Basic Information

Insect: Acrobasis consociella
Gene Symbol: -
Assembly: GCA_963555685.1
Location: OY743129.1:5859626-5879624[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.033 2.8 9.5 0.0 3 23 140 160 138 160 0.96

2 15 0.0024 0.2 13.1 3.1 1 23 286 308 286 308 0.99

3 15 4.2e-05 0.0036 18.6 0.3 1 23 314 337 314 337 0.96

4 15 0.22 19 6.9 7.0 1 23 342 365 342 365 0.94

5 15 0.00044 0.037 15.4 1.0 2 23 558 579 557 579 0.97

6 15 6.5e-05 0.0056 18.0 2.6 1 23 585 607 585 607 0.99

7 15 1.3 1.1e+02 4.5 8.3 1 23 671 693 671 693 0.97

8 15 1.4 1.2e+02 4.3 0.5 1 23 700 722 700 722 0.91

9 15 0.0016 0.14 13.6 1.5 1 23 728 750 728 750 0.98

10 15 0.0013 0.11 13.9 3.1 1 23 756 778 756 778 0.98

11 15 0.018 1.5 10.4 4.1 1 23 787 809 787 809 0.98

12 15 0.00067 0.057 14.8 0.6 3 23 857 877 856 877 0.97

13 15 0.042 3.5 9.2 5.9 1 23 894 916 894 916 0.95

14 15 3.3e-06 0.00028 22.1 0.7 1 23 922 944 922 944 0.98

15 15 0.0008 0.068 14.6 6.5 1 23 950 973 950 973 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.033	2.8	9.5	0.0	3	23	140	160	138	160	0.96
2	15	0.0024	0.2	13.1	3.1	1	23	286	308	286	308	0.99
3	15	4.2e-05	0.0036	18.6	0.3	1	23	314	337	314	337	0.96
4	15	0.22	19	6.9	7.0	1	23	342	365	342	365	0.94
5	15	0.00044	0.037	15.4	1.0	2	23	558	579	557	579	0.97
6	15	6.5e-05	0.0056	18.0	2.6	1	23	585	607	585	607	0.99
7	15	1.3	1.1e+02	4.5	8.3	1	23	671	693	671	693	0.97
8	15	1.4	1.2e+02	4.3	0.5	1	23	700	722	700	722	0.91
9	15	0.0016	0.14	13.6	1.5	1	23	728	750	728	750	0.98
10	15	0.0013	0.11	13.9	3.1	1	23	756	778	756	778	0.98
11	15	0.018	1.5	10.4	4.1	1	23	787	809	787	809	0.98
12	15	0.00067	0.057	14.8	0.6	3	23	857	877	856	877	0.97
13	15	0.042	3.5	9.2	5.9	1	23	894	916	894	916	0.95
14	15	3.3e-06	0.00028	22.1	0.7	1	23	922	944	922	944	0.98
15	15	0.0008	0.068	14.6	6.5	1	23	950	973	950	973	0.98

