protein Sequence: MAEQSKTKNLCCLGCLASSQDLQLEMITFQNETLKSVLQMEDVCLCYLCKRMAQHVELFIQNVQSNQILLENFNIDTDSTFEIVRSQTQPLIRLTLLPLDIIELNGIDLVNGEECFSIVPSSKKDVKIKLEPMKEEDELLDHLEGEFVDDDSDFQARFVKEEDDYPLKELLKAEIENGINSKCRQRSFKKLKIKKKKVKREVDNKVLQKDLSTVKQIIITREQCMKEREIRQQTDKKYLNATYKCADCIKGFTFKASYDKHMEKHSESMGDYECDICKQRKNTEEKLLAHKKYHEIRYQCTECDHTRVCRATIIDHYAAFHCFDFLQHICSYCSKQFKRKGSLRKHIFNRHREKERVLCVYCSKTYASMEVLKSHMITRHPSEVSAEKRSKKFVCQECGMAFGSPSQLKKHGLKHSDVKEHYCVECDKSFKTEDTLKYHLTTTAIHVNYTELRYPCLHCDKRFGTKRNLEHHTNRIHLKVKPFPCDSCEKAYVSNWALSEHKRLIHEGYKRPLRFPCPMCDRVFNRNQILKAHLRTHTGERPYQCSKCPASFGQSSALGTHNKLIHLRLTRDGKPKSSVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00013348;
90% Identity: iTF_00013348;
80% Identity: -