Basic Information

Insect: Acleris holmiana
Gene Symbol: -
Assembly: GCA_949316455.1
Location: OX438790.1:1509222-1511504[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0017 1.4 10.3 1.9 17 43 6 29 1 30 0.91

2 16 0.0031 2.5 9.4 0.0 18 43 66 88 59 89 0.91

3 16 0.024 20 6.6 1.7 17 43 96 119 92 120 0.90

4 16 0.018 15 7.0 0.5 18 44 127 150 126 150 0.92

5 16 0.00099 0.81 11.0 0.7 15 43 154 179 152 180 0.89

6 16 0.013 11 7.4 0.6 18 44 186 209 181 209 0.90

7 16 0.052 43 5.5 0.4 19 44 239 261 235 261 0.90

8 16 0.73 6e+02 1.8 0.2 22 43 287 308 276 309 0.77

9 16 0.071 58 5.1 0.0 15 44 342 368 337 368 0.76

10 16 0.46 3.8e+02 2.5 2.0 12 43 387 415 382 416 0.81

11 16 0.55 4.5e+02 2.2 6.0 4 29 408 433 405 445 0.77

12 16 0.006 5 8.5 2.6 12 43 445 473 436 474 0.78

13 16 0.14 1.1e+02 4.2 0.8 17 44 479 503 475 503 0.85

14 16 6.6 5.4e+03 -1.2 0.2 34 43 553 562 539 564 0.68

15 16 6.2 5.1e+03 -1.1 0.6 13 29 565 581 560 594 0.74

16 16 0.00013 0.1 13.9 2.2 18 44 606 629 590 629 0.78

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0017	1.4	10.3	1.9	17	43	6	29	1	30	0.91
2	16	0.0031	2.5	9.4	0.0	18	43	66	88	59	89	0.91
3	16	0.024	20	6.6	1.7	17	43	96	119	92	120	0.90
4	16	0.018	15	7.0	0.5	18	44	127	150	126	150	0.92
5	16	0.00099	0.81	11.0	0.7	15	43	154	179	152	180	0.89
6	16	0.013	11	7.4	0.6	18	44	186	209	181	209	0.90
7	16	0.052	43	5.5	0.4	19	44	239	261	235	261	0.90
8	16	0.73	6e+02	1.8	0.2	22	43	287	308	276	309	0.77
9	16	0.071	58	5.1	0.0	15	44	342	368	337	368	0.76
10	16	0.46	3.8e+02	2.5	2.0	12	43	387	415	382	416	0.81
11	16	0.55	4.5e+02	2.2	6.0	4	29	408	433	405	445	0.77
12	16	0.006	5	8.5	2.6	12	43	445	473	436	474	0.78
13	16	0.14	1.1e+02	4.2	0.8	17	44	479	503	475	503	0.85
14	16	6.6	5.4e+03	-1.2	0.2	34	43	553	562	539	564	0.68
15	16	6.2	5.1e+03	-1.1	0.6	13	29	565	581	560	594	0.74
16	16	0.00013	0.1	13.9	2.2	18	44	606	629	590	629	0.78

