Aeri012465.1
Basic Information
- Insect
- Acraspis erinacei
- Gene Symbol
- nfxl1
- Assembly
- GCA_035041075.1
- Location
- JAWWLR010000034.1:37929256-37940508[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.52 5.3e+04 -3.2 1.1 15 19 108 112 107 112 0.81 2 19 0.071 7.2e+03 -0.4 0.8 4 10 143 149 142 149 0.95 3 19 3.3e-08 0.0033 19.8 17.3 1 19 157 174 157 174 0.99 4 19 1.2e-05 1.2 11.6 15.9 3 19 212 228 200 228 0.83 5 19 0.0013 1.4e+02 5.1 11.5 3 19 265 282 257 282 0.87 6 19 8e-05 8.1 9.0 11.3 1 18 318 335 318 336 0.97 7 19 0.00039 39 6.8 7.0 1 12 370 381 370 381 0.94 8 19 0.41 4.2e+04 -2.9 1.3 6 10 391 395 391 395 0.98 9 19 5.9e-08 0.006 19.0 13.5 1 19 401 419 401 419 0.92 10 19 1 1e+05 -4.4 1.4 5 10 447 452 447 452 0.90 11 19 0.00024 25 7.4 7.4 9 19 467 477 465 477 0.90 12 19 0.00025 25 7.4 8.0 1 12 487 497 487 497 0.95 13 19 0.42 4.2e+04 -2.9 5.8 14 18 530 534 530 535 0.89 14 19 0.78 7.9e+04 -3.8 0.6 9 12 552 555 552 555 0.77 15 19 5.2e-05 5.3 9.6 6.6 1 12 571 582 565 582 0.91 16 19 0.38 3.9e+04 -2.8 1.7 6 10 598 602 597 602 0.88 17 19 0.00035 36 6.9 13.9 3 19 611 627 610 627 0.92 18 19 1.6e-07 0.016 17.6 9.9 1 16 672 686 672 692 0.86 19 19 0.35 3.6e+04 -2.7 0.4 5 10 721 726 721 726 0.92
Sequence Information
- Coding Sequence
- atgaggaaattcagGCGAGCCCAGGCGGAAAATCAAGCAGCCATTCAAAAACATTTAGTTGCAAATGATTTGTTGGATTCCTCAAGTCGAAGGTGGCGATGCACAGAAGACACTGTNNNNNNNNNNACACTTTCGTATTTAAGCGACGTTTTGCAATCTGGAGGAGCAATTTGCTTAATTTGCATTTCGTCTGTGAAGAAAACGGATGCGATATGGAACTGCGTTAAGTGCTTTACTTTCATGCATTTACCTTGCATTCAACATTGGATACGCGACAGTTTAAGTTACAAACGGGAAAAGGAAATCACTCCACAGTGGGCTTGTCCGAAGTGCCGAACTGATTACCAAGAAAACGAAGTGCCGACCAAGTACCTTTGCTTCTGTGGAAATTCAGTGGACCCAGCCTACCAACCCTGGTCGATTCCACACTCCTGTGGCGAAACTTGTGGCAAATTACTTCAACCAAATTGCGGACACAAATGTGTTCTTCTCTGTCATCCAGGACCCTGTCCGCCTTGTCCAAAAACCGTATCTGCAAAATGCTTCTGTGGCAAAGAACCAGCACGTCCTCGTCGTTGCAACGCCAAAGAGTGGAGTTGCGGGAGCATCTGTGGAAGAAACTACAAAACGTGCAACCACAGCTGTCAGGAAGAATGCCACAAAGACGATTGTCCTCCATGTACCGAAAATGTGCCCGCTTCCTGCAATTGCAACTCAAAAAGCGAGTCTCGGCCTTGCAACCAATCTGCCTGGTTTTGCGACAAACCCTGTGGTAGACAATTTCCCTGCAAGGTACATATCTGCGAAAGTTTTTGCCACAAACCCGGAGACTGCAAAGGCTGTCCCATTGAAAAGAACAGAACATGTCCCTGTGGAAAAAAGAAATACGCCGTTTCTTGCAAACAGGAACTTGTTCCGACTTGTGGTGATACCTGCGGTAAGCTTTTAGACTGCGGTCGTCATGATTGCAACATGAGATGCCACACGGAAAAATGTGGACAGTGTCTCGAAATGGTGATTAAAACCTGTCGCTGTGGTAGCTTCCAGAAAGAGATGGCTTGTACGAAAGAATTCCACTGCAGTAGGAAATGCACCCAGTGGAGACTTTGCGGAAGACATTATTGCAATAAAAAGTGTTGCGACTGCTTGATCAAAAATACGTTCAATGTCTGCGAGAGAGTTTGCGACAACCAGCTGAATTGCCAGAAGCACAAATGTGCGGCTCCTTGTCACAGCGGACCTTGTTATCCTTGCACTCGAACCGATGTGATTCAGTGCAGATGTGGAAGTAACAAAATCACAGTTCCCTGTGGATCTGTTAAGAGAATCAAGCCTCCGACTTGCAACAAGCGTTGCAAAATTCCACCAATTTGTCATCACCCGAAACGAGAGTCGCACAAATGCCACCAGGGTTATTGTCCACCTTGTAAGAAAATTTGTGGATTGGTTCATAAGAGATGTGGCCATACTTGTCCTGCGACTTGTCATACCAAAGTTTGGATGAAGGTCAAGATTAATGGAGTTAATTCTCAGCCGACTGCACCTTGGGACATTTGTAGAAAGGAGCAATGGAAGCTGCAGACACTTCCTTGTCCTCCTTGTGAGGTTTCGGTGATGGTAACTTGTTTGGGAGGACATGAGACTTTACCCTGGCCTTGTCATAAAGCGGTTTCGAATTCCTGTTTGAGGGAATGTGGGAGATTGTTGGCTTGCACGAATCATAACTGTGAGAAGCTTTGTCATAAAGTGGATTTGGGAGGAGATGGGAGTGAAGAGGATAGGTGTATGGAGTGCGAGAAGCCCTGTGCTTTTCCTAGACCAGAAGGATGTACCCATCCGTGTCTTAAGGTTTGTCATCCAGCTCCTTGTGCTCCTTGTAAGCAGCTGGTTAGAGTTGGATGCCATTGTGGAATCAATTTCCTGTATAAAAGGTGTGCTGAACTCACTTCGGCGACGGAAAAACAAAAGGAGGAAATGCTCAAGTGTGGGAATCAATGTCCGAAAAATTATCTCTGTGGTCATCGCTGTATCGACATTTGCCATCCAGGTCCATGTTTAAATGAAGAGTCGTGTAACAAGAAAGTCAAACTTCTGTGTAAGTGCAAGCGACTTAAAAAGGATTTTTCGTGTATTCAGATTCGCAAGGGTCAAGGCGTCGTCAAATGTGACGACGTCTGTCGCCAGAAAAAGGAAGAATTGGAACGAGCTCGCGAGAtcgaaatagagaaaaaaaataaggaGGAGGAACTCCGCAATCAAAGGGAGatagaaatgtttgaaaagaaaTTCAAACCTCGTCGTAAAATCAAAGATAGATCGCACAACAACAATAAGTCAAAATCCGGTTCGAAAAACTGGATAAAATATTCGGTAATTGCCATTATTTTGGCGATTGTAGCTTTTGCGATAACATATTTCAATacttatgtttaa
- Protein Sequence
- MRKFRRAQAENQAAIQKHLVANDLLDSSSRRWRCTEDTVXXXTLSYLSDVLQSGGAICLICISSVKKTDAIWNCVKCFTFMHLPCIQHWIRDSLSYKREKEITPQWACPKCRTDYQENEVPTKYLCFCGNSVDPAYQPWSIPHSCGETCGKLLQPNCGHKCVLLCHPGPCPPCPKTVSAKCFCGKEPARPRRCNAKEWSCGSICGRNYKTCNHSCQEECHKDDCPPCTENVPASCNCNSKSESRPCNQSAWFCDKPCGRQFPCKVHICESFCHKPGDCKGCPIEKNRTCPCGKKKYAVSCKQELVPTCGDTCGKLLDCGRHDCNMRCHTEKCGQCLEMVIKTCRCGSFQKEMACTKEFHCSRKCTQWRLCGRHYCNKKCCDCLIKNTFNVCERVCDNQLNCQKHKCAAPCHSGPCYPCTRTDVIQCRCGSNKITVPCGSVKRIKPPTCNKRCKIPPICHHPKRESHKCHQGYCPPCKKICGLVHKRCGHTCPATCHTKVWMKVKINGVNSQPTAPWDICRKEQWKLQTLPCPPCEVSVMVTCLGGHETLPWPCHKAVSNSCLRECGRLLACTNHNCEKLCHKVDLGGDGSEEDRCMECEKPCAFPRPEGCTHPCLKVCHPAPCAPCKQLVRVGCHCGINFLYKRCAELTSATEKQKEEMLKCGNQCPKNYLCGHRCIDICHPGPCLNEESCNKKVKLLCKCKRLKKDFSCIQIRKGQGVVKCDDVCRQKKEELERAREIEIEKKNKEEELRNQREIEMFEKKFKPRRKIKDRSHNNNKSKSGSKNWIKYSVIAIILAIVAFAITYFNTYV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00980613;
- 90% Identity
- iTF_00201357;
- 80% Identity
- -