Sequence Information

Coding Sequence: atgaatataaatattgaaGTGGACCCGTTAAGTAATTACGAGTATCCGTACGACTACAACACACACCCAAACCCTTACGGCAACGTTCAACCCGTCAAGCAAGAACAACCCATGATCAACAATGCATTTTTCCAGCATTTCATGGACATCTCTTACAGAAATAACGATAAACAATATCTTATCAATCCAAACCAATACCAAGAAAAGCAGTATACAGATCTTCACGCAGGCGGAAACATAAATAATGGAAATGTGAGTAACGAAAATAGTAATAACGATCTGCAAAATCCTCCTCCTATACCAAAAGAGGAGGACGTCAAACCGCTTATAAATCCAAAGAATATCAAAAAAGAGAAGGGTAGGAAAAGCAGCTACTTTTCAGAGAAAATTTTAGATAAAGATTTCAAGTTTTTTGGTTGTTCAGTGTGCGACATCAGTTTTGCACTACAAGGCGAGTTAGACCAACATGTTACTATACATAAAGATAGAATAACAAGCTAtgacttgaaaataaaaaatcagaagaagaggaaaaacatgaaaaaagagcaaaaaaagaagaaaaagttaCAAAAGGATGTAAAAGTTGAAGGTAAAAAGGATACTGTGTTTGAAATAGAAATCAAACCAGAAGATGGCTATATAGGTAACGAAAAAGCCtcagaatttaatgaaaataatggaaacaaaaatgaaaataatgaaaatgattCTACGAATAACGGAAACACTCCTAACGTAGATAACGATTCTAAAACAGATGTAAAAGAGGTGAAAGAGAAATTAGAAGAGAAATTGGAAAATGCAAAAGCTAAAGAACAAACGGATgcagaaaaaaacaatttagaaAAGATATACAAATGCTTTGCATGCAAGAAACAGTTTTCTTTGAGTTACTATTTGAAACTACACGTCAGGTCACATACAGATGAGAAGCCCTACCCGTGCAATGTCTGCGGACAGTCTTTCATCACAGCAAGCAAACTCGGGAGACACAACAAGCGTATGCACCTCTCTGTGCGGTACCAGTGTCGCATTTGCTATAGATTCTTCTCCAAATTCGAATGTCTAACGCGACATTTCGACAAGAAACATCCAGACGACAAGTTGGAAGGTGAACCTTATGATTTCAACGCCATCTTACCCTACCTGAAAGAACTGGAAGAGCAATTGAAAGAAAAAGCAGAAGAAGCTACGAAGACCAAATCCGAGGATCTATGGGACGGCTGGCCGGCGCCCATAGACAACGGGCTGACCACAGACAAGACAGAGGATGCGCTTGACAGGTCTATGGAGCCTGATGAAAAACCAGTCGAGGTTCTAGTGCATGAAGACATGGGGCATGTTGTGATtaaaaaggaagaggaagaagaGCCGTACCCCGAATTCGCGGCGGTGAAGGATAGCGATAGCTTGAAGAGTGAAAAGGAAGATGTCTACTCGAGCCACTTCGGTGACTACAGGGACGATGACGACAAAGATGGCGGCTTTGGGGGGGAGGTGAAAGGTGACAGCGTAGGGGGGGTGAAAGACGACCGGTTCAAGACTGAGGAAGATGATGGGAACATATCAGACGATAACTACTTCCCCTCCGGAACCTGGGTGCCCCCCACCCCAAAAGTGGAAATAGACGACAAGCCGAAACGCCGGAAAAAGTCGGACCCTCCCCTTAAATGTGACATTTGCAACAAGAAGATCAGCACAATAACGTACATGCGGATTCATATGAGAACCCACACCGGAGAAAAGCCCTTTAAGTGTTATATATGTGAACGTGGCTTTATAACTTCGAGTAAACTTCATAGGCATGTTTTGACGCACGCTGAAGCTTGGGAAGGAAATCTAAataCCGAAGTGAAGGGAGAACTTGAAACAGACATAAAAGACGAGGAAGGTTCggacaagaagaagaaaaacaagAAAACAGACAAAAATATCAGAGCGAAACGCGCCAAAGCGGAATTTGTGGCGAAAACCAAAAGCGAGGCGAAGAAGAGCAGGAGATGGCAACACACGTGCCAGTTCTGTCACCGGAAGTTCCTGCACGCGGAGACGTTGCAGGTCCACAAAAAGAGCCACGAAGGCGAAGAGCTCGTGTACAAGTGTCACTACTGCCTCGAACCCCAGCCCGACGAGGCCACGCTCCTCCAGCACGAGACTACGCACACGGGGCCCTCGCCCTACCAGTGCGTCGAGTGCGGGAAGAAGTATAGGAAGAGGGAAGCCATGATATACCACAAAAAGCAACACTCGTCCGACAAGATGTTCTACTGCGAGGTGTGCCTCAAGTCGTTCACGGCGCAGTGCAAGCTGCAGCGACATCTTCTCAGCCACAGCGAGAAGAAGTACGTGCTCCGGTACGAGTGCCCCGTGTGCGCGCACATGTTCCACACGAAATACCACATACAGATGCATCTGGCGACGCATCAGAAGGAGGGGCTGATACAAGAAGAAAACCGAAATGACATACTCGCAATGGTGCTACAAAACGCCCGCAAGTTCCccaaacaaacagacacacagacgaaCCTCACGGACATACTGCCGAACGACGACCGCTCGCGCATTTGCAACATATGCGGAGAAATCTTCCAACACTTTTACTATCTAGAGGAACATCTGAAAAGTCACGGCTCAAAAATAGCTTTAGAAGACCTAAATAACGAAGAGGAAAAGAAACATATCTGCAAAATATGCAACAAAGGCTTCAAACTGCACTACTATTTGAAACTACACAGttttacacacacgaaagaaAAGCCTTTTATATGCCAGCAGTGCGGTAAAGGCTTTATTACACGTGGGAAGTTGAAGAGACACTTGGAAACGCACACGGGGATAAAGAAGTACCAATGTCACATTTGCTGTAAGTTTTTCACCAGAACCAGTTATTTAAGGATTCATGTGAGGACGATACACGGGACTCAGGACTATAATTTTAGGCTGGGGAAGGAGTATGGTAATGGGGAAGGGGAGTCTATGGATGTGTATTAA
Protein Sequence: MNINIEVDPLSNYEYPYDYNTHPNPYGNVQPVKQEQPMINNAFFQHFMDISYRNNDKQYLINPNQYQEKQYTDLHAGGNINNGNVSNENSNNDLQNPPPIPKEEDVKPLINPKNIKKEKGRKSSYFSEKILDKDFKFFGCSVCDISFALQGELDQHVTIHKDRITSYDLKIKNQKKRKNMKKEQKKKKKLQKDVKVEGKKDTVFEIEIKPEDGYIGNEKASEFNENNGNKNENNENDSTNNGNTPNVDNDSKTDVKEVKEKLEEKLENAKAKEQTDAEKNNLEKIYKCFACKKQFSLSYYLKLHVRSHTDEKPYPCNVCGQSFITASKLGRHNKRMHLSVRYQCRICYRFFSKFECLTRHFDKKHPDDKLEGEPYDFNAILPYLKELEEQLKEKAEEATKTKSEDLWDGWPAPIDNGLTTDKTEDALDRSMEPDEKPVEVLVHEDMGHVVIKKEEEEEPYPEFAAVKDSDSLKSEKEDVYSSHFGDYRDDDDKDGGFGGEVKGDSVGGVKDDRFKTEEDDGNISDDNYFPSGTWVPPTPKVEIDDKPKRRKKSDPPLKCDICNKKISTITYMRIHMRTHTGEKPFKCYICERGFITSSKLHRHVLTHAEAWEGNLNTEVKGELETDIKDEEGSDKKKKNKKTDKNIRAKRAKAEFVAKTKSEAKKSRRWQHTCQFCHRKFLHAETLQVHKKSHEGEELVYKCHYCLEPQPDEATLLQHETTHTGPSPYQCVECGKKYRKREAMIYHKKQHSSDKMFYCEVCLKSFTAQCKLQRHLLSHSEKKYVLRYECPVCAHMFHTKYHIQMHLATHQKEGLIQEENRNDILAMVLQNARKFPKQTDTQTNLTDILPNDDRSRICNICGEIFQHFYYLEEHLKSHGSKIALEDLNNEEEKKHICKICNKGFKLHYYLKLHSFTHTKEKPFICQQCGKGFITRGKLKRHLETHTGIKKYQCHICCKFFTRTSYLRIHVRTIHGTQDYNFRLGKEYGNGEGESMDVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00013368;
90% Identity: -
80% Identity: -