Sequence Information

Coding Sequence: ATGGCGTCCTACGAGTACGTCTGCGACTATTGCAGCCGAACATTCACAAGGAAATACAACTTGCGAACACATATAGAAAACTGCCATATAAACTCCTCTTGCAGCTGTGAAATATGTGACCAGAGATTTGGGAGTCCTGCTGGCTTGCAATTACATTACAGCAGGGGTCACAATAGATTTTCTCAACCCTTCCCAGAGTGTGATATCTGCGGTCGCGTTTTTACTAGAAAGCAGAATGTGGTGTCCCATATGGTCACAGTACATTTGCAGGGTTGCGGACCGCAGATTCAGTGCTATATATGCTATAAGACCTTCACAACTGAGAGGAACTTGAAACGGCATATCAGTCAATTGCATAATCCAGAAGTTGAGTACCCAACTTGTGATTACTGCAAGAGGGTCTTTAGAGGGAAACATTCCTTGATAGCCCACATACAAGCCacacataatgttttcaaaggTATTATAAAGTGTGACATGTGTGATAAAGTATACACTAACAATAGGAACTTGAAGCGACACATTGAGATGTATCACGGAGAGAAGGAAGAGTTCAGGTGTGAATTGTGCCCTAAAGTTTACACGTCTAATCAGAGCTTGAGACGCCACGCCCGCACGCGGCATAATACTGAGGATTACAAATCTGATTTGAATATAGATCAAGATACTAACGAATATAACCCTTACGAGTATAACTCTCAACTAGAGTTCCCCTGTTCGTATTGCGAAAAACATTTCTCCGAAGAGCCAATGCTACGGCACCATGTTAAAACCGAGCATTCGTTTCAGATCTTCTATGAATACTGTAGGAGTTCTTTGTTGAAACAGACCAAGAAAGAGAAGACCGTGTATTACAAATGCGAGAGTTGCATCAATGCTTTCAATTCTGTATACGATTTGAAAGATCATATGAGAACAAGCCATGACAGAGAGTATTCTCTATCCACGTGCAACGTGTGCTTTACCAAATTTTACAGCAAAGAAACGATAAAAGAACACAAGAAAATATGCCTCCCGCCTCCAAATGTTAATTCTTGCAACTACTGTGATAAACTATTCACAGATATATCGAGTCTAGAATTTCATGTAAGAATATTTCATCCACAAGCACAAATCGCTGAAAACGATGTCACTTCGACTAACTTAGACGACGTGTCTGCAGAAGCTGGTGCTTTCAAATGCGTACATTGCGACCGGATGTATTATAGCGACCGATCGTTGAAGCACCACGTCAAACTCAAACATACTACAGACGAAGTAGTTGACTGCGGAGTCTGCGGTAAGATCTGCAACAACAAATACTATCTCGCGTCTCACATCAAAATCGTACACAACAACGACTCTTGGTCGAAATGTGACTATTGCGACAAACAATTCAAGTCGAAGAGAAACATCCGTCGGCATATCGAGTACACCCATTTGGGCATGCAGAGATACAAATGCATCGAGTGCGAAACGCTTTTCAAAGAGAAGCGGAGTTTACGGAAACATGTTAGAACGAAGCATCCAAACTCCACAATATTTCCTCAATGCCATATATGCTACAAACGGTTCGAATCAGCCAAGTCATGCAAGATACACCTGAAACTCTTGCATTCTTTCAACATGAATACATACCCTTGTGATCTCTGCTCGGTGTCCTTCAGTTCCAATGAAGCTCTGAACATACATCTTCAGACGAAGCATCTAGCTGAAGACCAGATCTTCAAATGCGAGCAATGCAACCTTGTCTTTACGGGGCAAGAGAAATTTGAACACCACAACGAAATGAGTCACGTGAATTTACTTCCCATCGTAAAACAGAAGGTTTTACCTCGCTGCATTATATGCATGAAAGATTTCAGCACCCGGAAGACCTTAAAGCGTCACATTAAGAAGTTCCACAATAACTTTGATCCCGAAGAGCTTGCTAGTTACGGTTCCAAGAATCGTATGCCGCTGGTCGAATGTGAGGAATGCATACATAATTTCAACGATGATTTCTATTTTGATGTCTATCAGAAGTTGAAGCATTTGAGAGACTCGATCATCTTCAAATGTGAGACTTGTTGCACTTCTTACGACTGCTTGGAGTATTCTATTCAGAGATATAAGGCGGCCAATTTCGAGGTGTCGAAAAGCAAAATGATTTTGAGCGAATTGTGTACCGCTGAAATGAGCGATGAAACTTCAAATAATAGCGGTTTCGGTTTCATGGAACCAGAGAGTACGACTGGTGACATTGTCAAGACGGAATCTATGGATATGGATCTAGACGTCAAACCTGAGGCTGTGTCACCATAG
Protein Sequence: MASYEYVCDYCSRTFTRKYNLRTHIENCHINSSCSCEICDQRFGSPAGLQLHYSRGHNRFSQPFPECDICGRVFTRKQNVVSHMVTVHLQGCGPQIQCYICYKTFTTERNLKRHISQLHNPEVEYPTCDYCKRVFRGKHSLIAHIQATHNVFKGIIKCDMCDKVYTNNRNLKRHIEMYHGEKEEFRCELCPKVYTSNQSLRRHARTRHNTEDYKSDLNIDQDTNEYNPYEYNSQLEFPCSYCEKHFSEEPMLRHHVKTEHSFQIFYEYCRSSLLKQTKKEKTVYYKCESCINAFNSVYDLKDHMRTSHDREYSLSTCNVCFTKFYSKETIKEHKKICLPPPNVNSCNYCDKLFTDISSLEFHVRIFHPQAQIAENDVTSTNLDDVSAEAGAFKCVHCDRMYYSDRSLKHHVKLKHTTDEVVDCGVCGKICNNKYYLASHIKIVHNNDSWSKCDYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSTIFPQCHICYKRFESAKSCKIHLKLLHSFNMNTYPCDLCSVSFSSNEALNIHLQTKHLAEDQIFKCEQCNLVFTGQEKFEHHNEMSHVNLLPIVKQKVLPRCIICMKDFSTRKTLKRHIKKFHNNFDPEELASYGSKNRMPLVECEECIHNFNDDFYFDVYQKLKHLRDSIIFKCETCCTSYDCLEYSIQRYKAANFEVSKSKMILSELCTAEMSDETSNNSGFGFMEPESTTGDIVKTESMDMDLDVKPEAVSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00680825;
90% Identity: iTF_00009318;
80% Identity: iTF_00009318;