Alat014693.1
Basic Information
- Insect
- Acleris laterana
- Gene Symbol
- -
- Assembly
- GCA_963966035.1
- Location
- OZ014444.1:1825972-1840350[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-18 1.1e-13 52.3 14.0 1 42 121 162 121 170 0.95 2 2 0.012 4.8e+02 1.0 0.5 213 238 186 210 174 211 0.63
Sequence Information
- Coding Sequence
- ATGGGCCGCCGCCAATCCAAAAGTGCAACGCCTGACAATAGCGACGACGAGAGCGGAGACGAGTTCACGGACGCCGACTTTGGCGACTCCGACGATGGCACACACGTAGAACGTAGCGATAACTCCAACACCTCCCTCATCCCAGTCAATGAAACGGTGAACGAACAAGTCATGGAGATAGCTTACGGCGCTCGTAATGGTTTCGATGAACACGATCATACTAAGCTTAACGGGCACAGAAACAGTGATAGTGATTTGGAGTGCCGCAGCAACGGAGACACGATGCCTGAACTCCGGAGGGACTCCCATGGCGACCAGAATCCGTCCATCGTCGGCATTCTAGGTGGCCAGCAGGATCATGCGGAGCAGCGTCtagcggcgcggcgcgcggctCGGGCCGAGGCGCGTGAGATACGCATGCGCGAGCTGGAGCGGCAGCAGCGCGAGCAGGAGGACCATGCGGACAAAGCCTACGATATGTATGCCGCTTTGGTTTGTTTTCAGGAAGTCGTTGACTTCTGGGCCGCAAGGGAAGCACTAAACCGAGTCGAGGAGTTGGAGACGGAGAACAGCCACCTGACCAAGCGGCTGGACAAGCTCAAGAACGCCAAGTCCGCGCTGCTCAAGGAGCTGTGA
- Protein Sequence
- MGRRQSKSATPDNSDDESGDEFTDADFGDSDDGTHVERSDNSNTSLIPVNETVNEQVMEIAYGARNGFDEHDHTKLNGHRNSDSDLECRSNGDTMPELRRDSHGDQNPSIVGILGGQQDHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAALVCFQEVVDFWAAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -