Alat017484.1
Basic Information
- Insect
- Acleris laterana
- Gene Symbol
- pol
- Assembly
- GCA_963966035.1
- Location
- OZ014446.1:12971646-12980258[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.98 6.6e+03 -2.0 0.0 81 121 59 96 50 120 0.67 2 3 2.6e-08 0.00017 22.7 0.0 1 30 599 628 599 637 0.89 3 3 4.8 3.2e+04 -4.2 0.0 64 81 697 714 695 724 0.67
Sequence Information
- Coding Sequence
- ATGTCTTCGAGTGACCAGGACTCCATGAGTGAGGCGGCCAGCTCGCCATACCAGGACTCCCCCAGAAGCTCACCGTCCCAGCAAATGCCACAGTTGGCGCACTGCTTTACGGAGTTGACTTGCGCTGAAATCAATGGCTACCCTTCAGGGTTACAGGCTGCTTCGGTCGTTTGCAAATCAGACATTACGGACCACGACATGATTGCAACGGGAGTGAGCATTAAGACTGCAAAGAAGGCTCAAAAAAAGCGTCTGGTTAAGAGGATTGACATCAAAGCTGTGGAGGATGACCTGGGTAAGCTGGACTGGAGTAGCGTTACAAGCTCAGGCACAGTGGAGGAGGCTGTTAAGGCTTTTAACCAGTTGTTTTTTGAAACTACAGCGAGTCACACTGCCTATGTTCCAGTCAGTCGGGCTAAGTTTGCGCTTAAATCTTGGATGACCCCTGGTCTTATTCGCTGCTCAAGACATAGAGATCGTCTCCATGCGAAATGCCGCAAAAATCCTAATGACTTAGTTCTTCAACAGACTTACACCCgctataaaaacttttataaTGATCTGCTACGTAAACTGAAGAATAAGCACGATTCAGATGAACTGGAACAAAATAAGAATAATCCAAAAAAACTTTGGAATTCAATTAGAAGTATAACATTTACCAAGAAAAACGTAGAGAGTCCGATAGAACTTACCCAATCGAAGGGATCTGTCACGGAGTCGCTTGATTATTGTAACCAGTTCTTTGCGAATGTTGGTTCGACTCTCGCTAATAACATACTGGCAACTGACAATAAGACCCAGGAGGATCTTGCGCGCGAAGTGTCCTCAAATGTATCACCATTGCAGTCTCTTTTCTTTTCTCCGACCAACGAATTTGAAGTCGAGTCTTTAATTGATGGTCTAAAGCTTGATAGCGCGCCTGGTCTTGACGGAGTCACAAACCGGTTACTGAAGGCAACTAAGAGCCACATTATTGCACCACTTACACACATATATAACCTTAGTCTGTCCGAAGGAACTTTCCCAGTTTCATGGAAGGAGGCTGCCGTCATACCGATACACAAGGCCGGAGATAAATCTATTCCCAATAACTACAGACCAATTTCATTGCTTGGGGCATTTTCTAAAATTCTGGAGAGACTGGTTAGTAAGCGGTTGGTCAACTTTCTGGATATTAACAACACCATTTCGGAACGCCAGTTTGGCTTCCGCGCAAAAAAGTCGACGGAGGATGCTGTAGTGCTTATGACTGGGCTAATTTCGGATTACTTGGACCATAATAAGGCCTGCCTTGGTATTTTCTTGGACCTCGCCAAGGCGTTTGACACCGTGTCCATTCCTATTCTCCTAAAAAAGCTGGAACTCGTTGGTGTCAGAGGAACCGCTCTAAACTGGTTCACCACTTACCTGACAGGCCGTACGCAGTGTGTAAAAGTAGATCAGGACTTGAGTAATCGCAATGATATCAATTTCGGAGTCCCACAGGGCAGTGTCTTGGGTCCAACTTTGTTCATAATTTACATCAATGACATTCTCTCCACTCAAATTGTGAATGCTGACGTTGTTTGTTATGCTGATGACACAGCAATACTTTTCCATGCAGATACCTGGACCCAAGTGGCCAAGTCTGCAGAACAAGGTATGAGTGTCATTGCTGGCCTTCTGAAGAGTAACTTGTTGACACTTAATGTCTCTAAGACGAAATTCTTGTGCTTCCATAAGACCATAGTTTCTGCTCCCAACGTGTTACCTAGGATAGCAATTCACACCTGTAACCAAAacaGGCCCTATTTGCGTATCGTCGAGCAGCCGCAGAACCATTTCCGGTTCCGGTATAAGAGCGAGATGGTGGGCACCCACGGGTGCCTGTTGGGAAAAACAATTGGTGAACTTCACGAAACGCGCGCTGATTCGGTGTCGGCTGGCGCAGCACATGAAGGGCGACGAGCACCCGCACCAGCTGTTGGAGGACGAGCAGGAGGACCGCGACGTGAGCGCCGTCGTCGAGCCCGGCAGCTACCGAGTCGCGTGAGTCACCTTTGCACGGACAGGAGCCGGGGCCCGCTGGTGCAAGGCCTGGAGGGCGAGCAGCACCCGCACCAGCTGCTGGAGGACGAGCAGGAGGATCGTGACGTGAGCGCCGTCGTCGAGCCCGGCAGCTACCGAGTCGCgccccaggAGCCGGGGCCGGCTGGTGCAGCACCTGGAGGGCGAGCAGCACCCGCACCAGCAGCTGGAGGACTGCGACGTGAGCGCCGTCGTCGAACCAAGCACCTACCGAGTCGCGTGAGTCACCTCGGCAGGGACACGAGCTTGGGCCGGCTGGTGCAGCACCTGGAGGGCGAGCAGCACCCGCACCAGCAGCTGGAGGACTGCGACGTGAGCGCCGTCGTCGAGCCAAGCACCTACCGAGTCGCGTAA
- Protein Sequence
- MSSSDQDSMSEAASSPYQDSPRSSPSQQMPQLAHCFTELTCAEINGYPSGLQAASVVCKSDITDHDMIATGVSIKTAKKAQKKRLVKRIDIKAVEDDLGKLDWSSVTSSGTVEEAVKAFNQLFFETTASHTAYVPVSRAKFALKSWMTPGLIRCSRHRDRLHAKCRKNPNDLVLQQTYTRYKNFYNDLLRKLKNKHDSDELEQNKNNPKKLWNSIRSITFTKKNVESPIELTQSKGSVTESLDYCNQFFANVGSTLANNILATDNKTQEDLAREVSSNVSPLQSLFFSPTNEFEVESLIDGLKLDSAPGLDGVTNRLLKATKSHIIAPLTHIYNLSLSEGTFPVSWKEAAVIPIHKAGDKSIPNNYRPISLLGAFSKILERLVSKRLVNFLDINNTISERQFGFRAKKSTEDAVVLMTGLISDYLDHNKACLGIFLDLAKAFDTVSIPILLKKLELVGVRGTALNWFTTYLTGRTQCVKVDQDLSNRNDINFGVPQGSVLGPTLFIIYINDILSTQIVNADVVCYADDTAILFHADTWTQVAKSAEQGMSVIAGLLKSNLLTLNVSKTKFLCFHKTIVSAPNVLPRIAIHTCNQNRPYLRIVEQPQNHFRFRYKSEMVGTHGCLLGKTIGELHETRADSVSAGAAHEGRRAPAPAVGGRAGGPRRERRRRARQLPSRVSHLCTDRSRGPLVQGLEGEQHPHQLLEDEQEDRDVSAVVEPGSYRVAPQEPGPAGAAPGGRAAPAPAAGGLRRERRRRTKHLPSRVSHLGRDTSLGRLVQHLEGEQHPHQQLEDCDVSAVVEPSTYRVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -