Aeri035848.1
Basic Information
- Insect
- Acraspis erinacei
- Gene Symbol
- bab1
- Assembly
- GCA_035041075.1
- Location
- JAWWLR010000154.1:766056-771264[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-16 3.3e-13 51.5 0.0 2 43 29 71 28 73 0.94 2 3 4.3 1.3e+04 -1.6 1.4 6 15 151 160 149 163 0.88 3 3 7.2 2.2e+04 -2.3 0.0 19 27 196 204 195 209 0.78
Sequence Information
- Coding Sequence
- ATGTGGCAAAAGTGCTGGAACACCAATCAGAGCCTGGTGCACAACCTTCGCTTCCGAGAAAGGGGACCACTCAAGTCCTGGAGACCAGAACCCATGGCGGAGGCGATCTTCAGCGTACTCAAGGAAGGACTGTCACTTAGTCAAGCTGCCAGaaaatacgaCATCCCATATCCCACCTTCGTTCTCTATGCAAACCGAGTGCACAATATGCTGGGGCCTAGCGCCGACGGCGGGGCCGATCTTCGACCAAAGGGTAGAGGGAGGCCTCAGAGGATTTTGCTAGGAGTCTGGCCTGATGAACATATACGAGGAGTGATTCGGGCAGTCGTTTTTCGTGATGGACACTCGCCTCACATCGTCAAAGACGAACCAACCACGATGTACCCTAGCTTGGCAAATTACGCTGCCTGCAATGGACCGGAAGGTGCAGTCAGTCCCGGTGCAGCTGCAGCAGCTGCAGTTGCAGCGGTCGCACAAGGTCTGAGGCACCAGATGTGCAGTATGGTGGCAGCGGCGCATTCCCAGCAGCACGACATGCTTGCGACGAATCTCTCGACAAGTCTCTCCTCGAATCTTCAGGCGGCGATGCAGCAGGCGAGCCAGCACCACAATAACAACAACTCAAGTGGCCCCGGAGGCAACAGCAATAATAACAACGGCAATTCACCCCTGAACCTGGGTCTAGCGAGTCCAGGATCCGGACCACCCGAGAGTCCGCTAGAAAGTCCCCTCGCGAGTCCCCTTGGGCCCCTAATGGATCCAGGACACATACCCAGTAGTGTTGAAGTCGGCATCGGCGTCAGTGGAATGACGTACAAACCGGCCCGGAGCTTCGTCAGTCCTCGGCCGGAGAATCTCTTCCAGGAGGACATAGCCGACCTTGTCAAAAGTCCTCACATGAAGGAAAAGGACAAAATCGCGGTGAAACTGGAGCCTCTCACGGACTCTCGCTGCGAGTAA
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPEPMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHIVKDEPTTMYPSLANYAACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMLATNLSTSLSSNLQAAMQQASQHHNNNNSSGPGGNSNNNNGNSPLNLGLASPGSGPPESPLESPLASPLGPLMDPGHIPSSVEVGIGVSGMTYKPARSFVSPRPENLFQEDIADLVKSPHMKEKDKIAVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00227880;
- 90% Identity
- iTF_01392685;
- 80% Identity
- -