Basic Information

Insect: Acrobasis consociella
Gene Symbol: -
Assembly: GCA_963555685.1
Location: OY743105.1:11897312-11905079[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.39 33 6.1 0.0 2 23 185 207 184 207 0.91

2 14 9.9 8.4e+02 1.7 0.6 5 23 216 234 208 234 0.93

3 14 0.12 10 7.7 0.0 2 23 269 291 268 291 0.92

4 14 1.4 1.2e+02 4.4 0.3 5 23 301 319 298 319 0.91

5 14 3.3e-05 0.0028 19.0 1.7 1 23 352 375 352 375 0.96

6 14 1.1 95 4.7 0.2 5 23 384 402 383 402 0.94

7 14 0.0016 0.14 13.7 2.3 1 23 408 430 408 430 0.97

8 14 1.6e-05 0.0013 20.0 2.0 1 23 438 460 438 460 0.98

9 14 2e-05 0.0017 19.6 0.4 1 23 469 492 469 492 0.98

10 14 0.00032 0.027 15.8 0.2 1 23 498 520 498 520 0.97

11 14 1.7e-05 0.0015 19.8 5.4 1 23 526 548 526 548 0.98

12 14 0.00034 0.029 15.8 0.6 1 23 553 575 553 575 0.98

13 14 0.00033 0.028 15.8 6.4 1 23 581 603 581 603 0.97

14 14 0.00023 0.02 16.3 2.3 2 23 610 632 609 632 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.39	33	6.1	0.0	2	23	185	207	184	207	0.91
2	14	9.9	8.4e+02	1.7	0.6	5	23	216	234	208	234	0.93
3	14	0.12	10	7.7	0.0	2	23	269	291	268	291	0.92
4	14	1.4	1.2e+02	4.4	0.3	5	23	301	319	298	319	0.91
5	14	3.3e-05	0.0028	19.0	1.7	1	23	352	375	352	375	0.96
6	14	1.1	95	4.7	0.2	5	23	384	402	383	402	0.94
7	14	0.0016	0.14	13.7	2.3	1	23	408	430	408	430	0.97
8	14	1.6e-05	0.0013	20.0	2.0	1	23	438	460	438	460	0.98
9	14	2e-05	0.0017	19.6	0.4	1	23	469	492	469	492	0.98
10	14	0.00032	0.027	15.8	0.2	1	23	498	520	498	520	0.97
11	14	1.7e-05	0.0015	19.8	5.4	1	23	526	548	526	548	0.98
12	14	0.00034	0.029	15.8	0.6	1	23	553	575	553	575	0.98
13	14	0.00033	0.028	15.8	6.4	1	23	581	603	581	603	0.97
14	14	0.00023	0.02	16.3	2.3	2	23	610	632	609	632	0.96

Sequence Information

Coding Sequence: ATGAGTGTGAGAGAGTTATGTCGACTATGTGCAAAAAAAGAAGAGTTAACTAAGGACTTATTGGACAGTAACAACAAAAATGTACTGAAGTTGATACAAGATCTAATGCAAATTAATATCACTGAAGGTGATAATTTGCCTACTAACGTATGTTTGAATTGTGAAGAAAGGATTGTATCATTTCAGCTATTCATTTTAGAATGCTATAAAGTTCAAGAACAGTTTAAGAAAATATGTTCTGAAAATGTCTCTGTTAAGATTGAAGAAGATATCCTAGATCTTGGGCATTCAATCATAAAATCAGAGGTAAAAGATGAATTAAGTGCAGAGGATATTGTGTTATGTGCTATCAACAATGATGCTTCTATGTCAGAATATGAAGGTGGGGACTTCGATAATTTAGACGCCGACAAttctgatgaagatgatgatgggGACGATGTTACACTGGCTGAGCTTAAAAAAGTTAAGGTTGAGAAGAAAATGCCTTCTCAAGAGATGACACAACTTCTAAAGAAGCCTCACTTGAAAATAAAAGACTTTGTGAAaaTGGAGTGTGATATGTGCGGTTTCAAAGGAAAGTCTTGGGTTGTGTTACAAGATCACTACTCAGGAATACACCAAAGCCAACTCACTGTTCATTGCATATGTGGATTTAGTATCAAATCAAAAAGTATTTTGTATAAACATGTGCTGGAACACAAAATGGAGAGTGAAAAATTGATCAATAAAACTGAAGATGATGGGGACATGCAAACTGATCTTAATTATTGTGATCTTAAAGCAAAGCATTTTGTGAAACTGGTGTGCAAAATATGCGGGGAAAAAGCAAAAACATGGGCAATACTACAGGAACATTATACAATAATTCACCAAAGTAAACTGATTGTCTCATGTATATTATGTGGCTTTAGTATTAAGTCTAAAAGTGTGTTGTATAAACATGTGTTGGAACATAAAATGGAAAGCGAGACCTTAAGTAAAAAAGAGAGAGAAATGGAAAAACAAACTGATTCGGATTATTGTAATCTGAAAGTAAAAGATTTTGTTGATTTTTCATGCAATAATTGCAATAGAAAGTATTCAAGCTGGTATAGTTTGAAATCACATACTCTGTCTGCACATAAGACACAGCCCATGGTCCGATGCATATGTGGTATTTCTCTTACATCGAAAACAGTTCTATACAAACATGTCCAGGACcacaaaaatccaaattcattCTGTTGTGATAAATGTCCAAGAATAACGAAAACACTGGAGGCCCTTAATAAACACAAAATGATGCATGTACCGAAGGCTGACCGAAAGTTTTACTGCAGTTCTTGTGACAAAATATTCAATTCAAAGGACAGTTTGAAATCTCATGAAAGATCACACATACCtatagaagaaagaaaaatttaccGTTGTCCAATATGTGATATGAAGTTTACAACCCGCTCGTCCGCGGCGTCGCACAAGCGCGTGGTGCACGACAAGATCAAGAGCTACGTGTGCGACCTGTGCGGCTACGCGTGCGGCACCAACGGCGAGCTGCGCCAGCACCGCGCCATCCACAGCGACGACAAGCCTTTCGTGTGCAGAAAATGCTATAAATCGTTCAAAACGCATTCCAACCTGTCGACGCACATGGACACGCACGAAGAGACGTCGTACACGTGCGGCGTGTGCAGCCGCGTGCTCAACAGCCGGCGCACGCTGCGCAAGCACCTGCTGGTGCACGAGGAGCGCTGCAAGCACGTCTGCTCTTTCTGCCACAAAGCGTTCAAGCGGAGACAGACCTTGAAGGTCCATTTGTATACACACACGGGAGACAAGCCCCTGACGTGCAAGTGGTGCGACGAGCGGTTCGCGTACGCGTCGACGCTGCGCTCGCACCGCATGCGCTGCCACCCCGACAAGATGCCCGCGCAGACGCAGCACCAACAGAGCGCCGCCTACCGACAGTACGCGCACATTCCTCCGGAGGAATACATCAAGAGCGACTTGGCAGCTATCGGGTTAGAAAAGAATCCCACAGAGActatgtaa
Protein Sequence: MSVRELCRLCAKKEELTKDLLDSNNKNVLKLIQDLMQINITEGDNLPTNVCLNCEERIVSFQLFILECYKVQEQFKKICSENVSVKIEEDILDLGHSIIKSEVKDELSAEDIVLCAINNDASMSEYEGGDFDNLDADNSDEDDDGDDVTLAELKKVKVEKKMPSQEMTQLLKKPHLKIKDFVKMECDMCGFKGKSWVVLQDHYSGIHQSQLTVHCICGFSIKSKSILYKHVLEHKMESEKLINKTEDDGDMQTDLNYCDLKAKHFVKLVCKICGEKAKTWAILQEHYTIIHQSKLIVSCILCGFSIKSKSVLYKHVLEHKMESETLSKKEREMEKQTDSDYCNLKVKDFVDFSCNNCNRKYSSWYSLKSHTLSAHKTQPMVRCICGISLTSKTVLYKHVQDHKNPNSFCCDKCPRITKTLEALNKHKMMHVPKADRKFYCSSCDKIFNSKDSLKSHERSHIPIEERKIYRCPICDMKFTTRSSAASHKRVVHDKIKSYVCDLCGYACGTNGELRQHRAIHSDDKPFVCRKCYKSFKTHSNLSTHMDTHEETSYTCGVCSRVLNSRRTLRKHLLVHEERCKHVCSFCHKAFKRRQTLKVHLYTHTGDKPLTCKWCDERFAYASTLRSHRMRCHPDKMPAQTQHQQSAAYRQYAHIPPEEYIKSDLAAIGLEKNPTETM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01302636;
90% Identity: iTF_00013353;
80% Identity: -